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13_2_20cm_2_scaffold_3380

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_2_scaffold_3380_1
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(1..543)
DNA (543bp) protein (181aa)
ligand-gated channel n=1 Tax=Salisaeta longa RepID=UPI0003B4BA4A
bfeA; ferric enterobactin receptor; K02014 iron complex outermembrane recepter protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
bfeA; ferric enterobactin receptor
13_2_20cm_2_scaffold_3380_2
Myxococcus xanthus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(720..2153)
DNA (1434bp) protein (478aa)
Putative lipoprotein n=1 Tax=Myxococcus xanthus (strain DK 1622) RepID=Q1D364_MYXXD
lipoprotein
Putative lipoprotein {ECO:0000313|EMBL:ABF92711.1}; TaxID=246197 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus
13_2_20cm_2_scaffold_3380_3
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2156..5071)
DNA (2916bp) protein (972aa)
Putative outer membrane protein n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q08TB0_STIAD
TonB-dependent receptor
Putative outer membrane protein {ECO:0000313|EMBL:EAU63723.1}; TonB-dependent receptor {ECO:0000313|EMBL:ADO75923.1}; TaxID=378806 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales;
13_2_20cm_2_scaffold_3380_4
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

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comp(5181..6296)
DNA (1116bp) protein (372aa)
amino acid transporter
Amino acid transporter {ECO:0000313|EMBL:AIE85050.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginseng
amino acid transporter id=14627644 bin=bin7_NC10_sister species=Streptomyces cattleya genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin7_NC10_sister organism_group=NC10
13_2_20cm_2_scaffold_3380_5
Flavobacterium beibuense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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6463..7614
DNA (1152bp) protein (384aa)
Geranylgeranyl reductase family protein n=1 Tax=Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221) RepID=L0G1H9_ECHVK
Geranylgeranyl reductase {ECO:0000313|EMBL:KGO81889.1}; TaxID=1406840 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium be
geranylgeranyl reductase
13_2_20cm_2_scaffold_3380_6
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7503..8702)
DNA (1200bp) protein (400aa)
Glycosyl transferase group 1 n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) RepID=B8J529_ANAD2
group 1 glycosyl transferase
Glycosyl transferase group 1 {ECO:0000313|EMBL:ACL64884.1}; TaxID=455488 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter
13_2_20cm_2_scaffold_3380_7
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(8717..9688)
DNA (972bp) protein (324aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A779_GEMAT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_2_20cm_2_scaffold_3380_8
Nostoc punctiforme, Nostoc, Nostocales, Cyanobacteria, Bacteria

Not on your lists

9767..10690
DNA (924bp) protein (308aa)
alcohol dehydrogenase (EC:1.1.1.103)
Alcohol dehydrogenase GroES domain protein {ECO:0000313|EMBL:ACC82889.1}; EC=1.1.1.103 {ECO:0000313|EMBL:ACC82889.1};; TaxID=63737 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Nostoc.;"
Alcohol dehydrogenase GroES domain protein n=1 Tax=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) RepID=B2IVS6_NOSP7
13_2_20cm_2_scaffold_3380_9
RLO_PLX_64_10, Bacteria

Not on your lists

comp(10700..10960)
DNA (261bp) protein (87aa)
hypothetical protein n=1 Tax=Nocardiopsis gilva RepID=UPI00034C6145
putative redox protein, regulator of disulfide bond formation; K06889; K07397 putative redox protein Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
OsmC-like protein/redox protein
13_2_20cm_2_scaffold_3380_10
Rhodospirillaceae bacterium BRH_c57, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10967..11140)
DNA (174bp) protein (58aa)
OsmC family protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V196_9BRAD
Osmotically inducible protein C {ECO:0000313|EMBL:KJS35771.1}; TaxID=1629718 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae.;" source="Rhodospirillaceae ba
OsmC family protein
13_2_20cm_2_scaffold_3380_11
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

11172..12002
DNA (831bp) protein (277aa)
upp; uracil phosphoribosyltransferase (EC:2.4.2.9); K00761 uracil phosphoribosyltransferase [EC:2.4.2.9] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Uracil phosphoribosyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AEP3_GEMAT
Uracil phosphoribosyl transferase
13_2_20cm_2_scaffold_3380_trna_1
unknown

Not on your lists

comp(11189..11261)
DNA (73bp)
transferRNA
13_2_20cm_2_scaffold_3380_12
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

12085..12705
DNA (621bp) protein (207aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q021K4_SOLUE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ84385.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatu
13_2_20cm_2_scaffold_3380_13
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

12702..13253
DNA (552bp) protein (184aa)
Putative uncharacterized protein n=1 Tax=Carboxydibrachium pacificum DSM 12653 RepID=B7RAE3_9THEO
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EEB75114.1}; TaxID=391606 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Cal
13_2_20cm_2_scaffold_3380_14
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

13345..13893
DNA (549bp) protein (183aa)
RNA polymerase ECF-type sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABI4_GEMAT
RNA polymerase sigma factor, sigma-70 family
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AHG87845.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_2_20cm_2_scaffold_3380_15
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

13938..14402
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABI3_GEMAT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_2_20cm_2_scaffold_3380_16
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

14402..15979
DNA (1578bp) protein (526aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABI2_GEMAT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_2_20cm_2_scaffold_3380_17
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

16100..16660
DNA (561bp) protein (187aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B5E3FD
PBS lyase HEAT domain protein repeat-containing protein
PBS lyase HEAT domain protein repeat-containing protein {ECO:0000313|EMBL:AHG87842.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_2_20cm_2_scaffold_3380_18
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

16742..19405
DNA (2664bp) protein (888aa)
hypothetical protein n=1 Tax=Aminicenantes bacterium SCGC AAA252-A02 RepID=UPI0003B73283
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
hypothetical protein
13_2_20cm_2_scaffold_3380_19
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

19446..20048
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CEE2_THET1
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
hypothetical protein
13_2_20cm_2_scaffold_3380_20
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

20057..20599
DNA (543bp) protein (181aa)
putative ADP-ribose pyrophosphatase (EC:3.6.1.13); K01515 ADP-ribose pyrophosphatase [EC:3.6.1.13] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Putative ADP-ribose pyrophosphatase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AEN1_GEMAT
NUDIX hydrolase
13_2_20cm_2_scaffold_3380_21
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

20762..21406
DNA (645bp) protein (215aa)
RNA polymerase sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AEN0_GEMAT
RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RBG_16_Gemmatimonadetes_66_8_curated
RNA polymerase sigma factor, sigma-70 family
Displaying 22 items

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