ggKbase home page

13_2_20cm_2_scaffold_3941

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_2_scaffold_3941_1
unknown

Not on your lists

comp(1..153)
DNA (153bp) protein (51aa)

This feature has no annotations

13_2_20cm_2_scaffold_3941_2
Candidatus Parvarchaeum acidiphilum, Candidatus Parvarchaeum, Parvarchaeota, Archaea

Not on your lists

314..622
DNA (309bp) protein (103aa)
DNA polymerase beta domain protein region {ECO:0000313|EMBL:EEZ92546.1}; TaxID=662760 species="Archaea; Parvarchaeota; Candidatus Parvarchaeum.;" source="Candidatus Parvarchaeum acidiphilum ARMAN-4.;"
13_2_20cm_2_scaffold_3941_3
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

783..1340
DNA (558bp) protein (186aa)
Putative uncharacterized protein Tax=RBG_16_Euryarchaeota_67_27_curated
13_2_20cm_2_scaffold_3941_4
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(1422..2270)
DNA (849bp) protein (283aa)
Luciferase-like monooxygenase family protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IHT3_NITGG
luciferase-like monooxygenase family protein
Luciferase-like monooxygenase family protein {ECO:0000313|EMBL:AFU59500.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" so
13_2_20cm_2_scaffold_3941_5
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

2467..3090
DNA (624bp) protein (208aa)
Metal-sulfur cluster biosynthetic enzyme n=1 Tax=Cenarchaeum symbiosum (strain A) RepID=A0RZ10_CENSY
DUF59 domain-containing protein
Putative metal-sulfur cluster biosynthetic enzyme {ECO:0000313|EMBL:AIF83045.1}; TaxID=1459636 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.
13_2_20cm_2_scaffold_3941_6
RBG_16_KB1_OP1_55_9_curated, KB1, Bacteria

Not on your lists

3139..3840
DNA (702bp) protein (234aa)
type 12 methyltransferase Tax=RBG_16_KB1_OP1_55_9_curated
Methyltransferase type 11 id=5799920 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
type 12 methyltransferase
13_2_20cm_2_scaffold_3941_7
unknown

Not on your lists

4009..4200
DNA (192bp) protein (64aa)

This feature has no annotations

13_2_20cm_2_scaffold_3941_8
Lachnospiraceae bacterium 6_1_37FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4351..4875)
DNA (525bp) protein (175aa)
GNAT family acetyltransferase n=1 Tax=Butyrivibrio sp. NC2007 RepID=UPI0003B3411C
Uncharacterized protein {ECO:0000313|EMBL:EGC75364.1}; TaxID=658656 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_37FAA.;"
hypothetical protein
13_2_20cm_2_scaffold_3941_9
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

Not on your lists

comp(4899..5408)
DNA (510bp) protein (170aa)
beta-lactamase n=1 Tax=Candidatus Nitrosoarchaeum limnia RepID=UPI00026CE38F
metallo-beta-lactamase superfamily hydrolase Tax=RBG_16_Thaumarchaeota_49_8_curated
RNA-metabolising metallo-beta-lactamase
13_2_20cm_2_scaffold_3941_10
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

Not on your lists

comp(5365..6069)
DNA (705bp) protein (235aa)
Hydrolase of the metallo-beta-lactamase superfamily n=1 Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CXT5_9ARCH
metallo-beta-lactamase superfamily hydrolase Tax=RBG_16_Thaumarchaeota_49_8_curated
hypothetical protein
13_2_20cm_2_scaffold_3941_11
Methanobacterium formicicum, Methanobacterium, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6517..6831)
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Methanobacterium formicicum DSM 3637 RepID=K2RSG0_METFO
Uncharacterized protein {ECO:0000313|EMBL:EKF85705.1}; TaxID=1204725 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobacterium.;" source="Methanobacte
hypothetical protein
13_2_20cm_2_scaffold_3941_12
unknown

Not on your lists

6937..7641
DNA (705bp) protein (235aa)

This feature has no annotations

13_2_20cm_2_scaffold_3941_13
unknown

Not on your lists

7727..8308
DNA (582bp) protein (194aa)

This feature has no annotations

13_2_20cm_2_scaffold_3941_14
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

comp(8315..8614)
DNA (300bp) protein (100aa)
Uncharacterized protein n=2 Tax=Pyrococcus furiosus RepID=Q8U0V5_PYRFU
PadR family transcriptional regulator Tax=RBG_13_Bathyarchaeota_38_9_curated
Transcriptional regulator, PadR family
13_2_20cm_2_scaffold_3941_15
RBG_13_Chloroflexi_68_17_curated, Chloroflexi, Bacteria

Not on your lists

8911..9894
DNA (984bp) protein (328aa)
thrC; threonine synthase (EC:4.2.3.1); K01733 threonine synthase [EC:4.2.3.1] Tax=RBG_13_Chloroflexi_68_17_curated
L-threonine synthase id=1890677 bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
threonine synthase
13_2_20cm_2_scaffold_3941_16
RBG_16_Bathyarchaeota_57_9_curated, Bathyarchaeota, Archaea

Not on your lists

9984..10520
DNA (537bp) protein (179aa)
Putative uncharacterized protein n=1 Tax=Thermoanaerobacterium xylanolyticum (strain ATCC 49914 / DSM 7097 / LX-11) RepID=F6BLL6_THEXL
hypothetical protein Tax=RBG_16_Bathyarchaeota_57_9_curated
hypothetical protein
13_2_20cm_2_scaffold_3941_17
unknown

Not on your lists

10624..10938
DNA (315bp) protein (105aa)

This feature has no annotations

13_2_20cm_2_scaffold_3941_18
unknown

Not on your lists

11496..11888
DNA (393bp) protein (131aa)

This feature has no annotations

13_2_20cm_2_scaffold_3941_19
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

Not on your lists

12075..12467
DNA (393bp) protein (131aa)
Citrate transporter n=1 Tax=Candidatus Nitrosoarchaeum limnia BG20 RepID=S2EUM1_9ARCH
arsB; arsenical pump membrane protein Tax=RBG_16_Thaumarchaeota_49_8_curated
arsB; putative arsenical pump membrane protein
13_2_20cm_2_scaffold_3941_20
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

Not on your lists

12589..13122
DNA (534bp) protein (178aa)
Putative arsenical pump membrane protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IHT6_NITGG
arsB; arsenical pump membrane protein Tax=RBG_16_Thaumarchaeota_49_8_curated
arsB; arsenical pump membrane protein
13_2_20cm_2_scaffold_3941_21
unknown

Not on your lists

13276..13758
DNA (483bp) protein (161aa)

This feature has no annotations

13_2_20cm_2_scaffold_3941_22
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

13904..14386
DNA (483bp) protein (161aa)
hypothetical protein n=1 Tax=Aigarchaeota archaeon JGI 0000001-H6 RepID=UPI000375EB43
peroxiredoxin Tax=RBG_16_Archaea_50_20_curated
bcp-4; peroxiredoxin
13_2_20cm_2_scaffold_3941_23
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(14401..15114)
DNA (714bp) protein (238aa)
hypothetical protein n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001745087
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
hypothetical protein
13_2_20cm_2_scaffold_3941_24
Ignavibacterium album, Ignavibacterium, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

15187..15747
DNA (561bp) protein (187aa)
Thioredoxin-like protein n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0ALY1_IGNAJ
thioredoxin-like protein
Thioredoxin-like protein {ECO:0000313|EMBL:AFH49988.1}; TaxID=945713 species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Ignavibacteriaceae; Ignavibacterium.;" source="Ignavibacteri
13_2_20cm_2_scaffold_3941_25
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

15823..16125
DNA (303bp) protein (101aa)
Translation initiation factor 1A n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N4C5_9ARCH
translation initiation factor IF-1 Tax=RBG_16_Archaea_50_20_curated
translation initiation factor eIF-1A
13_2_20cm_2_scaffold_3941_26
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

16167..16883
DNA (717bp) protein (239aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJG3_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF84377.1}; TaxID=1459636 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitr
13_2_20cm_2_scaffold_3941_27
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

16918..17523
DNA (606bp) protein (202aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJG3_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU58407.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
13_2_20cm_2_scaffold_3941_28
unknown

Not on your lists

comp(17613..18008)
DNA (396bp) protein (132aa)

This feature has no annotations

13_2_20cm_2_scaffold_3941_29
unknown

Not on your lists

18194..18616
DNA (423bp) protein (141aa)

This feature has no annotations

13_2_20cm_2_scaffold_3941_30
unknown

Not on your lists

18767..19030
DNA (264bp) protein (88aa)

This feature has no annotations

Displaying items 1-30 of 33 in total

View Taxonomy