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13_2_20cm_2_scaffold_279

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_2_scaffold_279_1
unknown

Not on your lists

comp(3..743)
DNA (741bp) protein (247aa)

This feature has no annotations

13_2_20cm_2_scaffold_279_2
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(758..1600)
DNA (843bp) protein (281aa)
ABC transporter-like protein; K02006 cobalt/nickel transport system ATP-binding protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
ABC transporter; K02006 cobalt/nickel transport system ATP-binding protein id=14629641 bin=bin8_Chloro species=Clostridium saccharolyticum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin8_Chloro organism_group=Chloroflexi
ABC transporter-like protein
13_2_20cm_2_scaffold_279_3
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(1585..2385)
DNA (801bp) protein (267aa)
hypothetical protein n=1 Tax=Actinopolymorpha alba RepID=UPI0003604119
ABC transporter; K02006 cobalt/nickel transport system ATP-binding protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
cobalt ABC transporter ATP-binding protein
13_2_20cm_2_scaffold_279_4
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(2373..3050)
DNA (678bp) protein (226aa)
Cobalt transport protein n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AUT4_RUBXD
cobalt transport protein; K02008 cobalt/nickel transport system permease protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
cobalt transport protein
13_2_20cm_2_scaffold_279_5
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(3047..3616)
DNA (570bp) protein (190aa)
Signal transduction histidine kinase, LytS n=1 Tax=Arthrobacter sp. (strain FB24) RepID=A0JVH5_ARTS2
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
signal transduction histidine kinase LytS
13_2_20cm_2_scaffold_279_6
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

3661..4923
DNA (1263bp) protein (421aa)
peptidase M28
Peptidase M28 {ECO:0000313|EMBL:AHG89985.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
peptidase M28 id=12555661 bin=CNBR_ACIDO species=Pirellula staleyi genus=Pirellula taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? rbh
13_2_20cm_2_scaffold_279_7
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

4920..5402
DNA (483bp) protein (161aa)
Putative GAF sensor protein n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HH02_ANADF
putative GAF sensor protein; K07170 GAF domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
putative GAF sensor protein
13_2_20cm_2_scaffold_279_8
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(5478..6302)
DNA (825bp) protein (275aa)
ABC transporter related-protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XIU4_9BACT
ABC transporter related-protein {ECO:0000313|EMBL:EEF60171.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" sour
hypothetical protein
13_2_20cm_2_scaffold_279_9
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6499..8532)
DNA (2034bp) protein (678aa)
ABC transporter, inner membrane subunit n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IG76_ANADE
ABC transporter inner membrane subunit
ABC transporter, inner membrane subunit {ECO:0000313|EMBL:ABC83585.1}; TaxID=290397 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaer
13_2_20cm_2_scaffold_279_10
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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8562..9452
DNA (891bp) protein (297aa)
Putative hydrolase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5S0_GEMAT
putative hydrolase
Putative hydrolase {ECO:0000313|EMBL:BAH37580.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 /
13_2_20cm_2_scaffold_279_11
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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9493..11091
DNA (1599bp) protein (533aa)
DNA polymerase X family protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5R8_GEMAT rbh
DNA polymerase X family protein; K02347 DNA polymerase (family X) Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PHP domain protein
13_2_20cm_2_scaffold_279_12
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

11234..11932
DNA (699bp) protein (233aa)
DNA-(apurinic or apyrimidinic site) lyase/endonuclease III; K10773 endonuclease III [EC:4.2.99.18] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
endonuclease III/DNA-(apurinic or apyrimidinic site) lyase (EC:4.2.99.18)
Endonuclease III n=1 Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LWF5_ACIC1
13_2_20cm_2_scaffold_279_13
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

11932..13101
DNA (1170bp) protein (390aa)
amidohydrolase (EC:3.5.1.14); K01436 amidohydrolase [EC:3.5.1.-] Tax=RBG_16_RIF_WS3X_71_46_curated
amidohydrolase (EC:3.5.1.14)
Amidohydrolase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1CB03_SPHTD id=5225688 bin=16ft_combo_ws3_JS1 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
13_2_20cm_2_scaffold_279_14
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

13707..15131
DNA (1425bp) protein (475aa)
hypothetical protein; K06888 Tax=GWC2_Gemmatimonadetes_71_10_curated
hypothetical protein; K06888 id=14630958 bin=bin9_gal15 tax=bin9_gal15 organism_group=GAL15
hypothetical protein
13_2_20cm_2_scaffold_279_15
RBG_16_Planctomycetes_43_13_curated, Planctomycetes, Bacteria

Not on your lists

15128..16096
DNA (969bp) protein (323aa)
Predicted oxidoreductases (Related to aryl-alcohol dehydrogenases) n=1 Tax=Chthonomonas calidirosea T49 RepID=S0ETX6_9BACT
aldo/keto reductase Tax=RBG_16_Planctomycetes_43_13_curated
Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)
13_2_20cm_2_scaffold_279_16
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

16099..16548
DNA (450bp) protein (150aa)
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Methanobrevibacter sp. AbM4 RepID=R9SMZ4_9EURY
peptidyl-prolyl cis-trans isomerase
peptidyl-prolyl cis-trans isomerase Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
13_2_20cm_2_scaffold_279_17
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

16599..17747
DNA (1149bp) protein (383aa)
Putative uncharacterized protein n=1 Tax=Robiginitalea biformata (strain ATCC BAA-864 / HTCC2501 / KCTC 12146) RepID=A4CMZ2_ROBBH
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Protein of unknown function DUF2911
13_2_20cm_2_scaffold_279_18
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

17765..18190
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5Z4_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_2_20cm_2_scaffold_279_19
Rheinheimera sp. A13L, Rheinheimera, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18192..19283
DNA (1092bp) protein (364aa)
Penicillin-binding protein, beta-lactamase class C n=1 Tax=Rheinheimera sp. A13L RepID=F7NSW8_9GAMM
Penicillin-binding protein, beta-lactamase class C {ECO:0000313|EMBL:EGM78997.1}; TaxID=506534 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Rheinheimera.;" sour
beta-lactamase
13_2_20cm_2_scaffold_279_20
unknown

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19498..19626
DNA (129bp) protein (43aa)

This feature has no annotations

13_2_20cm_2_scaffold_279_21
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

20061..21398
DNA (1338bp) protein (446aa)
Oxidoreductase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IP74_KORVE
oxidoreductase domain protein
Oxidoreductase domain protein {ECO:0000313|EMBL:AHG92323.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_2_20cm_2_scaffold_279_22
Burkholderia glathei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21382..22113)
DNA (732bp) protein (244aa)
Uncharacterized protein n=1 Tax=Cupriavidus basilensis OR16 RepID=H1S465_9BURK
Probable transmembrane protein {ECO:0000313|EMBL:CDY75152.1}; TaxID=60547 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia
hypothetical protein
13_2_20cm_2_scaffold_279_23
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(22119..22898)
DNA (780bp) protein (260aa)
hypothetical protein n=1 Tax=Rhizobium giardinii RepID=UPI00036A630F rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIC16808.1}; TaxID=926571 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera v
13_2_20cm_2_scaffold_279_24
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(22918..23631)
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A6U5_STAND
Uncharacterized protein {ECO:0000313|EMBL:ETW98875.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
hypothetical protein
13_2_20cm_2_scaffold_279_25
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23794..24042
DNA (249bp) protein (83aa)
Transcriptional regulator, ArsR family n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4R844_PHEZH
ArsR family transcriptional regulator {ECO:0000313|EMBL:ETW98873.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella
ArsR family transcriptional regulator
13_2_20cm_2_scaffold_279_26
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24039..24437
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VVY8_9GAMM
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
hypothetical protein
Displaying 26 items

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