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13_2_20cm_2_scaffold_734

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_2_scaffold_734_1
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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1..729
DNA (729bp) protein (243aa)
ptsI; phosphoenolpyruvate--protein phosphotransferase (EC:2.7.3.9); K08483 phosphotransferase system, enzyme I, PtsI [EC:2.7.3.9] Tax=GWC2_Gemmatimonadetes_71_10_curated
Phosphoenolpyruvate-protein phosphotransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8G5_GEMAT
phosphoenolpyruvate-protein phosphotransferase
13_2_20cm_2_scaffold_734_2
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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749..1975
DNA (1227bp) protein (409aa)
metK; S-adenosylmethionine synthetase (EC:2.5.1.6)
S-adenosylmethionine synthase {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541}; Short=AdoMet synthase {ECO:0000256|HAMAP-Rule:MF_00086};; EC=2.5.1.6 {ECO:0000256|HAMAP-Rule:MF_00086, E
S-adenosylmethionine synthase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8G6_GEMAT
13_2_20cm_2_scaffold_734_3
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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1972..3318
DNA (1347bp) protein (449aa)
adenosylhomocysteinase (EC:3.3.1.1)
Adenosylhomocysteinase n=1 Tax=delta proteobacterium NaphS2 RepID=D8FF04_9DELT
adenosylhomocysteinase Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
13_2_20cm_2_scaffold_734_4
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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3327..3827
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8G7_GEMAT
hypothetical protein; K08999 hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
protein of unknown function DUF151
13_2_20cm_2_scaffold_734_5
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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3949..4779
DNA (831bp) protein (277aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8G8_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
hypothetical protein
13_2_20cm_2_scaffold_734_6
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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5071..5970
DNA (900bp) protein (300aa)
ABC transporter substrate binding protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8G9_GEMAT
ABC transporter substrate-binding protein; K02016 iron complex transport system substrate-binding protein Tax=GWC2_Gemmatimonadetes_71_10_curated
ABC transporter substrate-binding protein
13_2_20cm_2_scaffold_734_7
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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5967..6908
DNA (942bp) protein (314aa)
Putative vitamin B12 transport protein BtuC n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5M8_GEMAT
transmembrane ABC transporter protein,permease; K02015 iron complex transport system permease protein Tax=GWC2_Gemmatimonadetes_71_10_curated
btuD; putative vitamin B12 transport protein BtuC
13_2_20cm_2_scaffold_734_8
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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6893..7696
DNA (804bp) protein (268aa)
btuC; putative vitamin B12 transport protein BtuD; K02013 iron complex transport system ATP-binding protein [EC:3.6.3.34] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Putative vitamin B12 transport protein BtuD n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5M7_GEMAT
btuC; putative vitamin B12 transport protein BtuD
13_2_20cm_2_scaffold_734_9
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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7693..9585
DNA (1893bp) protein (631aa)
Putative TonB-dependent outer membrane receptor for cobalamin and Fe transport n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MHA1_9BACT
TonB-dependent receptor
TonB-dependent receptor {ECO:0000313|EMBL:AHG90671.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_2_20cm_2_scaffold_734_10
R_WOR_2_50_17, WOR-2, Bacteria

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9613..10296
DNA (684bp) protein (228aa)
ATP-binding protein; K06927 Tax=RIFCSPHIGHO2_02_FULL_WOR_2_50_17_curated
ATP-binding protein; K06927 id=14424885 bin=bin1_lowGC species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=bin1_lowGC organism_group=Unknown_CP
protein of unknown function DUF71 ATP-binding region
13_2_20cm_2_scaffold_734_11
unknown

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10293..11333
DNA (1041bp) protein (347aa)

This feature has no annotations

13_2_20cm_2_scaffold_734_12
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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11362..12156
DNA (795bp) protein (265aa)
DNA repair protein RecO n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8H2_GEMAT
DNA repair protein recO
DNA repair protein RecO {ECO:0000256|HAMAP-Rule:MF_00201, ECO:0000256|SAAS:SAAS00018750}; Recombination protein O {ECO:0000256|HAMAP-Rule:MF_00201}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;"
13_2_20cm_2_scaffold_734_13
R_NC10_66_22, NC10, Bacteria

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12198..13931
DNA (1734bp) protein (578aa)
selB; Selenocysteine-specific elongation factor (SelB translation factor) Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
selB; Selenocysteine-specific elongation factor (SelB translation factor) id=14428725 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
selenocysteine-specific translation elongation factor SelB
13_2_20cm_2_scaffold_734_14
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

13997..14440
DNA (444bp) protein (148aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
ial:IALB_0995 hemagluttinin repeat-containing protein id=718416 bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
13_2_20cm_2_scaffold_734_15
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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14576..17200
DNA (2625bp) protein (875aa)
Chaperone ClpB n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8H4_GEMAT
Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
ATP-dependent chaperone ClpB
13_2_20cm_2_scaffold_734_16
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

17280..17708
DNA (429bp) protein (143aa)
tRNA-specific adenosine deaminase {ECO:0000256|HAMAP-Rule:MF_00972}; EC=3.5.4.33 {ECO:0000256|HAMAP-Rule:MF_00972};; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacter
hypothetical protein n=1 Tax=Methylotenera sp. 1P/1 RepID=UPI000382DBC1
CMP/dCMP deaminase zinc-binding protein
13_2_20cm_2_scaffold_734_17
unknown

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17708..18496
DNA (789bp) protein (263aa)

This feature has no annotations

13_2_20cm_2_scaffold_734_18
unknown

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comp(18502..19185)
DNA (684bp) protein (228aa)

This feature has no annotations

13_2_20cm_2_scaffold_734_19
unknown

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comp(19195..19632)
DNA (438bp) protein (146aa)

This feature has no annotations

13_2_20cm_2_scaffold_734_20
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(19629..20297)
DNA (669bp) protein (223aa)
Putative RNA polymerase sigma factor n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2QK23_9RHIZ
RNA polymerase sigma factor, sigma-70 family
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AHG88832.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_2_20cm_2_scaffold_734_21
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

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20389..21765
DNA (1377bp) protein (459aa)
tnaA; tryptophanase; K01667 tryptophanase [EC:4.1.99.1] Tax=GWC2_RIF_CHLX_73_18_curated
Tryptophanase id=2501312 bin=GWC2_Chloroflexi_73_18 species=Caldilinea aerophila genus=Caldilinea taxon_order=Caldilineales taxon_class=Caldilineae phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
tnaA; tryptophanase
13_2_20cm_2_scaffold_734_22
unknown

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comp(21768..21995)
DNA (228bp) protein (76aa)

This feature has no annotations

13_2_20cm_2_scaffold_734_23
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(22073..22501)
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8ED79_RUNSL
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
Displaying 23 items

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