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13_2_20cm_2_scaffold_3556

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Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_2_scaffold_3556_1
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

2..229
DNA (228bp) protein (76aa)
siroheme synthase; K02304 precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:1.3.1.76 4.99.1.4] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
siroheme synthase; K02304 precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:1.3.1.76 4.99.1.4] id=14627064 bin=bin7_NC10_sister species=Acetonema longum genus=Acetonema taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
13_2_20cm_2_scaffold_3556_2
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

220..1107
DNA (888bp) protein (296aa)
uroporphyrinogen-III synthase/uroporphyrinogen-III C-methyltransferase (EC:2.1.1.107 4.2.1.75) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
uroporphyrinogen-III synthase/uroporphyrinogen-III C-methyltransferase (EC:2.1.1.107 4.2.1.75)
Uroporphyrinogen-III methylase and Uroporphyrinogen-III synthase id=4306753 bin=GWF2_Methylomirabilis_70_14 species=Pelotomaculum thermopropionicum genus=Pelotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_2_20cm_2_scaffold_3556_3
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

1104..2072
DNA (969bp) protein (323aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0002E5A747
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH39598.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-
13_2_20cm_2_scaffold_3556_4
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

2095..2727
DNA (633bp) protein (211aa)
peroxidase (EC:1.11.1.7) Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
peroxidase (EC:1.11.1.7)
Peroxidase id=2312817 bin=GWA2_Methylomirabilis_73_35 species=Starkeya novella genus=Starkeya taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_2_20cm_2_scaffold_3556_5
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

2873..4459
DNA (1587bp) protein (529aa)
AMP-dependent synthetase and ligase id=2213452 bin=GWA2_Methylomirabilis_73_35 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
AMP-dependent synthetase and ligase Tax=GWA2_Rokubacteria_73_35_curated
AMP-dependent synthetase and ligase
13_2_20cm_2_scaffold_3556_6
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

4856..5347
DNA (492bp) protein (164aa)
Luciferase-like monooxygenase family protein n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CAT0_MYXFH
luciferase family protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
luciferase-like monooxygenase family protein
13_2_20cm_2_scaffold_3556_7
Methylobacterium aquaticum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5344..6423
DNA (1080bp) protein (360aa)
hypothetical protein n=1 Tax=Methylobacterium sp. 77 RepID=UPI00036DE1C1
Methylobacterium aquaticum DNA, complete genome, strain: MA-22A {ECO:0000313|EMBL:BAQ46459.1}; TaxID=270351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Me
NHL repeat containing protein
13_2_20cm_2_scaffold_3556_8
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

6510..7850
DNA (1341bp) protein (447aa)
Sugar ABC superfamily ATP binding cassette transporter, substrate-binding id=1703830 bin=GWA2_Methylomirabilis_73_35 species=Mobiluncus mulieris genus=Mobiluncus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
family 1 extracellular solute-binding protein; K02027 multiple sugar transport system substrate-binding protein Tax=GWA2_Rokubacteria_73_35_curated
family 1 extracellular solute-binding protein
13_2_20cm_2_scaffold_3556_9
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

7886..8737
DNA (852bp) protein (284aa)
binding-protein-dependent transport systems inner membrane component; K02025 multiple sugar transport system permease protein Tax=GWA2_Rokubacteria_73_35_curated
Binding-protein-dependent transport systems inner membrane component id=1703832 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Natrialba taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
binding-protein-dependent transport systems inner membrane component
13_2_20cm_2_scaffold_3556_10
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

8734..9561
DNA (828bp) protein (276aa)
ABC-type sugar transport system, permease component id=1703834 bin=GWA2_Methylomirabilis_73_35 species=Burkholderia sp. Ch1-1 genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
ABC-type sugar transport systems, permease component Tax=GWA2_Rokubacteria_73_35_curated
ABC-type sugar transport systems, permease component
13_2_20cm_2_scaffold_3556_11
SAR202 cluster bacterium SCGC AAA240-N13, Chloroflexi, Bacteria

Not on your lists

9558..9908
DNA (351bp) protein (117aa)
hypothetical protein n=1 Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI00037B5B29
13_2_20cm_2_scaffold_3556_12
Bacillus cytotoxicus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(9951..11111)
DNA (1161bp) protein (387aa)
Uncharacterized protein n=1 Tax=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) RepID=A7GTG2_BACCN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS23420.1}; TaxID=315749 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source="Bacillus cereus subsp. c
13_2_20cm_2_scaffold_3556_13
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(11120..12442)
DNA (1323bp) protein (441aa)
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C4T0_SPHTD
alkyl hydroperoxide reductase
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen {ECO:0000313|EMBL:ACZ39247.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacteri
13_2_20cm_2_scaffold_3556_14
RBG_16_Gammaproteobacteria_66_13_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12478..12897)
DNA (420bp) protein (140aa)
hypothetical protein n=1 Tax=Rhodococcus ruber RepID=UPI0003449F8E
PPOX class F420-dependent enzyme Tax=RBG_16_Gammaproteobacteria_66_13_curated
pyridoxamine 5'-phosphate oxidase
13_2_20cm_2_scaffold_3556_15
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(12914..14116)
DNA (1203bp) protein (401aa)
cytochrome P450; K00517 [EC:1.14.-.-] Tax=RBG_16_Chloroflexi_68_14_curated
hypothetical protein n=1 Tax=Scytonema hofmanni RepID=UPI00034D573C
eryF; cytochrome P450 107B1
13_2_20cm_2_scaffold_3556_16
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(14120..14683)
DNA (564bp) protein (188aa)
Cysteine dioxygenase (EC:1.13.11.20)
Cysteine dioxygenase type I id=2213479 bin=GWA2_Methylomirabilis_73_35 species=Bacillus megaterium genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Cysteine dioxygenase type I Tax=GWA2_Rokubacteria_73_35_curated
13_2_20cm_2_scaffold_3556_17
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(15528..16184)
DNA (657bp) protein (219aa)
sulfurtransferase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Sulfurtransferase id=2213482 bin=GWA2_Methylomirabilis_73_35 species=Ralstonia sp. PBA genus=Ralstonia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Rhodanese-like protein
13_2_20cm_2_scaffold_3556_18
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

17018..18238
DNA (1221bp) protein (407aa)
Multidrug-efflux transporter id=4930049 bin=GWA2_Methylomirabilis_73_35 species=Thermacetogenium phaeum genus=Thermacetogenium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
multidrug-efflux transporter Tax=GWA2_Rokubacteria_73_35_curated
multidrug-efflux transporter
13_2_20cm_2_scaffold_3556_19
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(18213..18560)
DNA (348bp) protein (116aa)
mandelate racemase/muconate lactonizing protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Mandelate racemase/muconate lactonizing protein id=4930050 bin=GWA2_Methylomirabilis_73_35 species=Oceanibaculum indicum genus=Oceanibaculum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_2_20cm_2_scaffold_3556_20
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(18557..19213)
DNA (657bp) protein (219aa)
Mandelate racemase/muconate lactonizing protein id=4930050 bin=GWA2_Methylomirabilis_73_35 species=Oceanibaculum indicum genus=Oceanibaculum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
mandelate racemase/muconate lactonizing protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
mandelate racemase/muconate lactonizing protein
13_2_20cm_2_scaffold_3556_21
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(19222..20250)
DNA (1029bp) protein (343aa)
2-alkenal reductase (EC:1.3.1.74) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
2-alkenal reductase (EC:1.3.1.74) id=14627401 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=bin7_NC10_sister organism_group=NC10 rbh
alcohol dehydrogenase (EC:1.3.1.74)
13_2_20cm_2_scaffold_3556_22
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(20568..21272)
DNA (705bp) protein (235aa)
putative phosphoglycolate phosphatase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative Phosphoglycolate phosphatase id=4930053 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_2_20cm_2_scaffold_3556_23
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(21363..21548)
DNA (186bp) protein (62aa)
pcp; pyrrolidone-carboxylate peptidase; K01304 pyroglutamyl-peptidase [EC:3.4.19.3] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Pyrrolidone-carboxylate peptidase id=4930056 bin=GWA2_Methylomirabilis_73_35 species=Pyrococcus furiosus genus=Pyrococcus taxon_order=Thermococcales taxon_class=Thermococci phylum=Euryarchaeota tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_2_20cm_2_scaffold_3556_24
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(21956..22228)
DNA (273bp) protein (91aa)
dihydrolipoamide dehydrogenase; K00382 dihydrolipoamide dehydrogenase [EC:1.8.1.4] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
dihydrolipoamide dehydrogenase; K00382 dihydrolipoamide dehydrogenase [EC:1.8.1.4] id=14625975 bin=bin7_NC10_sister species=Desulfococcus multivorans genus=Desulfococcus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
dihydrolipoamide dehydrogenase
13_2_20cm_2_scaffold_3556_25
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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comp(22167..23219)
DNA (1053bp) protein (351aa)
dihydrolipoamide dehydrogenase; K00382 dihydrolipoamide dehydrogenase [EC:1.8.1.4] id=14625975 bin=bin7_NC10_sister species=Desulfococcus multivorans genus=Desulfococcus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
dihydrolipoamide dehydrogenase; K00382 dihydrolipoamide dehydrogenase [EC:1.8.1.4] Tax=CSP1_6_Rokubacteria
pyruvate dehydrogenase E3 component
Displaying 25 items

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