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13_2_20cm_2_scaffold_478

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_2_scaffold_478_1
Mastigocladus laminosus, Mastigocladus, Stigonematales, Cyanobacteria, Bacteria

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1..264
DNA (264bp) protein (88aa)
Uncharacterized protein {ECO:0000313|EMBL:KIY11989.1}; TaxID=1594576 species="Bacteria; Cyanobacteria; Stigonematales; Mastigocladus.;" source="Mastigocladus laminosus UU774.;"
13_2_20cm_2_scaffold_478_2
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists


comp(292..696)
DNA (405bp) protein (135aa)
30S ribosomal protein S9 n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IU83_KORVE
30S ribosomal protein S9
30S ribosomal protein S9 {ECO:0000256|HAMAP-Rule:MF_00532, ECO:0000256|RuleBase:RU003816}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;"
13_2_20cm_2_scaffold_478_3
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists


comp(785..1225)
DNA (441bp) protein (147aa)
50S ribosomal protein L13 n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=RL13_KORVE
rplM; 50S ribosomal protein L13
50S ribosomal protein L13 {ECO:0000255|HAMAP-Rule:MF_01366}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis
13_2_20cm_2_scaffold_478_4
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(1315..2409)
DNA (1095bp) protein (365aa)
ABC efflux pump, inner membrane subunit n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IU86_KORVE rbh
efflux ABC transporter inner membrane protein
ABC efflux pump, inner membrane subunit {ECO:0000313|EMBL:ABF39564.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter v
13_2_20cm_2_scaffold_478_5
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(2443..3366)
DNA (924bp) protein (308aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IU87_KORVE rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF39563.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strai
13_2_20cm_2_scaffold_478_6
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(3436..4455)
DNA (1020bp) protein (340aa)
Aminodeoxychorismate lyase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IU88_KORVE
aminodeoxychorismate lyase
Aminodeoxychorismate lyase {ECO:0000313|EMBL:ABF39562.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koriba
13_2_20cm_2_scaffold_478_7
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(4512..4802)
DNA (291bp) protein (97aa)
Putative Holliday junction resolvase {ECO:0000255|HAMAP-Rule:MF_00651}; EC=3.1.-.- {ECO:0000255|HAMAP-Rule:MF_00651};; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriacea
Putative Holliday junction resolvase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=RUVX_KORVE
Holliday junction resolvase YqgF
13_2_20cm_2_scaffold_478_8
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

4903..6114
DNA (1212bp) protein (404aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IU90_KORVE rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF39560.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strai
13_2_20cm_2_scaffold_478_9
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

6167..6886
DNA (720bp) protein (240aa)
3-deoxy-manno-octulosonate cytidylyltransferase {ECO:0000255|HAMAP-Rule:MF_00057}; EC=2.7.7.38 {ECO:0000255|HAMAP-Rule:MF_00057};; CMP-2-keto-3-deoxyoctulosonic acid synthase {ECO:0000255|HAMAP-Rule:M
3-deoxy-manno-octulosonate cytidylyltransferase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=KDSB_KORVE rbh
3-deoxy-D-manno-octulosonate cytidylyltransferase
13_2_20cm_2_scaffold_478_10
Paenibacillus mucilaginosus, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(6915..8072)
DNA (1158bp) protein (386aa)
Putative ribosome biogenesis GTPase RsgA {ECO:0000256|HAMAP-Rule:MF_01820}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_01820};; TaxID=1036673 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacill
Putative ribosome biogenesis GTPase RsgA n=1 Tax=Paenibacillus mucilaginosus (strain KNP414) RepID=F8FGV2_PAEMK
rsgA2; protein RsgA2
13_2_20cm_2_scaffold_478_11
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(8316..9479)
DNA (1164bp) protein (388aa)
Ste24 endopeptidase {ECO:0000313|EMBL:ABF39577.1}; EC=3.4.24.84 {ECO:0000313|EMBL:ABF39577.1};; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacte
Ste24 endopeptidase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IU73_KORVE
Ste24 endopeptidase
13_2_20cm_2_scaffold_478_12
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(9578..10996)
DNA (1419bp) protein (473aa)
Phosphoglucosamine mutase {ECO:0000313|EMBL:ABF39576.1}; EC=5.4.2.10 {ECO:0000313|EMBL:ABF39576.1};; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Kori
Phosphoglucosamine mutase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IU74_KORVE rbh
phosphoglucosamine mutase
13_2_20cm_2_scaffold_478_13
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(11070..12176)
DNA (1107bp) protein (369aa)
Mannose-6-phosphate isomerase, type 2 {ECO:0000313|EMBL:ABF39575.1}; EC=5.3.1.8 {ECO:0000313|EMBL:ABF39575.1};; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Cand
Mannose-6-phosphate isomerase, type 2 n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IU75_KORVE
mannose-1-phosphate guanylyltransferase
13_2_20cm_2_scaffold_478_14
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(12225..13214)
DNA (990bp) protein (330aa)
Mannose-6-phosphate isomerase, type 1 {ECO:0000313|EMBL:ABF39574.1}; EC=5.3.1.8 {ECO:0000313|EMBL:ABF39574.1};; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Cand
Mannose-6-phosphate isomerase, type 1 n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IU76_KORVE rbh
mannose-6-phosphate isomerase
13_2_20cm_2_scaffold_478_15
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(13317..14519)
DNA (1203bp) protein (401aa)
L-aspartate aminotransferase apoenzyme {ECO:0000313|EMBL:ABF39573.1}; EC=2.6.1.1 {ECO:0000313|EMBL:ABF39573.1};; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Can
L-aspartate aminotransferase apoenzyme n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IU77_KORVE
L-aspartate aminotransferase
13_2_20cm_2_scaffold_478_16
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(14516..15049)
DNA (534bp) protein (178aa)
Phosphopantetheine adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109024}; EC=2.7.7.3 {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109037};; Dephospho-CoA pyr
Phosphopantetheine adenylyltransferase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IU78_KORVE
phosphopantetheine adenylyltransferase
13_2_20cm_2_scaffold_478_17
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15162..16343)
DNA (1182bp) protein (394aa)
hypothetical protein n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B65C24
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS62507.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivor
13_2_20cm_2_scaffold_478_18
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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comp(16573..17412)
DNA (840bp) protein (280aa)
recombinase RecA n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI000366CF64
recA; recA protein
Protein RecA {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; Recombinase A {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; TaxID=240015 species="Bacteria; Acidobact
13_2_20cm_2_scaffold_478_19
unknown

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17821..17988
DNA (168bp) protein (56aa)

This feature has no annotations

13_2_20cm_2_scaffold_478_20
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

18153..19205
DNA (1053bp) protein (351aa)
Phosphoribosylformylglycinamidine cyclo-ligase {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370}; EC=6.3.3.1 {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370};; AIR synth
Phosphoribosylformylglycinamidine cyclo-ligase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IM88_KORVE rbh
phosphoribosylformylglycinamidine cyclo-ligase rbh
13_2_20cm_2_scaffold_478_21
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(19350..20933)
DNA (1584bp) protein (528aa)
Alternative thymidylate synthase-like protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1II10_KORVE rbh
alternative thymidylate synthase-like
Alternative thymidylate synthase-like protein {ECO:0000313|EMBL:ABF43490.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koriba
13_2_20cm_2_scaffold_478_22
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21125..22489)
DNA (1365bp) protein (455aa)
RNA polymerase sigma-70 factor, ECF subfamily n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GKH1_SORC5
RNA polymerase sigma-70 factor, ECF subfamily protein {ECO:0000313|EMBL:KFE72203.1}; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacterace
ECF subfamily RNA polymerase sigma factor
13_2_20cm_2_scaffold_478_23
unknown

Not on your lists

comp(22537..22911)
DNA (375bp) protein (125aa)
hypothetical protein n=1 Tax=Nonomuraea coxensis RepID=UPI00035F1F6E
DGPFAETKE family protein {ECO:0000313|EMBL:CPR22040.1}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp.
hypothetical protein
13_2_20cm_2_scaffold_478_24
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(22996..23907)
DNA (912bp) protein (304aa)
WD40-like beta Propeller n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IJL7_KORVE
Xaa-Pro aminopeptidase-like protein
WD40-like beta Propeller {ECO:0000313|EMBL:ABF42933.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribact
13_2_20cm_2_scaffold_478_25
Desulfovibrio magneticus, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24152..24457)
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1) RepID=C4XUL5_DESMR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH73466.1}; TaxID=573370 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovib
13_2_20cm_2_scaffold_478_26
Desulfarculus baarsii, Desulfarculus, Desulfarculales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24454..24774)
DNA (321bp) protein (107aa)
Addiction module killer protein n=1 Tax=Desulfarculus baarsii (strain ATCC 33931 / DSM 2075 / VKM B-1802 / 2st14) RepID=E1QK65_DESB2
addiction module killer protein
Addiction module killer protein {ECO:0000313|EMBL:ADK85958.1}; TaxID=644282 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfarculales; Desulfarculaceae; Desulfarculus.;" source="Desulfar
13_2_20cm_2_scaffold_478_27
unknown

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24894..25313
DNA (420bp) protein (140aa)

This feature has no annotations

13_2_20cm_2_scaffold_478_28
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

25465..25734
DNA (270bp) protein (90aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IHC7_KORVE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF43723.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strai
13_2_20cm_2_scaffold_478_29
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

25881..27482
DNA (1602bp) protein (534aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI0003780E92
hypothetical protein
TPR repeat protein {ECO:0000313|EMBL:ABF41243.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter ver
13_2_20cm_2_scaffold_478_30
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(27568..28248)
DNA (681bp) protein (227aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IHC8_KORVE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF43722.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacte
Displaying items 1-30 of 36 in total

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