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13_2_20cm_2_scaffold_4584

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_2_scaffold_4584_1
unknown

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comp(1..339)
DNA (339bp) protein (113aa)

This feature has no annotations

13_2_20cm_2_scaffold_4584_2
Thermosinus carboxydivorans, Thermosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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552..965
DNA (414bp) protein (138aa)
Lytic transglycosylase, catalytic n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HN37_9FIRM
Lytic transglycosylase, catalytic {ECO:0000313|EMBL:EAX48664.1}; TaxID=401526 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Thermosinus.;" source="Thermosinus carboxy
peptidoglycan-binding LysM
13_2_20cm_2_scaffold_4584_3
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

Not on your lists

comp(962..1750)
DNA (789bp) protein (263aa)
HTH-type transcriptional regulator CelR n=3 Tax=Thermobifida fusca RepID=CELR_THEFU
LacI family transcriptional regulator Tax=RBG_16_RIF_CHLX_70_13_curated
LacI family transcription regulator
13_2_20cm_2_scaffold_4584_4
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(2265..3266)
DNA (1002bp) protein (334aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
hypothetical protein id=14629589 bin=bin8_Chloro species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=bin8_Chloro organism_group=Chloroflexi
hypothetical protein
13_2_20cm_2_scaffold_4584_5
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(3269..3868)
DNA (600bp) protein (200aa)
Transcriptional regulator, MerR family n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TRD3_9CHLR id=1247688 bin=RBG9 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
MerR family transcriptional regulator Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
MerR family transcriptional regulator
13_2_20cm_2_scaffold_4584_6
Streptomyces bingchenggensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3936..4376
DNA (441bp) protein (147aa)
Putative transcriptional regulator n=1 Tax=Streptomyces bingchenggensis (strain BCW-1) RepID=D7C5K6_STRBB
putative transcriptional regulator
Putative transcriptional regulator {ECO:0000313|EMBL:ADI10394.1}; TaxID=749414 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces bingchenggen
13_2_20cm_2_scaffold_4584_7
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(4396..5634)
DNA (1239bp) protein (413aa)
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI0003656273
paaK; phenylacetate-CoA ligase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
paaK; phenylacetate-CoA ligase
13_2_20cm_2_scaffold_4584_8
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(5594..6928)
DNA (1335bp) protein (445aa)
aminotransferase (EC:2.6.1.-); K15372 taurine---2-oxoglutarate transaminase [EC:2.6.1.55] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
aminotransferase (EC:2.6.1.-)
4-aminobutyrate aminotransferase family protein n=1 Tax=uncultured prokaryote RepID=H5SL80_9ZZZZ
13_2_20cm_2_scaffold_4584_9
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6939..7685)
DNA (747bp) protein (249aa)
Putative transcriptional regulator, RpiR family n=1 Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2AU61_STRRD
RpiR family transcriptional regulator
Putative transcriptional regulator, RpiR family {ECO:0000313|EMBL:ACZ90516.1}; TaxID=479432 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="S
13_2_20cm_2_scaffold_4584_10
GWA2_OD1_53_7_partial, Giovannonibacteria, Parcubacteria, Bacteria

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7824..8414
DNA (591bp) protein (197aa)
Predicted glutamine amidotransferases n=1 Tax=Chthonomonas calidirosea T49 RepID=S0EYN3_9BACT
Glutamine amidotransferase class-I domain protein Tax=GWA2_OD1_53_7_partial
Predicted glutamine amidotransferases
13_2_20cm_2_scaffold_4584_11
Cedecea davisae, Cedecea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8442..8678)
DNA (237bp) protein (79aa)
Autoinducer 2 kinase LsrK n=1 Tax=Cedecea davisae DSM 4568 RepID=S3K6B0_9ENTR
Autoinducer 2 kinase LsrK {ECO:0000313|EMBL:EPF20604.1}; TaxID=566551 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Cedecea.;" source="Cedecea davisae
autoinducer kinase
13_2_20cm_2_scaffold_4584_12
RBG_16_Chloroflexi_48_8_curated, Chloroflexi, Bacteria

Not on your lists

comp(8675..9793)
DNA (1119bp) protein (373aa)
Xylulokinase n=1 Tax=Eubacterium limosum (strain KIST612) RepID=E3GK78_EUBLK
xylulokinase Tax=RBG_16_Chloroflexi_48_8_curated
xylulokinase
13_2_20cm_2_scaffold_4584_13
CG_Elusi_02, Elusimicrobia, Bacteria

Not on your lists

comp(9790..10842)
DNA (1053bp) protein (351aa)
zinc-containing alcohol dehydrogenase (EC:1.1.1.-) Tax=CG_Elusi_02
L-threonine 3-dehydrogenase (EC:1.1.1.103)
hypothetical protein n=1 Tax=candidate division OP9 bacterium OP9-cSCG RepID=UPI0003607701
13_2_20cm_2_scaffold_4584_14
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(10839..11681)
DNA (843bp) protein (281aa)
aroF; 2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase (EC:4.1.2.13); K01623 fructose-bisphosphate aldolase, class I [EC:4.1.2.13] Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
aroF; 2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase (EC:4.1.2.13)
2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8IAP0_METCZ
13_2_20cm_2_scaffold_4584_15
RBG_13_Chloroflexi_68_17_curated, Chloroflexi, Bacteria

Not on your lists

comp(11678..12439)
DNA (762bp) protein (254aa)
Transcriptional regulator n=1 Tax=Mycobacterium smegmatis JS623 RepID=L0IV29_MYCSM
PhnF; transcriptional regulator; K03710 GntR family transcriptional regulator Tax=RBG_13_Chloroflexi_68_17_curated
transcriptional regulator
13_2_20cm_2_scaffold_4584_16
Mycobacterium smegmatis, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12621..14231
DNA (1611bp) protein (537aa)
Ethanolamine:proton symporter, EAT family n=1 Tax=Mycobacterium smegmatis JS623 RepID=L0ITB4_MYCSM
ethanolamine:proton symporter, EAT family
Ethanolamine:proton symporter, EAT family {ECO:0000313|EMBL:AGB22780.1}; TaxID=710686 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium sme
13_2_20cm_2_scaffold_4584_17
Candidatus Microthrix parvicella, Candidatus Microthrix, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14313..15512
DNA (1200bp) protein (400aa)
Putative glutamate--ammonia ligase {ECO:0000313|EMBL:CCM64895.1}; EC=6.3.1.2 {ECO:0000313|EMBL:CCM64895.1};; TaxID=1229780 species="Bacteria; Actinobacteria; Candidatus Microthrix.;" source="Candidatu
L-glutamine synthetase (EC:6.3.1.2)
Putative glutamate--ammonia ligase n=1 Tax=Candidatus Microthrix parvicella RN1 RepID=R4Z2L8_9ACTN
13_2_20cm_2_scaffold_4584_18
Rubrobacter radiotolerans, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

15550..16317
DNA (768bp) protein (256aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AR80_RUBXD
Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
Dehydrogenases with different specificities (Related to short-chain alcohol dehydrogenases) {ECO:0000313|EMBL:AHY48031.1}; TaxID=42256 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales
13_2_20cm_2_scaffold_4584_19
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16481..16831
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LQU3_ACIC1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABK51803.1}; Flags: Precursor;; TaxID=351607 species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulol
13_2_20cm_2_scaffold_4584_20
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16867..17529
DNA (663bp) protein (221aa)
AzlC family protein n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8X8R1_NAKMY
AzlC family protein
AzlC family protein {ECO:0000313|EMBL:ACV79116.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099
13_2_20cm_2_scaffold_4584_21
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17526..17825
DNA (300bp) protein (100aa)
hypothetical protein n=1 Tax=Actinopolymorpha alba RepID=UPI00037CCA32
branched-chain amino acid transport
Branched-chain amino acid transport {ECO:0000313|EMBL:ACV79115.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (str
13_2_20cm_2_scaffold_4584_22
unknown

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17908..18237
DNA (330bp) protein (110aa)

This feature has no annotations

13_2_20cm_2_scaffold_4584_23
Streptomycetaceae bacterium MP113-05, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18294..18728
DNA (435bp) protein (145aa)
putative acetyltransferase (EC:2.3.1.-)
Uncharacterized protein n=1 Tax=Streptomycetaceae bacterium MP113-05 RepID=V6KYH4_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EST37063.1}; TaxID=1380770 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae.;" source="Streptomycetaceae bacterium MP113-05.;"
13_2_20cm_2_scaffold_4584_24
RBG_16_KB1_OP1_55_9_curated, KB1, Bacteria

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comp(18709..20532)
DNA (1824bp) protein (608aa)
pepF; oligopeptidase F; K08602 oligoendopeptidase F [EC:3.4.24.-] Tax=RBG_16_KB1_OP1_55_9_curated
Oligoendopeptidase F n=2 Tax=uncultured candidate division OP1 bacterium RepID=H5SR23_9BACT
pepF; oligopeptidase F
13_2_20cm_2_scaffold_4584_25
Streptomyces sp. AA4, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20547..21293
DNA (747bp) protein (249aa)
Lipase/esterase n=1 Tax=Streptomyces sp. AA4 RepID=D9VB17_9ACTO
Lipase/esterase {ECO:0000313|EMBL:EFL09866.1}; TaxID=591158 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. AA4.;"
alpha/beta hydrolase
Displaying 25 items

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