ggKbase home page

13_2_20cm_2_scaffold_5746

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_2_scaffold_5746_1
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

Not on your lists

1..783
DNA (783bp) protein (261aa)
formate dehydrogenase family accessory protein FdhD id=14630474 bin=bin8_Chloro species=Singulisphaera acidiphila genus=Singulisphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=bin8_Chloro organism_group=Chloroflexi
formate dehydrogenase family accessory protein FdhD Tax=CSP1_4_Chloroflexi
fdhD1; FdhD-like protein
13_2_20cm_2_scaffold_5746_2
unknown

Not on your lists

780..1250
DNA (471bp) protein (157aa)

This feature has no annotations

13_2_20cm_2_scaffold_5746_3
unknown

Not on your lists

1247..1969
DNA (723bp) protein (241aa)

This feature has no annotations

13_2_20cm_2_scaffold_5746_4
Arthrobacter nitrophenolicus, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1966..2388)
DNA (423bp) protein (141aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Arthrobacter sp. SJCon RepID=L8TPJ7_9MICC
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:ELT45198.1}; TaxID=683150 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter nitrophenolicus.;
dihydrofolate reductase
13_2_20cm_2_scaffold_5746_5
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(2523..3263)
DNA (741bp) protein (247aa)
Phenylacetic acid catabolic family protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TFW1_9CHLR
Phenylacetic acid catabolic family protein {ECO:0000313|EMBL:EFH90594.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="
phenylacetic acid catabolic
13_2_20cm_2_scaffold_5746_6
unknown

Not on your lists

comp(3260..3481)
DNA (222bp) protein (74aa)

This feature has no annotations

13_2_20cm_2_scaffold_5746_7
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(3478..3783)
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TFW3_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:EFH90596.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racem
benzoyl-CoA oxygenase component B
13_2_20cm_2_scaffold_5746_8
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(3780..4268)
DNA (489bp) protein (163aa)
phenylacetic acid catabolic family protein; K02609 ring-1,2-phenylacetyl-CoA epoxidase subunit PaaA [EC:1.14.13.149] Tax=RBG_16_Gemmatimonadetes_66_8_curated
rxy:Rxyl_1756 phenylacetic acid catabolic; K02609 ring-1,2-phenylacetyl-CoA epoxidase subunit PaaA [EC:1.14.13.149] id=1247841 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
phenylacetic acid catabolic
13_2_20cm_2_scaffold_5746_9
Natronococcus occultus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4268..4606)
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=Natronococcus occultus SP4 RepID=L0JWA3_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB36595.1}; TaxID=694430 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus occultus SP4.;"
13_2_20cm_2_scaffold_5746_trna_1
unknown

Not on your lists

4678..4750
DNA (73bp)
transferRNA
13_2_20cm_2_scaffold_5746_10
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5087..5761)
DNA (675bp) protein (225aa)
NADP oxidoreductase n=1 Tax=Amycolatopsis methanolica RepID=UPI00036FE271
NADP oxidoreductase coenzyme F420-dependent
NADP oxidoreductase coenzyme F420-dependent {ECO:0000313|EMBL:AIJ22439.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsi
13_2_20cm_2_scaffold_5746_11
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5754..6860)
DNA (1107bp) protein (369aa)
Alkanal monooxygenase alpha chain {ECO:0000313|EMBL:KJQ56095.1}; EC=1.14.14.3 {ECO:0000313|EMBL:KJQ56095.1};; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microba
luciferase n=1 Tax=Agromyces italicus RepID=UPI0003B35E68
putative luciferase-like monooxygenase
13_2_20cm_2_scaffold_5746_12
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6957..7457
DNA (501bp) protein (167aa)
hypothetical protein n=1 Tax=Actinomadura flavalba RepID=UPI00036E8506
regulatory protein MarR
Transcriptional regulator, MarR family {ECO:0000313|EMBL:EWM13939.1}; TaxID=345341 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
13_2_20cm_2_scaffold_5746_13
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7745..8563
DNA (819bp) protein (273aa)
Pirin-like protein n=1 Tax=Clostridium ultunense Esp RepID=M1ZAY7_9CLOT
Pirin-like protein {ECO:0000313|EMBL:CCQ94893.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
Pirin domain-containing protein
13_2_20cm_2_scaffold_5746_14
Stackebrandtia nassauensis, Stackebrandtia, Glycomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8972..9382
DNA (411bp) protein (137aa)
GCN5-related N-acetyltransferase n=1 Tax=Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC 102104 / LLR-40K-21) RepID=D3Q7S2_STANL
N-acetyltransferase GCN5
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:ADD44414.1}; TaxID=446470 species="Bacteria; Actinobacteria; Glycomycetales; Glycomycetaceae; Stackebrandtia.;" source="Stackebrandtia nassauensis (s
13_2_20cm_2_scaffold_5746_15
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9386..9766)
DNA (381bp) protein (127aa)
Uncharacterized protein n=3 Tax=Rhodococcus RepID=I0WN39_9NOCA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKT79032.1}; TaxID=1129896 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus M213.;"
13_2_20cm_2_scaffold_5746_16
Amycolatopsis vancoresmycina, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9862..10320
DNA (459bp) protein (153aa)
Oxygen-binding heme protein (Fragment) n=1 Tax=Amycolatopsis vancoresmycina DSM 44592 RepID=R1G7G1_9PSEU
oxygen-binding heme protein
Oxygen-binding heme protein {ECO:0000313|EMBL:EOD67358.1}; Flags: Fragment;; TaxID=1292037 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatop
13_2_20cm_2_scaffold_5746_17
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

10479..10796
DNA (318bp) protein (106aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IR18_KORVE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF40682.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strai
13_2_20cm_2_scaffold_5746_18
Candidatus Microthrix parvicella, Candidatus Microthrix, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10774..12462)
DNA (1689bp) protein (563aa)
hypothetical protein n=1 Tax=Candidatus Microthrix parvicella RepID=UPI0003688BF5
Uncharacterized protein {ECO:0000313|EMBL:CCM65703.1}; TaxID=1229780 species="Bacteria; Actinobacteria; Candidatus Microthrix.;" source="Candidatus Microthrix parvicella RN1.;"
Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrB
13_2_20cm_2_scaffold_5746_19
unknown

Not on your lists

12478..13545
DNA (1068bp) protein (356aa)

This feature has no annotations

13_2_20cm_2_scaffold_5746_20
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13558..14373
DNA (816bp) protein (272aa)
hypothetical protein n=1 Tax=Arthrobacter sp. 131MFCol6.1 RepID=UPI00036FD88D
phosphoesterase
Phosphoesterase {ECO:0000313|EMBL:ABK52006.1}; TaxID=351607 species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulolyticus (strain ATCC 43068 /
13_2_20cm_2_scaffold_5746_21
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

14393..15286
DNA (894bp) protein (298aa)
Pyruvate carboxyltransferase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C5D0_SPHTD
pyruvate carboxyltransferase
Pyruvate carboxyltransferase {ECO:0000313|EMBL:ACZ37446.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;"
13_2_20cm_2_scaffold_5746_22
Candidatus Brocadia sinica, Candidatus Brocadia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(15754..17664)
DNA (1911bp) protein (637aa)
carboxypeptidase Taq (EC:3.4.17.19)
Carboxypeptidase n=1 Tax=planctomycete KSU-1 RepID=I3INL5_9PLAN
Zn-dependent carboxypeptidase {ECO:0000313|EMBL:GAN34300.1}; TaxID=1197129 species="Bacteria; Planctomycetes; Planctomycetia; Candidatus Brocadiales; Candidatus Brocadiaceae; Candidatus Brocadia.;" so
13_2_20cm_2_scaffold_5746_trna_2
unknown

Not on your lists

17699..17771
DNA (73bp)
transferRNA
Displaying 24 items

View Taxonomy