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13_2_20cm_2_scaffold_437

Search features with annotation key words

Displaying items 1-30 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_2_scaffold_437_1
Methanobacterium formicicum, Methanobacterium, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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comp(1..879)
DNA (879bp) protein (293aa)
ABC transporter ATP-binding protein n=1 Tax=Methanobacterium formicicum DSM 3637 RepID=K2R2X9_METFO
ABC transporter ATP-binding protein {ECO:0000313|EMBL:EKF85592.1}; TaxID=1204725 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobacterium.;" source="
ABC transporter ATP-binding protein
13_2_20cm_2_scaffold_437_2

Not on your lists

comp(1139..1978)
DNA (840bp) protein (280aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U7A9_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:KKN27549.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
short chain dehydrogenase/reductase oxidoreductase
13_2_20cm_2_scaffold_437_3
Methanolacinia petrolearia, Methanolacinia, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

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2108..2752
DNA (645bp) protein (215aa)
Transcriptional regulator, TetR family n=1 Tax=Methanoplanus petrolearius (strain DSM 11571 / OCM 486 / SEBR 4847) RepID=E1RKK4_METP4
TetR family transcriptional regulator
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ADN35857.1}; TaxID=679926 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanomicrobiaceae; Methanolacinia.;" source="
13_2_20cm_2_scaffold_437_4
RBG_16_Archaea_50_20_curated, Archaea

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2806..3927
DNA (1122bp) protein (374aa)
zinc metalloprotease Tax=RBG_16_Archaea_50_20_curated
protease id=14631826 bin=bin9_gal15 species=Dehalococcoides mccartyi genus=Dehalococcoides taxon_order=Dehalococcoidales taxon_class=Dehalococcoidia phylum=Chloroflexi tax=bin9_gal15 organism_group=GAL15
Zn-dependent protease
13_2_20cm_2_scaffold_437_5
unknown

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4060..4431
DNA (372bp) protein (124aa)

This feature has no annotations

13_2_20cm_2_scaffold_437_6
RBG_16_Archaea_50_20_curated, Archaea

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comp(4648..6492)
DNA (1845bp) protein (615aa)
copA; copper-exporting P-type ATPase A (EC:3.6.3.-) Tax=RBG_16_Archaea_50_20_curated
copA2; copper-exporting P-type ATPase A (EC:3.6.3.-)
Copper-exporting P-type ATPase A n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJ63_NITGG
13_2_20cm_2_scaffold_437_7
unknown

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comp(6509..7726)
DNA (1218bp) protein (406aa)

This feature has no annotations

13_2_20cm_2_scaffold_437_8
unknown

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7980..8342
DNA (363bp) protein (121aa)

This feature has no annotations

13_2_20cm_2_scaffold_437_9
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8387..9244
DNA (858bp) protein (286aa)
Putative S-adenosyl-L-methionine (SAM)-dependent methyltransferase {ECO:0000313|EMBL:KFC69369.1}; EC=2.1.1.- {ECO:0000313|EMBL:KFC69369.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaprote
hypothetical protein n=1 Tax=zeta proteobacterium SCGC AB-137-I08 RepID=UPI00037D357F
putative methyltransferase
13_2_20cm_2_scaffold_437_10
unknown

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9372..9605
DNA (234bp) protein (78aa)

This feature has no annotations

13_2_20cm_2_scaffold_437_11
unknown

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comp(9628..10020)
DNA (393bp) protein (131aa)

This feature has no annotations

13_2_20cm_2_scaffold_437_12
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(10027..10530)
DNA (504bp) protein (168aa)
Putative universal stress protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IH54_NITGG
universal stress protein
Putative universal stress protein {ECO:0000313|EMBL:AFU58163.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitro
13_2_20cm_2_scaffold_437_13
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10618..11577)
DNA (960bp) protein (320aa)
Dyp-type peroxidase n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HFL2_9BRAD
Dyp-type peroxidase {ECO:0000313|EMBL:ERF83593.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DF
Dyp-type peroxidase family protein
13_2_20cm_2_scaffold_437_14
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

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11779..11976
DNA (198bp) protein (66aa)
Tax=RBG_16_Thaumarchaeota_49_8_curated
13_2_20cm_2_scaffold_437_15

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12752..13288
DNA (537bp) protein (179aa)
hypothetical protein n=1 Tax=Nodosilinea nodulosa RepID=UPI0002FCF599
Marine sediment metagenome DNA, contig: S01H1_S02451 {ECO:0000313|EMBL:GAF95594.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
Universal stress protein family protein
13_2_20cm_2_scaffold_437_16
Methanoculleus marisnigri, Methanoculleus, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

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comp(13355..14293)
DNA (939bp) protein (313aa)
carbamate kinase (EC:2.7.2.2)
Carbamate kinase n=1 Tax=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) RepID=A3CS31_METMJ
Carbamate kinase {ECO:0000256|PIRNR:PIRNR000723}; TaxID=368407 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanomicrobiaceae; Methanoculleus.;" source="Methanoculleus maris
13_2_20cm_2_scaffold_437_17

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comp(14303..15610)
DNA (1308bp) protein (436aa)
Arginine deiminase n=1 Tax=mine drainage metagenome RepID=T1AB92_9ZZZZ
Arginine deiminase {ECO:0000313|EMBL:EQD54053.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
amidinotransferase
13_2_20cm_2_scaffold_437_18
Fervidicoccus fontis, Fervidicoccus, Fervidicoccales, Thermoprotei, Crenarchaeota, Archaea

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comp(15623..16546)
DNA (924bp) protein (308aa)
Ornithine carbamoyltransferase, catabolic {ECO:0000256|HAMAP-Rule:MF_01109}; Short=OTCase {ECO:0000256|HAMAP-Rule:MF_01109};; EC=2.1.3.3 {ECO:0000256|HAMAP-Rule:MF_01109};; TaxID=1163730 species="Arch
Ornithine carbamoyltransferase, catabolic n=1 Tax=Fervidicoccus fontis (strain DSM 19380 / VKM B-2539 / Kam940) RepID=I0A1N8_FERFK
ornithine carbamoyltransferase
13_2_20cm_2_scaffold_437_19

Not on your lists

16695..17699
DNA (1005bp) protein (335aa)
Phosphoesterase {ECO:0000313|EMBL:CCC55529.1}; EC=3.1.4.3 {ECO:0000313|EMBL:CCC55529.1};; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
Phosphoesterase n=1 Tax=uncultured archaeon RepID=G3C937_9ARCH
acid phosphatase
13_2_20cm_2_scaffold_437_20
Geoglobus acetivorans, Geoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

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17822..19054
DNA (1233bp) protein (411aa)
Sodium/proton antiporter, CPA1 family n=1 Tax=Archaeoglobus sulfaticallidus PM70-1 RepID=N0BNM4_9EURY
Na/H antiporter
Na /H antiporter {ECO:0000313|EMBL:AIY89598.1}; TaxID=565033 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Geoglobus.;" source="Geoglobus acetivorans.;"
13_2_20cm_2_scaffold_437_21
unknown

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comp(19069..19515)
DNA (447bp) protein (149aa)

This feature has no annotations

13_2_20cm_2_scaffold_437_22
unknown

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19875..20051
DNA (177bp) protein (59aa)

This feature has no annotations

13_2_20cm_2_scaffold_437_23
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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20123..20686
DNA (564bp) protein (188aa)
Dinucleotide-binding protein n=1 Tax=Haloferax gibbonsii ATCC 33959 RepID=M0HJH7_9EURY
NADP oxidoreductase, coenzyme F420-dependent; K06988 Tax=RBG_16_Euryarchaeota_68_12_curated
hypothetical protein
13_2_20cm_2_scaffold_437_24

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comp(20730..21797)
DNA (1068bp) protein (356aa)
High-affinity nickel-transporter n=1 Tax=mine drainage metagenome RepID=T1D5S9_9ZZZZ rbh
High-affinity nickel-transporter {ECO:0000313|EMBL:EQD76844.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
high-affinity nickel-transporter
13_2_20cm_2_scaffold_437_25

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21936..22352
DNA (417bp) protein (139aa)
Putative nickel-responsive regulator n=1 Tax=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) RepID=NIKR_ARCFU
Marine sediment metagenome DNA, contig: S03H2_S10577 {ECO:0000313|EMBL:GAH69409.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
putative transcriptional regulator with CopG/Arc/MetJ DNA-binding domain and metal-binding domain
13_2_20cm_2_scaffold_437_26
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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22386..24410
DNA (2025bp) protein (675aa)
Putative uncharacterized protein n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GBT6_GEOUR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ24956.1}; Flags: Precursor;; TaxID=351605 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="
13_2_20cm_2_scaffold_437_27
unknown

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25213..25935
DNA (723bp) protein (241aa)

This feature has no annotations

13_2_20cm_2_scaffold_437_28
Thermobaculum terrenum, Thermobaculum, Bacteria

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comp(25997..26404)
DNA (408bp) protein (136aa)
SUF system FeS assembly protein, NifU family n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CCT6_THET1
NifU family SUF system FeS assembly protein
SUF system FeS assembly protein, NifU family {ECO:0000313|EMBL:ACZ42601.1}; TaxID=525904 species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798 / YNP1).;"
13_2_20cm_2_scaffold_437_29
RBG_16_Archaea_50_20_curated, Archaea

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comp(26401..27672)
DNA (1272bp) protein (424aa)
sufS; cysteine desulfurase/selenocysteine lyase (EC:2.8.1.7) Tax=RBG_16_Archaea_50_20_curated
sufS; cysteine desulfurase/selenocysteine lyase (EC:2.8.1.7)
Cysteine desulfurase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IMM7_NITGG
13_2_20cm_2_scaffold_437_30
Kyrpidia tusciae, Kyrpidia, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(27730..28110)
DNA (381bp) protein (127aa)
Iron-sulfur cluster assembly accessory protein n=1 Tax=Kyrpidia tusciae (strain DSM 2912 / NBRC 15312 / T2) RepID=D5WQG2_KYRT2
iron-sulfur cluster assembly accessory protein
Iron-sulfur cluster assembly accessory protein {ECO:0000313|EMBL:ADG06571.1}; TaxID=562970 species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Kyrpidia.;" source="Kyrpidia tusciae
Displaying items 1-30 of 41 in total

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