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13_2_20cm_2_scaffold_5433

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Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_2_scaffold_5433_1
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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1..525
DNA (525bp) protein (175aa)
Putative uncharacterized protein n=1 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5IEK0_ACIB4
ribosome maturation protein SBDS-like protein; K14574 ribosome maturation protein SDO1 Tax=RBG_16_Euryarchaeota_68_13_curated
ribosome maturation protein SBDS-like protein
13_2_20cm_2_scaffold_5433_2
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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comp(593..970)
DNA (378bp) protein (126aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F7V8_CONWI
glyoxalase/bleomycin resistance protein/dioxygenase
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:ADB52852.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter
13_2_20cm_2_scaffold_5433_3
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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1129..1818
DNA (690bp) protein (230aa)
Exosome complex component Rrp4 n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T5L6_9EURY
exosome complex RNA-binding protein Rrp4 Tax=RBG_16_Euryarchaeota_68_13_curated
exosome complex RNA-binding protein Rrp4
13_2_20cm_2_scaffold_5433_4
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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1831..2661
DNA (831bp) protein (277aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00037D8B2C
exosome complex exonuclease Rrp41 Tax=RBG_16_Euryarchaeota_68_13_curated
exosome complex exonuclease Rrp41
13_2_20cm_2_scaffold_5433_5
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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2661..3440
DNA (780bp) protein (260aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00037C197A
3' exoribonuclease; K12589 exosome complex component RRP42 Tax=RBG_16_Euryarchaeota_68_13_curated
exosome complex RNA-binding protein Rrp42
13_2_20cm_2_scaffold_5433_6
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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3449..3736
DNA (288bp) protein (96aa)
50S ribosomal protein L37 n=1 Tax=Thermococcus zilligii RepID=UPI00029AEF78
50S ribosomal protein L37Ae Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
50S ribosomal protein L37ae
13_2_20cm_2_scaffold_5433_7
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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3738..3872
DNA (135bp) protein (45aa)
rpoP; DNA-directed RNA polymerase subunit P (EC:2.7.7.6) Tax=RBG_16_Euryarchaeota_68_13_curated
rpoP; DNA-directed RNA polymerase subunit P (EC:2.7.7.6)
DNA-directed RNA polymerase subunit P n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T548_9EURY
13_2_20cm_2_scaffold_5433_8
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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3875..4108
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Aciduliprofundum sp. (strain MAR08-339) RepID=L0HQE5_ACIS0
hypothetical protein Tax=RBG_16_Euryarchaeota_68_13_curated
hypothetical protein
13_2_20cm_2_scaffold_5433_9
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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4105..4473
DNA (369bp) protein (123aa)
Prefoldin subunit beta n=1 Tax=Methanoculleus sp. CAG:1088 RepID=R7PZA1_9EURY
Prefoldin beta subunit (GimC beta subunit) Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
Prefoldin beta subunit (GimC beta subunit)
13_2_20cm_2_scaffold_5433_10
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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4532..5266
DNA (735bp) protein (245aa)
Putative membrane protein n=1 Tax=Aciduliprofundum sp. (strain MAR08-339) RepID=L0HJS1_ACIS0
hypothetical protein Tax=RBG_16_Euryarchaeota_67_27_curated
hypothetical protein
13_2_20cm_2_scaffold_5433_11
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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5276..5815
DNA (540bp) protein (180aa)
tRNA pseudouridine 55 synthase (EC:4.2.1.70) Tax=RBG_16_Euryarchaeota_68_13_curated
Cytidylate kinase n=1 Tax=Aciduliprofundum sp. (strain MAR08-339) RepID=L0HNR2_ACIS0
cytidylate kinase, putative
13_2_20cm_2_scaffold_5433_12
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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5812..6549
DNA (738bp) protein (246aa)
TruB; H/ACA RNA-protein complex component Cbf5p; K11131 H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-] Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
truB; putative tRNA pseudouridine synthase B (EC:5.4.99.25)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000370E4DC
13_2_20cm_2_scaffold_5433_13
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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6546..6644
DNA (99bp) protein (33aa)
TruB; H/ACA RNA-protein complex component Cbf5p; K11131 H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-] Tax=RBG_16_Euryarchaeota_68_13_curated
13_2_20cm_2_scaffold_5433_14
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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6649..7809
DNA (1161bp) protein (387aa)
peptidase M48 Ste24p; K06013 STE24 endopeptidase [EC:3.4.24.84] Tax=RBG_16_Euryarchaeota_68_12_curated
Peptidase M48 Ste24p n=1 Tax=Dehalogenimonas lykanthroporepellens (strain ATCC BAA-1523 / JCM 15061 / BL-DC-9) RepID=D8K277_DEHLB
peptidase M48 Ste24p
13_2_20cm_2_scaffold_5433_trna_1
unknown

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7981..8087
DNA (107bp)
transferRNA
13_2_20cm_2_scaffold_5433_15
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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comp(8089..9141)
DNA (1053bp) protein (351aa)
bifunctional phosphoglucose/phosphomannose isomerase (EC:5.3.1.8); K15916 glucose/mannose-6-phosphate isomerase [EC:5.3.1.9 5.3.1.8] Tax=RBG_16_Euryarchaeota_67_27_curated
bifunctional phosphoglucose/phosphomannose isomerase (EC:5.3.1.8)
Bifunctional phosphoglucose/phosphomannose isomerase n=1 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CN91_DESK7
13_2_20cm_2_scaffold_5433_16
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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9152..10201
DNA (1050bp) protein (350aa)
3,4-dihydroxy-2-butanone 4-phosphate synthase; K02858 3,4-dihydroxy 2-butanone 4-phosphate synthase [EC:4.1.99.12] Tax=RBG_16_Euryarchaeota_67_27_curated
3,4-dihydroxy-2-butanone 4-phosphate synthase n=1 Tax=Methanocaldococcus sp. (strain FS406-22) RepID=D3S7Y2_METSF
3,4-dihydroxy-2-butanone 4-phosphate synthase
13_2_20cm_2_scaffold_5433_17
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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10215..10784
DNA (570bp) protein (190aa)
riboflavin synthase (EC:2.5.1.9); K00793 riboflavin synthase [EC:2.5.1.9] Tax=RBG_16_Euryarchaeota_68_13_curated
Riboflavin synthase n=1 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5IC31_ACIB4
riboflavin synthase
13_2_20cm_2_scaffold_5433_18
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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10781..11188
DNA (408bp) protein (136aa)
6,7-dimethyl-8-ribityllumazine synthase (EC:2.5.1.9); K00794 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
6,7-dimethyl-8-ribityllumazine synthase (EC:2.5.1.78)
6,7-dimethyl-8-ribityllumazine synthase n=2 Tax=Euryarchaeota RepID=M9SBQ9_9EURY
13_2_20cm_2_scaffold_5433_19
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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11268..11627
DNA (360bp) protein (120aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000360600D
hypothetical protein Tax=RBG_16_Euryarchaeota_67_27_curated
13_2_20cm_2_scaffold_5433_20
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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comp(11629..12135)
DNA (507bp) protein (169aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00035C82AA
putative metal-dependent phosphoesterase, PHP family Tax=RBG_16_Euryarchaeota_67_27_curated
13_2_20cm_2_scaffold_5433_21
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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12228..12668
DNA (441bp) protein (147aa)
Tax=RBG_16_Euryarchaeota_68_13_curated
13_2_20cm_2_scaffold_5433_22
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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comp(12674..14806)
DNA (2133bp) protein (711aa)
Methionine--tRNA ligase n=1 Tax=Aciduliprofundum sp. (strain MAR08-339) RepID=L0HP28_ACIS0
methionyl-tRNA synthetase Tax=RBG_16_Euryarchaeota_67_27_curated
methionyl-tRNA synthetase
13_2_20cm_2_scaffold_5433_23
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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14975..15589
DNA (615bp) protein (205aa)
Tax=RBG_16_Euryarchaeota_68_13_curated
13_2_20cm_2_scaffold_5433_24
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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15695..15988
DNA (294bp) protein (98aa)
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_2_20cm_2_scaffold_5433_25
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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16123..16575
DNA (453bp) protein (151aa)
Tax=RBG_16_Euryarchaeota_68_13_curated
13_2_20cm_2_scaffold_5433_26
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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16879..17955
DNA (1077bp) protein (359aa)
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_2_20cm_2_scaffold_5433_27
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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17989..18255
DNA (267bp) protein (89aa)
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
Displaying 28 items

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