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13_2_20cm_2_scaffold_263

Search features with annotation key words

Displaying items 1-30 of 49 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_2_scaffold_263_1
Desulfococcus oleovorans, Desulfococcus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..656
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) RepID=A8ZTX1_DESOH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABW67904.1}; TaxID=96561 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfococcus.;" source="Desulfococcus
13_2_20cm_2_scaffold_263_2
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(653..1666)
DNA (1014bp) protein (338aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA63_GEMAT
Patatin
Patatin {ECO:0000313|EMBL:AHG91762.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_2_20cm_2_scaffold_263_3
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

1690..2505
DNA (816bp) protein (272aa)
Putative peptide ABC transporter permease protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A623_GEMAT rbh
putative peptide ABC transporter permease protein
Putative peptide ABC transporter permease protein {ECO:0000313|EMBL:BAH37683.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatim
13_2_20cm_2_scaffold_263_4
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

2502..3689
DNA (1188bp) protein (396aa)
Putative aminotransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A624_GEMAT
putative aminotransferase Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
putative aminotransferase
13_2_20cm_2_scaffold_263_5
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(3757..4410)
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SH80_RHOMR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN72308.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus mari
13_2_20cm_2_scaffold_263_6
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(4420..5673)
DNA (1254bp) protein (418aa)
Tyrosine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00105716}; EC=6.1.1.1 {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00105716};; Tyrosyl-tRNA synthetase {ECO:00002
Tyrosine--tRNA ligase n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=SYY_ROSS1
Tyrosyl-tRNA synthetase
13_2_20cm_2_scaffold_263_7
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

5742..6884
DNA (1143bp) protein (381aa)
penicillin-binding protein; K05366 penicillin-binding protein 1A [EC:2.4.1.- 3.4.-.-] Tax=GWC2_Gemmatimonadetes_71_10_curated
Penicillin-binding protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A626_GEMAT
penicillin-binding protein, 1A family
13_2_20cm_2_scaffold_263_8
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

6859..8979
DNA (2121bp) protein (707aa)
penicillin-binding protein; K05366 penicillin-binding protein 1A [EC:2.4.1.- 3.4.-.-] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Penicillin-binding protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A626_GEMAT
penicillin-binding protein, 1A family
13_2_20cm_2_scaffold_263_9
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

8991..9449
DNA (459bp) protein (153aa)
Arginine repressor n=2 Tax=Desulfotomaculum RepID=F6B9N7_DESCC
arginine repressor ArgR; K03402 transcriptional regulator of arginine metabolism Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
arginine repressor ArgR
13_2_20cm_2_scaffold_263_10
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

9534..10286
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7B7_GEMAT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_2_20cm_2_scaffold_263_11
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

10310..11518
DNA (1209bp) protein (403aa)
Nucleoside:H symporter n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MJH0_RHOM4
nucleoside:H symporter
Nucleoside:H symporter {ECO:0000313|EMBL:ACY48628.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus marin
13_2_20cm_2_scaffold_263_12
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

11532..12869
DNA (1338bp) protein (446aa)
Oxidoreductase domain protein n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SFA6_RHOMR
oxidoreductase domain-containing protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
oxidoreductase domain-containing protein
13_2_20cm_2_scaffold_263_13
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

12983..13684
DNA (702bp) protein (234aa)
thiol--disulfide interchange protein; K04084 thiol:disulfide interchange protein DsbD [EC:1.8.1.8] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Thiol--disulfide interchange protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ADP4_GEMAT
thiol--disulfide interchange protein
13_2_20cm_2_scaffold_263_14
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

13681..14058
DNA (378bp) protein (126aa)
Thioredoxin n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ADP5_GEMAT
thioredoxin Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Redoxin domain protein
13_2_20cm_2_scaffold_263_15
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(14193..14531)
DNA (339bp) protein (113aa)
putative peroxiredoxin (EC:1.11.1.15) Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
putative peroxiredoxin (EC:1.11.1.15)
Putative peroxiredoxin n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA68_GEMAT
13_2_20cm_2_scaffold_263_16
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(14541..14780)
DNA (240bp) protein (80aa)
putative peroxiredoxin (EC:1.11.1.15) Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_2_20cm_2_scaffold_263_17
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(14815..15060)
DNA (246bp) protein (82aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEF59306.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedo
13_2_20cm_2_scaffold_263_18
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

Not on your lists

comp(15083..16894)
DNA (1812bp) protein (604aa)
SSS sodium solute transporter superfamily n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LJU6_CHLTF rbh
SSS sodium solute transporter superfamily protein
SSS sodium solute transporter superfamily {ECO:0000313|EMBL:AEP13113.1}; TaxID=981222 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" source="Chloracidobacterium
13_2_20cm_2_scaffold_263_19
RBG_13_Aminicenantes_63_10_curated, Aminicenantes, Bacteria

Not on your lists

comp(16907..17971)
DNA (1065bp) protein (355aa)
Alpha-galactosidase; K07407 alpha-galactosidase [EC:3.2.1.22] Tax=RBG_13_Aminicenantes_63_10_curated
Alpha-galactosidase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IR22_KORVE
alpha-galactosidase
13_2_20cm_2_scaffold_263_20
bacterium UASB270, Bacteria

Not on your lists

comp(18084..19535)
DNA (1452bp) protein (484aa)
Beta-N-acetylhexosaminidase n=1 Tax=Rhodanobacter sp. 115 RepID=I4W0L2_9GAMM
Beta-hexosaminidase {ECO:0000313|EMBL:GAK60541.1}; TaxID=1499967 species="Bacteria.;" source="bacterium UASB270.;"
beta-N-acetylhexosaminidase
13_2_20cm_2_scaffold_263_21
RBG_13_Aminicenantes_62_12_curated, Aminicenantes, Bacteria

Not on your lists

comp(19540..20367)
DNA (828bp) protein (276aa)
hypothetical protein Tax=RBG_13_Aminicenantes_62_12_curated
cycloisomaltooligosaccharide glucanotransferase id=8266036 bin=CD_OP8_4m species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=CD_OP8_4m organism_group=OP8 (Aminicenantes)
hypothetical protein
13_2_20cm_2_scaffold_263_22
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(20367..21641)
DNA (1275bp) protein (425aa)
Putative oxidoreductase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7B3_GEMAT rbh
putative oxidoreductase Tax=RBG_16_Gemmatimonadetes_66_8_curated
putative oxidoreductase
13_2_20cm_2_scaffold_263_23
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(21641..22234)
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HCB2_SALRM
Tat pathway signal sequence domain-containing protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_2_20cm_2_scaffold_263_24
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(22490..23983)
DNA (1494bp) protein (498aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7A9_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
GMC oxidoreductase
13_2_20cm_2_scaffold_263_25
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(24858..25706)
DNA (849bp) protein (283aa)
xylose isomerase domain-containing protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
xylose isomerase domain-containing protein id=12554481 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
xylose isomerase domain-containing protein
13_2_20cm_2_scaffold_263_26
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

25891..27123
DNA (1233bp) protein (411aa)
argininosuccinate synthase family protein (EC:6.3.4.5); K01940 argininosuccinate synthase [EC:6.3.4.5] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Uncharacterized protein n=2 Tax=Populus RepID=B9HKP8_POPTR
Argininosuccinate synthase
13_2_20cm_2_scaffold_263_27
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

27123..28544
DNA (1422bp) protein (474aa)
argH; argininosuccinate lyase (EC:4.3.2.1)
Argininosuccinate lyase {ECO:0000256|HAMAP-Rule:MF_00006, ECO:0000256|SAAS:SAAS00211019}; Short=ASAL {ECO:0000256|HAMAP-Rule:MF_00006};; EC=4.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00006, ECO:0000256|SAAS:S
Argininosuccinate lyase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4N7_GEMAT
13_2_20cm_2_scaffold_263_28
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

28643..29191
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A628_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
HNH endonuclease
13_2_20cm_2_scaffold_263_29
GWA2_Deltaproteobacteria_55_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29217..29471
DNA (255bp) protein (85aa)
hypothetical protein Tax=GWA2_Deltaproteobacteria_55_10_curated
hypothetical protein id=15192333 bin=GWC2_NOV_55_46 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWC2_NOV_55_46 organism_group=Proteobacteria
hypothetical protein
13_2_20cm_2_scaffold_263_30
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(29468..30088)
DNA (621bp) protein (207aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A629_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Protein of unknown function DUF4390
Displaying items 1-30 of 49 in total

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