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13_2_20cm_2_scaffold_3410

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_2_scaffold_3410_1
unknown

Not on your lists

comp(1..210)
DNA (210bp) protein (70aa)

This feature has no annotations

13_2_20cm_2_scaffold_3410_2
RLO_Elusimicrobia_59_9, Elusimicrobia, Bacteria

Not on your lists

373..1845
DNA (1473bp) protein (491aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_curated
hypothetical protein id=14425464 bin=bin1_lowGC species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=bin1_lowGC organism_group=Unknown_CP
hypothetical protein
13_2_20cm_2_scaffold_3410_3
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

1896..2453
DNA (558bp) protein (186aa)
Elongation factor P n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=EFP_GEMAT
efp; elongation factor P; K02356 elongation factor P Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Elongation factor P
13_2_20cm_2_scaffold_3410_4
unknown

Not on your lists

comp(3296..3391)
DNA (96bp) protein (32aa)

This feature has no annotations

13_2_20cm_2_scaffold_3410_5
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3839..5104
DNA (1266bp) protein (422aa)
Threonine synthase n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HGE0_ANADF
threonine synthase
Threonine synthase {ECO:0000313|EMBL:ABS27786.1}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source
13_2_20cm_2_scaffold_3410_6
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5089..5364
DNA (276bp) protein (92aa)
ThiamineS protein n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) RepID=B8J682_ANAD2
sulfur carrier protein ThiS
ThiamineS protein {ECO:0000313|EMBL:ACL66977.1}; Flags: Precursor;; TaxID=455488 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromy
13_2_20cm_2_scaffold_3410_7
Crinalium epipsammum, Crinalium, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(5339..6208)
DNA (870bp) protein (290aa)
2-hydroxy-3-oxopropionate reductase (EC:1.1.1.60)
2-hydroxy-3-oxopropionate reductase {ECO:0000313|EMBL:AFZ12491.1}; EC=1.1.1.60 {ECO:0000313|EMBL:AFZ12491.1};; TaxID=1173022 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; C
2-hydroxy-3-oxopropionate reductase n=1 Tax=Crinalium epipsammum PCC 9333 RepID=K9VWX4_9CYAN
13_2_20cm_2_scaffold_3410_8
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

6314..7288
DNA (975bp) protein (325aa)
qor2; NADPH:quinone reductase (EC:1.6.5.5); K00344 NADPH2:quinone reductase [EC:1.6.5.5] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Quinone oxidoreductase (NADPH:quinone reductase) id=4380010 bin=GWA2_Methylomirabilis_73_35 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Alcohol dehydrogenase zinc-binding domain protein
13_2_20cm_2_scaffold_3410_9
CSP1_5_NC10, NC10, Bacteria

Not on your lists

7308..8363
DNA (1056bp) protein (352aa)
aldo/keto reductase (EC:1.7.1.-)
aldo/keto reductase id=14431432 bin=bin3_NC10 species=Azorhizobium caulinodans genus=Azorhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10 rbh
aldo/keto reductase Tax=CSP1_5_NC10
13_2_20cm_2_scaffold_3410_10
RBG_13_Deltaproteobacteria_52_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8236..9510)
DNA (1275bp) protein (425aa)
hypothetical protein n=1 Tax=Desulfovibrio longus RepID=UPI0003B7B3E2
hypothetical protein Tax=RBG_13_Deltaproteobacteria_52_11_curated
hypothetical protein
13_2_20cm_2_scaffold_3410_11
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(9507..10967)
DNA (1461bp) protein (487aa)
Aromatic-L-amino-acid decarboxylase {ECO:0000313|EMBL:EFH85901.1}; EC=4.1.1.28 {ECO:0000313|EMBL:EFH85901.1};; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonob
Aromatic-L-amino-acid decarboxylase (EC:4.1.1.28)
Aromatic-L-amino-acid decarboxylase n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TR30_9CHLR
13_2_20cm_2_scaffold_3410_12

Not on your lists

comp(10964..11527)
DNA (564bp) protein (188aa)
beta-lactamase n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0002DC5B6F
Beta-lactamase {ECO:0000313|EMBL:ADC36031.1}; TaxID=698387 species="Bacteria; environmental samples.;" source="uncultured bacterium 270.;"
beta-lactamase
13_2_20cm_2_scaffold_3410_13
unknown

Not on your lists

11708..12433
DNA (726bp) protein (242aa)

This feature has no annotations

13_2_20cm_2_scaffold_3410_14
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(12411..14639)
DNA (2229bp) protein (743aa)
TonB-dependent receptor n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MGY8_RHOM4
TonB-dependent receptor
TonB-dependent receptor {ECO:0000313|EMBL:ACY47773.1}; Flags: Precursor;; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source
13_2_20cm_2_scaffold_3410_15
unknown

Not on your lists

comp(14782..14973)
DNA (192bp) protein (64aa)

This feature has no annotations

13_2_20cm_2_scaffold_3410_16
Nitrococcus mobilis, Nitrococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15146..16249
DNA (1104bp) protein (368aa)
ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (EC:4.1.1.39)
Ribulose-bisphosphate carboxylase-like protein rubisco-like protein n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BMZ4_9GAMM
Ribulose-bisphosphate carboxylase-like protein rubisco-like protein {ECO:0000313|EMBL:EAR22593.1}; TaxID=314278 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospira
13_2_20cm_2_scaffold_3410_17
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

16242..16643
DNA (402bp) protein (134aa)
hypothetical protein n=1 Tax=Arhodomonas aquaeolei RepID=UPI0003623C69
cupin Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
cupin
13_2_20cm_2_scaffold_3410_18
Geoalkalibacter subterraneus, Geoalkalibacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16640..18004
DNA (1365bp) protein (455aa)
Succinate-semialdehyde dehydrogenase (NAD(P)(+)) n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SK33_RHOMR
succinate-semialdehyde dehydrogenase
Succinate-semialdehyde dehydrogenase {ECO:0000313|EMBL:AJF06179.1}; TaxID=483547 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geoalkalibacter.;" source="
13_2_20cm_2_scaffold_3410_19
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

18001..18705
DNA (705bp) protein (235aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Putative uncharacterized protein id=4930082 bin=GWA2_Methylomirabilis_73_35 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_2_20cm_2_scaffold_3410_20
RBG_13_Planctomycetes_60_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(18711..19103)
DNA (393bp) protein (131aa)
Tax=RBG_13_Planctomycetes_60_9_curated
13_2_20cm_2_scaffold_3410_21

Not on your lists

comp(19111..19407)
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Candidatus Desulfamplus magnetomortis RepID=L0R6M7_9DELT
Marine sediment metagenome DNA, contig: S01H4_S18999 {ECO:0000313|EMBL:GAH14822.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
hypothetical protein
13_2_20cm_2_scaffold_3410_22
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(19577..20212)
DNA (636bp) protein (212aa)
O-methyltransferase family 3 id=5009188 bin=GWA2_Ignavibacteria_55_11 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
O-methyltransferase family protein Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
O-methyltransferase family protein
13_2_20cm_2_scaffold_3410_23
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(20226..21053)
DNA (828bp) protein (276aa)
Tetratricopeptide TPR_2 repeat protein n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7H8V0_ANADF
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_2_20cm_2_scaffold_3410_24
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(21057..21422)
DNA (366bp) protein (122aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003619ACB
Ku family containing protein; K10979 DNA end-binding protein Ku Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Ku family containing protein
Displaying 24 items

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