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13_2_20cm_2_scaffold_372

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_2_scaffold_372_1
Thermobaculum terrenum, Thermobaculum, Bacteria

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comp(2..862)
DNA (861bp) protein (287aa)
formate dehydrogenase subunit alpha (EC:1.2.1.2)
Formate dehydrogenase, alpha subunit {ECO:0000313|EMBL:ACZ41530.1}; EC=1.2.1.2 {ECO:0000313|EMBL:ACZ41530.1};; Flags: Precursor;; TaxID=525904 species="Bacteria; Thermobaculum.;" source="Thermobaculum
Formate dehydrogenase, alpha subunit n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CF24_THET1
13_2_20cm_2_scaffold_372_2
unknown

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1171..1455
DNA (285bp) protein (95aa)

This feature has no annotations

13_2_20cm_2_scaffold_372_3
unknown

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1581..2147
DNA (567bp) protein (189aa)

This feature has no annotations

13_2_20cm_2_scaffold_372_4
unknown

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2179..2475
DNA (297bp) protein (99aa)

This feature has no annotations

13_2_20cm_2_scaffold_372_5
Geobacter daltonii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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2504..3355
DNA (852bp) protein (284aa)
Extracellular repeat protein, HAF family n=1 Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M897_GEODF
extracellular repeat-containing protein, HAF family
HAF repeat protein {ECO:0000313|EMBL:ACM20363.1}; TaxID=316067 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter daltonii (stra
13_2_20cm_2_scaffold_372_6
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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3431..3853
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. CF161 RepID=S6JJI3_9PSED
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_2_20cm_2_scaffold_372_7
Rhizobium gallicum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3947..5290)
DNA (1344bp) protein (448aa)
major facilitator transporter n=1 Tax=Rhizobium mongolense RepID=UPI0003B5B0B8
major facilitator superfamily protein
Major facilitator superfamily protein {ECO:0000313|EMBL:AJD44964.1}; TaxID=1418105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhi
13_2_20cm_2_scaffold_372_8
BJP_S1_SUB10_Methylophilales_55_32, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5405..5869)
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Clostridium sporogenes ATCC 15579 RepID=J7SFH1_CLOSG
ycdZ; inner membrane protein ycdZ
Tax=BJP_S1_SUB10_Methylophilales_55_32
13_2_20cm_2_scaffold_372_9
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

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comp(6142..6756)
DNA (615bp) protein (205aa)
Putative two-component response regulator n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I1B7_CALAS
two component LuxR family transcriptional regulator Tax=RBG_16_Chloroflexi_63_12_curated
putative two-component response regulator
13_2_20cm_2_scaffold_372_10
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

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comp(6767..7363)
DNA (597bp) protein (199aa)
Putative two-component histidine kinase n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I1B6_CALAS
histidine kinase Tax=RBG_16_Chloroflexi_63_12_curated
putative two-component histidine kinase
13_2_20cm_2_scaffold_372_11
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(7431..9353)
DNA (1923bp) protein (641aa)
glucosamine-6-phosphate deaminase-like protein; K02564 glucosamine-6-phosphate deaminase [EC:3.5.99.6] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Putative glucosamine-6-phosphate isomerase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A967_GEMAT
glucosamine-6-phosphate isomerase
13_2_20cm_2_scaffold_372_12
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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9594..10739
DNA (1146bp) protein (382aa)
hypothetical protein n=1 Tax=Wenxinia marina RepID=UPI00037930C8
PAS/PAC sensor signal transduction histidine kinase Tax=RBG_16_Gemmatimonadetes_66_8_curated
histidine kinase
13_2_20cm_2_scaffold_372_13
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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10799..12337
DNA (1539bp) protein (513aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI00031DFAC0
peptidase M28 Tax=RBG_16_Gemmatimonadetes_66_8_curated
peptidase M28
13_2_20cm_2_scaffold_372_14
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(12320..12796)
DNA (477bp) protein (159aa)
Glyoxalase n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SBI4_9RHIZ
glyoxalase/bleomycin resistance protein/dioxygenase; K07104 Tax=RBG_16_Gemmatimonadetes_66_8_curated
glyoxalase
13_2_20cm_2_scaffold_372_15
R_Acidobacteria_67_21, Acidobacteria, Bacteria

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12865..14493
DNA (1629bp) protein (543aa)
delta-1-pyrroline-5-carboxylate dehydrogenase (EC:1.5.1.12); K00294 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.1.12] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
delta-1-pyrroline-5-carboxylate dehydrogenase (EC:1.5.1.12); K00294 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.1.12] id=16783954 bin=RBG_16_Aminicenantes_63_16_plus species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Marinimicrobia tax=RBG_16_Aminicenantes_63_16_plus organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate Resolve three similar GC_Cov Aminicentantes bins with ESOM
delta-1-pyrroline-5-carboxylate dehydrogenase (EC:1.5.1.12)
13_2_20cm_2_scaffold_372_16
RLO_Nitrospinae_39_16, Nitrospinae, Bacteria

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14490..15083
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Nitrospina gracilis 3/211 RepID=M1YKB3_9BACT
hypothetical protein Tax=RifCSPlowO2_12_Nitrospinae_39_16_curated
13_2_20cm_2_scaffold_372_17
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(15143..15319)
DNA (177bp) protein (59aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2B6K0_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
hypothetical protein
13_2_20cm_2_scaffold_372_18
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

Not on your lists

15904..17430
DNA (1527bp) protein (509aa)
hypothetical protein; K06888 id=24560588 bin=RBG_19FT_COMBO_GAL15_69_19 tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
hypothetical protein; K06888 Tax=CSP1_3_Armatimonadetes
hypothetical protein
13_2_20cm_2_scaffold_372_19
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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17518..18066
DNA (549bp) protein (183aa)
RNA polymerase ECF-type sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5K6_GEMAT
RNA polymerase sigma factor, sigma-70 family
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AHG92078.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_2_20cm_2_scaffold_372_20
RLO_PLX_64_10, Bacteria

Not on your lists

18063..18677
DNA (615bp) protein (205aa)
Glycoside hydrolase family 13 domain protein n=1 Tax=Desulfomicrobium baculatum (strain DSM 4028 / VKM B-1378) RepID=C7LU03_DESBD
glycoside hydrolase family 13 Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
glycoside hydrolase family 13
13_2_20cm_2_scaffold_372_21
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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18674..19339
DNA (666bp) protein (222aa)
hypothetical protein
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
13_2_20cm_2_scaffold_372_22
unknown

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19485..19697
DNA (213bp) protein (71aa)

This feature has no annotations

13_2_20cm_2_scaffold_372_23
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(19698..20951)
DNA (1254bp) protein (418aa)
arginine biosynthesis bifunctional protein ArgJ (EC:2.3.1.1); K00620 glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_
rca:Rcas_3355 arginine biosynthesis bifunctional protein ArgJ (EC:2.3.1.1); K00620 glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1] id=1246557 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi rbh
arginine biosynthesis bifunctional protein ArgJ (EC:2.3.1.1)
13_2_20cm_2_scaffold_372_24
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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21038..22183
DNA (1146bp) protein (382aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA53_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Tetratricopeptide TPR_1 repeat-containing protein
13_2_20cm_2_scaffold_372_25
Candidatus Acetothermus autotrophicum, Candidatus Acetothermum, Acetothermia, Bacteria

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comp(22221..22607)
DNA (387bp) protein (129aa)
Hypothetical conserved protein n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SRP8_9BACT
Hypothetical conserved protein {ECO:0000313|EMBL:BAL58765.1}; TaxID=1446466 species="Bacteria; Acetothermia; Candidatus Acetothermum.;" source="Candidatus Acetothermus autotrophicum.;"
DoxX family protein
13_2_20cm_2_scaffold_372_26
Planktothrix agardhii, Planktothrix, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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comp(22604..22969)
DNA (366bp) protein (122aa)
S-adenosylmethionine decarboxylase proenzyme {ECO:0000256|HAMAP-Rule:MF_00464}; Short=AdoMetDC {ECO:0000256|HAMAP-Rule:MF_00464};; Short=SAMDC {ECO:0000256|HAMAP-Rule:MF_00464};; EC=4.1.1.50 {ECO:0000
S-adenosylmethionine decarboxylase related protein
13_2_20cm_2_scaffold_372_27
unknown

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comp(22970..24073)
DNA (1104bp) protein (368aa)

This feature has no annotations

13_2_20cm_2_scaffold_372_28
Geobacillus sp. JF8, Geobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(24082..24864)
DNA (783bp) protein (261aa)
Uncharacterized protein n=1 Tax=Geobacillus sp. JF8 RepID=S5YWT4_9BACI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGT31169.1}; TaxID=1345697 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Geobacillus.;" source="Geobacillus sp. JF8.;"
13_2_20cm_2_scaffold_372_29
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(24865..25323)
DNA (459bp) protein (153aa)
Cyclic nucleotide-binding domain-containing protein n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MHI7_CORCM
cyclic nucleotide-binding domain-containing protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
cyclic nucleotide-binding domain-containing protein
13_2_20cm_2_scaffold_372_30
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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25360..25887
DNA (528bp) protein (176aa)
pgsA2; CDP-alcohol phosphatidyltransferase; K00995 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] Tax=GWC2_Gemmatimonadetes_71_10_curated
CDP-alcohol phosphatidyltransferase family protein n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MUZ5_CORCM
CDP-alcohol phosphatidyltransferase family protein
Displaying items 1-30 of 39 in total

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