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13_2_20cm_2_scaffold_5551

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_2_scaffold_5551_1
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(1..1215)
DNA (1215bp) protein (405aa)
Uncharacterized protein id=3824567 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Uncharacterized protein Tax=GWC2_Rokubacteria_70_16_curated
S-layer domain protein
13_2_20cm_2_scaffold_5551_2
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

1464..3467
DNA (2004bp) protein (668aa)
Putative transmembrane sensor domain protein id=2227968 bin=GWA2_Methylomirabilis_73_35 species=Desulfovibrio magneticus genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
guanylate cyclase Tax=GWA2_Rokubacteria_73_35_curated
adenylate cyclase
13_2_20cm_2_scaffold_5551_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

3498..3680
DNA (183bp) protein (61aa)
delta-1-pyrroline-5-carboxylate dehydrogenase; K00294 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.1.12] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Delta-1-pyrroline-5-carboxylate dehydrogenase id=4400728 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
delta-1-pyrroline-5-carboxylate dehydrogenase
13_2_20cm_2_scaffold_5551_4
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

3713..4990
DNA (1278bp) protein (426aa)
delta-1-pyrroline-5-carboxylate dehydrogenase; K00294 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.1.12] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
delta-1-pyrroline-5-carboxylate dehydrogenase (EC:1.5.1.12)
Delta-1-pyrroline-5-carboxylate dehydrogenase id=4400728 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_2_20cm_2_scaffold_5551_5
unknown

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5053..5229
DNA (177bp) protein (59aa)

This feature has no annotations

13_2_20cm_2_scaffold_5551_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(5269..5700)
DNA (432bp) protein (144aa)
deoxyuridine 5'-triphosphate nucleotidohydrolase (EC:3.6.1.23); K01520 dUTP pyrophosphatase [EC:3.6.1.23] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
deoxyuridine 5'-triphosphate nucleotidohydrolase (EC:3.6.1.23)
Deoxyuridine 5'-triphosphate nucleotidohydrolase id=3870909 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Frankia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_2_20cm_2_scaffold_5551_7
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(5697..6671)
DNA (975bp) protein (325aa)
NADPH:quinone reductase (EC:1.6.5.5)
hypothetical protein n=1 Tax=Alicyclobacillus pohliae RepID=UPI00036337AF
alcohol dehydrogenase, zinccontaining, putative Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
13_2_20cm_2_scaffold_5551_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

6744..7841
DNA (1098bp) protein (366aa)
acyl-CoA transferase/carnitine dehydratase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Predicted acyl-CoA transferase/carnitine dehydratase id=3870908 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Magnetospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
L-carnitine dehydratase/bile acid-inducible protein F
13_2_20cm_2_scaffold_5551_9
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(7808..9757)
DNA (1950bp) protein (650aa)
peptidase S1 and S6, chymotrypsin/Hap Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Peptidase S1 and S6, chymotrypsin/Hap id=3870880 bin=GWA2_Methylomirabilis_73_35 species=Paenibacillus mucilaginosus genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
peptidase S1
13_2_20cm_2_scaffold_5551_10
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

9817..10488
DNA (672bp) protein (224aa)
hypothetical protein
Putative uncharacterized protein id=3870875 bin=GWA2_Methylomirabilis_73_35 species=alpha proteobacterium BAL199 genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Putative uncharacterized protein Tax=GWA2_Rokubacteria_73_35_curated
13_2_20cm_2_scaffold_5551_11
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

10538..10927
DNA (390bp) protein (130aa)
Putative fluoride ion transporter CrcB n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HGD5_ANADF
camphor resistance protein CrcB; K06199 CrcB protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
camphor resistance protein CrcB
13_2_20cm_2_scaffold_5551_12
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

comp(10967..11503)
DNA (537bp) protein (179aa)
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
hypothetical protein id=14627061 bin=bin7_NC10_sister species=Limnohabitans sp. Rim28 genus=Limnohabitans taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
13_2_20cm_2_scaffold_5551_13
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(11512..13083)
DNA (1572bp) protein (524aa)
putative peptidase M1, membrane alanine aminopeptidase (EC:3.4.11.2) Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
putative peptidase M1, membrane alanine aminopeptidase (EC:3.4.11.2)
Putative Peptidase M1, membrane alanine aminopeptidase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PA72_9BACT
13_2_20cm_2_scaffold_5551_14
unknown

Not on your lists

13286..14113
DNA (828bp) protein (276aa)

This feature has no annotations

13_2_20cm_2_scaffold_5551_15
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

14079..15248
DNA (1170bp) protein (390aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Uncharacterized protein id=2558561 bin=GWA2_Methylomirabilis_73_35 species=Hydrocarboniphaga effusa genus=Hydrocarboniphaga taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_2_20cm_2_scaffold_5551_16
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(15451..16485)
DNA (1035bp) protein (345aa)
Gamma-glutamyltransferase n=1 Tax=Desulfovibrio fructosivorans JJ RepID=E1JYG5_DESFR
ggt; gamma-glutamyltranspeptidase Tax=GWA2_Rokubacteria_73_35_curated
gamma-glutamyltranspeptidase
13_2_20cm_2_scaffold_5551_17
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(16988..17767)
DNA (780bp) protein (260aa)
hypothetical protein n=1 Tax=Verrucomicrobium sp. 3C RepID=UPI00037CAF4B
ubiquinone/menaquinone biosynthesis methyltransferase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
hypothetical protein
13_2_20cm_2_scaffold_5551_18
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

17912..18205
DNA (294bp) protein (98aa)
Coenzyme PQQ synthesis protein D (PqqD) n=1 Tax=Nostoc sp. (strain ATCC 29411 / PCC 7524) RepID=K9QLT6_NOSS7
coenzyme PQQ biosynthesis protein PqqD Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
coenzyme PQQ biosynthesis protein PqqD
13_2_20cm_2_scaffold_5551_19
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

18183..18695
DNA (513bp) protein (171aa)
Putative uncharacterized protein n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LH36_CHLTF
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hypothetical protein
13_2_20cm_2_scaffold_5551_20
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

18692..20599
DNA (1908bp) protein (636aa)
UPI0003CFBECB related cluster n=1 Tax=unknown RepID=UPI0003CFBECB rbh
asparagine synthase (glutamine-hydrolyzing) Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
asparagine synthase
13_2_20cm_2_scaffold_5551_21
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

20599..20754
DNA (156bp) protein (52aa)
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
13_2_20cm_2_scaffold_5551_22
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

Not on your lists

20792..21952
DNA (1161bp) protein (387aa)
putative RNA methylase (EC:2.1.1.-); K11434 protein arginine N-methyltransferase 1 [EC:2.1.1.-] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
putative RNA methylase (EC:2.1.1.-)
UPI0003D0685D related cluster n=1 Tax=unknown RepID=UPI0003D0685D
13_2_20cm_2_scaffold_5551_23
unknown

Not on your lists

comp(22505..22783)
DNA (279bp) protein (93aa)

This feature has no annotations

13_2_20cm_2_scaffold_5551_24
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

22899..23948
DNA (1050bp) protein (350aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
13_2_20cm_2_scaffold_5551_25
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

23959..24477
DNA (519bp) protein (173aa)
hypothetical protein; K06962 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative uncharacterized protein id=3986310 bin=GWA2_Methylomirabilis_73_35 species=Desulfococcus oleovorans genus=Desulfococcus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_2_20cm_2_scaffold_5551_26
unknown

Not on your lists

24509..24631
DNA (123bp) protein (41aa)

This feature has no annotations

13_2_20cm_2_scaffold_5551_27
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

24693..25163
DNA (471bp) protein (157aa)
micrococcal nuclease-like protein; K01174 micrococcal nuclease [EC:3.1.31.1] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Thermonuclease id=3986306 bin=GWA2_Methylomirabilis_73_35 species=Desmospora sp. 8437 genus=Desmospora taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
micrococcal nuclease-like protein
13_2_20cm_2_scaffold_5551_28
Nocardioidaceae bacterium Broad-1, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25174..25599)
DNA (426bp) protein (142aa)
Putative acetyltransferase n=1 Tax=Streptomyces venezuelae (strain ATCC 10712 / CBS 650.69 / DSM 40230 / JCM 4526 / NBRC 13096 / PD 04745) RepID=F2RA36_STRVP
putative acetyltransferase
Acetyltransferase {ECO:0000313|EMBL:EGD43478.1}; TaxID=408672 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae.;" source="Nocardioidaceae bacterium Broad-1.;"
13_2_20cm_2_scaffold_5551_29
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

25678..27309
DNA (1632bp) protein (544aa)
2-oxoacid ferredoxin oxidoreductase; K04090 indolepyruvate ferredoxin oxidoreductase [EC:1.2.7.8] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Indolepyruvate ferredoxin oxidoreductase id=3986305 bin=GWA2_Methylomirabilis_73_35 species=Streptosporangium roseum genus=Streptosporangium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
2-oxoacid ferredoxin oxidoreductase
Displaying 29 items

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