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13_2_20cm_2_scaffold_255

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_2_scaffold_255_1
RBG_13_Bathyarchaeota_52_12_curated, Bathyarchaeota, Archaea

Not on your lists

comp(1..585)
DNA (585bp) protein (195aa)
sucC; succinyl-CoA synthetase subunit beta; K01903 succinyl-CoA synthetase beta subunit [EC:6.2.1.5] Tax=RBG_13_Bathyarchaeota_52_12_curated
Succinyl-CoA ligase [ADP-forming] subunit beta-1 n=2 Tax=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) RepID=SUCC1_ARCFU
sucC; succinyl-CoA synthetase subunit beta
13_2_20cm_2_scaffold_255_2
RBG_16_Archaea_50_20_curated, Archaea

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804..1319
DNA (516bp) protein (172aa)
Transcription elongation factor NusA n=1 Tax=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) RepID=Q8TXG0_METKA
nusA; transcription elongation factor NusA-like protein Tax=RBG_16_Archaea_50_20_curated
nusA; transcription elongation factor NusA-like protein
13_2_20cm_2_scaffold_255_3
RBG_16_Bathyarchaeota_57_9_curated, Bathyarchaeota, Archaea

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1327..2526
DNA (1200bp) protein (400aa)
Geranylgeranyl diphosphate reductase (EC:1.3.1.83)
Hypothetical conserved protein n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SUS4_9BACT
geranylgeranyl reductase Tax=RBG_16_Bathyarchaeota_57_9_curated
13_2_20cm_2_scaffold_255_4
RIFCSPLOWO2_12_FULL_Bacteroidetes_37_12_curated, Bacteroidetes, Bacteria

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2595..3725
DNA (1131bp) protein (377aa)
saccharopine dehydrogenase Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_37_12_curated
cap:CLDAP_29660 putative L-lysine 6-dehydrogenase id=8266064 bin=CD_OP8_4m species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=CD_OP8_4m organism_group=OP8 (Aminicenantes)
Saccharopine dehydrogenase-like protein
13_2_20cm_2_scaffold_255_5
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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4462..5229
DNA (768bp) protein (256aa)
Sporulation initiation inhibitor protein soj n=1 Tax=Desulfotomaculum hydrothermale Lam5 = DSM 18033 RepID=K8DZ73_9FIRM
Cobyrinic acid ac-diamide synthase; K03496 chromosome partitioning protein Tax=GWA2_Rokubacteria_70_23_curated
chromosome segregation ATPase
13_2_20cm_2_scaffold_255_6
Collinsella sp. CAG:398, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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comp(5672..6457)
DNA (786bp) protein (262aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:398 RepID=R6ZCC9_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDD43850.1}; TaxID=1262852 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" sourc
hypothetical protein
13_2_20cm_2_scaffold_255_7
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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comp(6778..8451)
DNA (1674bp) protein (558aa)
hypothetical protein
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_2_20cm_2_scaffold_255_8
RBG_16_Archaea_50_20_curated, Archaea

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comp(8919..9701)
DNA (783bp) protein (261aa)
Tax=RBG_16_Archaea_50_20_curated
13_2_20cm_2_scaffold_255_9
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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comp(9711..10970)
DNA (1260bp) protein (420aa)
Uncharacterized protein n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6ARD4_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:CDI05197.1}; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
hypothetical protein
13_2_20cm_2_scaffold_255_10
unknown

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11046..11315
DNA (270bp) protein (90aa)

This feature has no annotations

13_2_20cm_2_scaffold_255_11
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

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comp(11493..12554)
DNA (1062bp) protein (354aa)
Phosphate uptake regulator n=1 Tax=Metallosphaera yellowstonensis MK1 RepID=H2C835_9CREN
phosphate regulatory protein Tax=RBG_16_Thaumarchaeota_49_8_curated
phosphate regulatory protein
13_2_20cm_2_scaffold_255_12
Methanosaeta harundinacea, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(12675..13007)
DNA (333bp) protein (111aa)
Thioredoxin n=1 Tax=Methanosaeta harundinacea (strain 6Ac) RepID=G7WMW2_METH6
Thioredoxin
Thioredoxin {ECO:0000313|EMBL:AET64527.1}; TaxID=1110509 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaetaceae; Methanosaeta.;" source="Methanosaeta harundinacea (strai
13_2_20cm_2_scaffold_255_13
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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comp(13283..13495)
DNA (213bp) protein (71aa)
Tax=RBG_13_Bathyarchaeota_38_9_curated
13_2_20cm_2_scaffold_255_14
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(13559..15736)
DNA (2178bp) protein (726aa)
ATPase AAA n=1 Tax=Thermofilum sp. 1910b RepID=S5ZK36_9CREN rbh
ATPase AAA Tax=RBG_16_Archaea_50_20_curated
ATPase AAA
13_2_20cm_2_scaffold_255_15
unknown

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comp(15833..16270)
DNA (438bp) protein (146aa)

This feature has no annotations

13_2_20cm_2_scaffold_255_16
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(16338..16607)
DNA (270bp) protein (90aa)
Elongation factor 1-beta n=1 Tax=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) RepID=EF1B_METKA
translation elongation factor aEF-1 beta Tax=RBG_16_Archaea_50_20_curated
EFB1; translation elongation factor EF-1beta
13_2_20cm_2_scaffold_255_17
Archaeoglobus fulgidus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

Not on your lists

comp(16819..17814)
DNA (996bp) protein (332aa)
DNA ligase, putative n=1 Tax=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) RepID=O28549_ARCFU
DNA ligase
DNA ligase, putative {ECO:0000313|EMBL:AAB89526.1}; TaxID=224325 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Archaeoglobus.;" source="Archaeoglobus fulgidus (stra
13_2_20cm_2_scaffold_255_18
Archaeoglobus fulgidus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

Not on your lists

comp(17811..18593)
DNA (783bp) protein (261aa)
Probable DNA repair protein AF_1726 n=2 Tax=Archaeoglobus fulgidus RepID=Y1726_ARCFU
hypothetical protein
Non-homologous end joining protein Ku {ECO:0000255|HAMAP-Rule:MF_01875}; TaxID=224325 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Archaeoglobus.;" source="Archaeo
13_2_20cm_2_scaffold_255_19
BJP_IG2158_Thermincola_46_17, Thermincola, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18690..19604
DNA (915bp) protein (305aa)
DNA polymerase LigD, polymerase domain protein n=1 Tax=Thermincola potens (strain JR) RepID=D5XFI5_THEPJ
DNA polymerase LigD, polymerase domain-containing protein
Tax=BJP_IG2158_Thermincola_46_17
13_2_20cm_2_scaffold_255_20
unknown

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19616..19774
DNA (159bp) protein (53aa)

This feature has no annotations

13_2_20cm_2_scaffold_255_trna_1
unknown

Not on your lists

19847..19962
DNA (116bp)
transferRNA
13_2_20cm_2_scaffold_255_21

Not on your lists

comp(20186..20458)
DNA (273bp) protein (91aa)
Marine sediment metagenome DNA, contig: S03H2_C01900 {ECO:0000313|EMBL:GAH21951.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
13_2_20cm_2_scaffold_255_22
CG_Omnitr_03, Omnitrophica, Bacteria

Not on your lists

comp(20483..21028)
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Methanolinea tarda NOBI-1 RepID=G6FM11_9EURY
hypothetical protein Tax=CG_Omnitr_03
hypothetical protein
13_2_20cm_2_scaffold_255_23
unknown

Not on your lists

comp(21048..21341)
DNA (294bp) protein (98aa)

This feature has no annotations

13_2_20cm_2_scaffold_255_24
unknown

Not on your lists

comp(21531..21851)
DNA (321bp) protein (107aa)

This feature has no annotations

13_2_20cm_2_scaffold_255_25
unknown

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21993..22166
DNA (174bp) protein (58aa)

This feature has no annotations

13_2_20cm_2_scaffold_255_26
unknown

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22431..22685
DNA (255bp) protein (85aa)

This feature has no annotations

13_2_20cm_2_scaffold_255_27

Not on your lists

22625..23578
DNA (954bp) protein (318aa)
Prophage MuMc02, terminase, ATPase subunit n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N5U0_9ARCH
prophage MuMc02, terminase, ATPase subunit
Marine sediment metagenome DNA, contig: S12H4_S02642 {ECO:0000313|EMBL:GAI98038.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
Displaying 28 items

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