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13_2_20cm_2_scaffold_415

Search features with annotation key words

Displaying items 1-30 of 64 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_2_scaffold_415_1
RBG_13_Actinobacteria_55_18_curated, Actinobacteria, Bacteria

Not on your lists

comp(1..240)
DNA (240bp) protein (80aa)
Activator of Hsp90 ATPase 1 family protein n=1 Tax=Methanobacterium sp. (strain SWAN-1) RepID=F6D321_METSW
hypothetical protein Tax=RBG_13_Actinobacteria_55_18_curated
Activator of Hsp90 ATPase 1 family protein
13_2_20cm_2_scaffold_415_2
RBG_16_Chloroflexi_52_11_curated, Chloroflexi, Bacteria

Not on your lists

comp(237..608)
DNA (372bp) protein (124aa)
Transcriptional regulator, ArsR family n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TYN0_9CHLR
ArsR family regulatory protein Tax=RBG_16_Chloroflexi_52_11_curated
ArsR family regulatory protein
13_2_20cm_2_scaffold_415_3
unknown

Not on your lists

comp(706..1302)
DNA (597bp) protein (199aa)

This feature has no annotations

13_2_20cm_2_scaffold_415_4
Methanosarcina acetivorans, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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1467..2099
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TSQ0_METAC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAM04185.1}; TaxID=188937 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina ac
13_2_20cm_2_scaffold_415_5
Methanobacterium lacus, Methanobacterium, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

2253..2810
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Methanobacterium sp. (strain AL-21) RepID=F0TAJ3_METSL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADZ10065.1}; TaxID=877455 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobacterium.;" source="Methanobacter
13_2_20cm_2_scaffold_415_6
unknown

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3856..4362
DNA (507bp) protein (169aa)

This feature has no annotations

13_2_20cm_2_scaffold_415_7
RBG_16_Archaea_50_20_curated, Archaea

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4431..4652
DNA (222bp) protein (74aa)
Tax=RBG_16_Archaea_50_20_curated
13_2_20cm_2_scaffold_415_8
RBG_16_Archaea_50_20_curated, Archaea

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4659..5057
DNA (399bp) protein (133aa)
PilT domain-containing protein Tax=RBG_16_Archaea_50_20_curated
13_2_20cm_2_scaffold_415_9
Aciduliprofundum boonei, Aciduliprofundum, Euryarchaeota, Archaea

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comp(5077..6627)
DNA (1551bp) protein (517aa)
hypothetical protein n=2 Tax=unclassified Crenarchaeota (miscellaneous) RepID=UPI00035EDE82
Radical SAM domain protein
Radical SAM domain protein {ECO:0000313|EMBL:EDY35014.1}; TaxID=439481 species="Archaea; Euryarchaeota; Aciduliprofundum.;" source="Aciduliprofundum boonei (strain DSM 19572 / T469).;"
13_2_20cm_2_scaffold_415_10
Thermaerobacter subterraneus, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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7275..7775
DNA (501bp) protein (167aa)
hypothetical protein n=1 Tax=Lewinella cohaerens RepID=UPI00035E6CA8
alkyl hydroperoxide reductase
Peroxiredoxin {ECO:0000313|EMBL:EKP94491.1}; TaxID=867903 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Thermaerobacter.;" source="Thermaerobacte
13_2_20cm_2_scaffold_415_11
unknown

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comp(7830..8069)
DNA (240bp) protein (80aa)

This feature has no annotations

13_2_20cm_2_scaffold_415_12
R_OP3X_45_10, OP3X, Bacteria

Not on your lists

8070..9842
DNA (1773bp) protein (591aa)
deoxyribonuclease IV (EC:3.1.21.2)
Hedgehog/intein hint domain-containing protein Tax=RIFCSPLOWO2_01_FULL_OP3X_45_10_curated
2-oxoglutarate ferredoxin oxidoreductase subunit beta id=4345523 bin=PER_GWC2_41_7 species=uncultured candidate division OP1 bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
13_2_20cm_2_scaffold_415_13
Methanobacterium lacus, Methanobacterium, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

9843..10538
DNA (696bp) protein (232aa)
DNA-(apurinic or apyrimidinic site) lyase (EC:4.2.99.18)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; TaxID=877455 species="
Endonuclease III n=1 Tax=Methanobacterium sp. (strain AL-21) RepID=F0TC36_METSL
13_2_20cm_2_scaffold_415_14
R_RIF_OD1_11_47_18, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(10535..10996)
DNA (462bp) protein (154aa)
Histidine triad protein n=2 Tax=Crenarchaeota RepID=H5SVY5_9CREN
putative histidine triad (HIT) protein; K02503 Hit-like protein involved in cell-cycle regulation Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_11_47_18_curated
histidine triad (HIT) protein
13_2_20cm_2_scaffold_415_15
Roseiflexus sp. RS-1, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(10980..11522)
DNA (543bp) protein (181aa)
ATP:cob(I)alamin adenosyltransferase n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UUR4_ROSS1
ATP--cobalamin adenosyltransferase
ATP:cob(I)alamin adenosyltransferase {ECO:0000313|EMBL:ABQ90367.1}; TaxID=357808 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Ro
13_2_20cm_2_scaffold_415_16
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

11641..12702
DNA (1062bp) protein (354aa)
hypothetical protein n=2 Tax=unclassified Crenarchaeota RepID=UPI00037F89B9
radical SAM protein Tax=CSP1_1_Thaumarchaeota
radical SAM domain-containing protein
13_2_20cm_2_scaffold_415_17

Not on your lists

13154..14332
DNA (1179bp) protein (393aa)
Acyl-CoA dehydrogenase (ACADM, acd) {ECO:0000313|EMBL:AIF00349.1}; EC=1.3.8.7 {ECO:0000313|EMBL:AIF00349.1};; TaxID=1456000 species="Archaea; Thaumarchaeota; environmental samples.;" source="unculture
hypothetical protein n=1 Tax=candidate division YNPFFA RepID=UPI00036C819F
acyl-CoA dehydrogenase domain-containing protein
13_2_20cm_2_scaffold_415_18
unknown

Not on your lists

14492..15376
DNA (885bp) protein (295aa)

This feature has no annotations

13_2_20cm_2_scaffold_415_19
RBG_13_Bathyarchaeota_52_12_curated, Bathyarchaeota, Archaea

Not on your lists

15428..16225
DNA (798bp) protein (266aa)
Uncharacterized protein (Fragment) n=1 Tax=Thaumarchaeota archaeon SCGC AB-539-E09 RepID=M7T843_9ARCH
hypothetical protein Tax=RBG_13_Bathyarchaeota_52_12_curated
hypothetical protein
13_2_20cm_2_scaffold_415_20
unknown

Not on your lists

16378..16803
DNA (426bp) protein (142aa)

This feature has no annotations

13_2_20cm_2_scaffold_415_21
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

16852..17295
DNA (444bp) protein (148aa)
Nudix 7..137 id=1247471 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
Nudix 7..137 Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
13_2_20cm_2_scaffold_415_22
Methanosarcina acetivorans, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(17321..18256)
DNA (936bp) protein (312aa)
DNA-3-methyladenine glycosylase II n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TL35_METAC
alkA; DNA-3-methyladenine glycosylase II
DNA-3-methyladenine glycosylase II {ECO:0000313|EMBL:AAM06578.1}; TaxID=188937 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methan
13_2_20cm_2_scaffold_415_23
RBG_16_Euryarchaeota_62_10_curated, Euryarchaeota, Archaea

Not on your lists

18384..19142
DNA (759bp) protein (253aa)
Methyltransferase type 11 n=1 Tax=Thermoplasmatales archaeon Gpl RepID=T0N595_9EURY
Methylase involved in ubiquinone/menaquinone biosynthesis Tax=RBG_16_Euryarchaeota_62_10_curated
type 11 methyltransferase
13_2_20cm_2_scaffold_415_24

Not on your lists

comp(19359..20345)
DNA (987bp) protein (329aa)
Aldo/keto reductase n=1 Tax=Caldivirga maquilingensis (strain ATCC 700844 / DSM 13496 / JCM 10307 / IC-167) RepID=A8MBT2_CALMQ rbh
Uncharacterized protein {ECO:0000313|EMBL:KKN34161.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
aldo/keto reductase
13_2_20cm_2_scaffold_415_25
unknown

Not on your lists

comp(21685..22212)
DNA (528bp) protein (176aa)

This feature has no annotations

13_2_20cm_2_scaffold_415_26

Not on your lists

comp(22824..24425)
DNA (1602bp) protein (534aa)
putative formiminotransferase-cyclodeaminase (EC:2.1.2.5 4.3.1.4); K13990 glutamate formiminotransferase / formiminotetrahydrofolate cyclodeaminase [EC:2.1.2.5 4.3.1.4] id=1250805 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
putative formiminotransferase-cyclodeaminase (EC:2.1.2.5 4.3.1.4)
Uncharacterized protein {ECO:0000313|EMBL:EQB63668.1}; TaxID=1379698 species="Bacteria.;" source="candidate division Zixibacteria bacterium RBG-1.;"
13_2_20cm_2_scaffold_415_27
RBG_16_Bathyarchaeota_57_9_curated, Bathyarchaeota, Archaea

Not on your lists

comp(24422..24910)
DNA (489bp) protein (163aa)
ADP-ribose pyrophosphatase n=1 Tax=Aciduliprofundum sp. (strain MAR08-339) RepID=L0HLU2_ACIS0
hypothetical protein Tax=RBG_16_Bathyarchaeota_57_9_curated
ADP-ribose pyrophosphatase
13_2_20cm_2_scaffold_415_28
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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comp(24924..25274)
DNA (351bp) protein (117aa)
Nascent polypeptide-associated complex protein n=1 Tax=Thermoplasmatales archaeon SCGC AB-540-F20 RepID=M7T6K7_9EURY
hypothetical protein Tax=RBG_13_Bathyarchaeota_46_16b_curated
alpha-NAC-like protein
13_2_20cm_2_scaffold_415_29
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

Not on your lists

comp(25321..25806)
DNA (486bp) protein (162aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon RepID=D1JEJ9_9ARCH
PUA domain containing protein; K07398 conserved protein with predicted RNA binding PUA domain Tax=RBG_16_Bathyarchaeota_48_13_curated
PUA domain containing protein
13_2_20cm_2_scaffold_415_30
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

25880..26383
DNA (504bp) protein (168aa)
XRE family transcriptional regulator n=1 Tax=Methanobrevibacter smithii RepID=UPI00037B6B23
transcriptional regulator, xre family; K03627 putative transcription factor Tax=RBG_13_Bathyarchaeota_38_9_curated
transcription factor ( MBF1 related)
Displaying items 1-30 of 64 in total

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