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13_2_20cm_2_scaffold_784

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_2_scaffold_784_1
unknown

Not on your lists

comp(3..158)
DNA (156bp) protein (52aa)

This feature has no annotations

13_2_20cm_2_scaffold_784_2
Methylobacterium sp. 4-46, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(155..790)
DNA (636bp) protein (212aa)
Isoprenyl transferase {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_01139};; TaxID=426117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteri
Isoprenyl transferase n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UKU4_METS4
undecaprenyl pyrophosphate synthase
13_2_20cm_2_scaffold_784_3
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(819..1187)
DNA (369bp) protein (123aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00037E491F
transcriptional regulator Tax=GWC2_Gemmatimonadetes_71_10_curated
transcriptional regulator
13_2_20cm_2_scaffold_784_4
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(1180..1764)
DNA (585bp) protein (195aa)
Putative uncharacterized protein n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LJU1_CHLTF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG88547.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_2_20cm_2_scaffold_784_5
RBG_13_Aminicenantes_59_9_curated, Aminicenantes, Bacteria

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1836..2663
DNA (828bp) protein (276aa)
D-aminopeptidase DppA n=1 Tax=Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 / JW/IW-1228P) RepID=D9RZ85_THEOJ
D-aminopeptidase DppA Tax=RBG_13_Aminicenantes_59_9_curated
D-aminopeptidase DppA
13_2_20cm_2_scaffold_784_6
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

2708..3775
DNA (1068bp) protein (356aa)
Tax=GWC2_Gemmatimonadetes_71_10_curated
13_2_20cm_2_scaffold_784_7
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

3754..6555
DNA (2802bp) protein (934aa)
Outer membrane receptor protein n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0ANQ3_IGNAJ
TonB-dependent receptor Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
TonB-dependent receptor
13_2_20cm_2_scaffold_784_8
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(6552..7775)
DNA (1224bp) protein (408aa)
PHP domain protein
PHP domain protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
13_2_20cm_2_scaffold_784_9
unknown

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7801..8133
DNA (333bp) protein (111aa)

This feature has no annotations

13_2_20cm_2_scaffold_784_10
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8652..9353)
DNA (702bp) protein (234aa)
Putative transcriptional regulator n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XFI0_NAKMY
transcriptional regulator
Putative transcriptional regulator {ECO:0000313|EMBL:ACV79957.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (stra
13_2_20cm_2_scaffold_784_11
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

9446..10624
DNA (1179bp) protein (393aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase id=24466825 bin=RBG_19FT_COMBO_GAL15_69_19 species=Methylobacter tundripaludum genus=Methylobacter taxon_order=Methylococcales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
FAD-dependent pyridine nucleotide-disulfide oxidoreductase Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
13_2_20cm_2_scaffold_784_12
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10639..11172)
DNA (534bp) protein (178aa)
Sulfite oxidase n=1 Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2SJ90_9DELT
Molybdopterin-binding protein {ECO:0000313|EMBL:KFA91690.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" sour
molybdopterin-binding oxidoreductase
13_2_20cm_2_scaffold_784_13
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(11211..11927)
DNA (717bp) protein (239aa)
Uncharacterized protein n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MWF5_CORCM
Di-heme cytochrome, transmembrane
Di-heme cytochrome, transmembrane {ECO:0000313|EMBL:AHG87864.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_2_20cm_2_scaffold_784_14
unknown

Not on your lists

11949..12464
DNA (516bp) protein (172aa)

This feature has no annotations

13_2_20cm_2_scaffold_784_15
RBG_16_Deltaproteobacteria_71_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12470..13846
DNA (1377bp) protein (459aa)
5-methylthioadenosine/S-adenosylhomocysteine deaminase n=1 Tax=Kyrpidia tusciae (strain DSM 2912 / NBRC 15312 / T2) RepID=D5WQU8_KYRT2
amidohydrolase domain-containing protein Tax=RBG_16_Deltaproteobacteria_71_12_curated
amidohydrolase
13_2_20cm_2_scaffold_784_16
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

13855..14832
DNA (978bp) protein (326aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI000364E6A7
cytochrome c, class I Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
cytochrome c, class I
13_2_20cm_2_scaffold_784_17
Streptomyces griseus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14777..15802)
DNA (1026bp) protein (342aa)
Transcriptional regulator, LysR family n=2 Tax=Streptomyces griseus RepID=G0PTK8_STRGR
LysR family transcriptional regulator
Transcriptional regulator, LysR family {ECO:0000313|EMBL:EGE40990.1}; TaxID=649189 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces griseus
13_2_20cm_2_scaffold_784_18

Not on your lists

15892..16596
DNA (705bp) protein (235aa)
Excisionase/Xis, DNA-binding n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NUW0_9DELT
Transcriptional repressor of DCM dehalogenase {ECO:0000313|EMBL:AHN97947.1}; TaxID=1447241 species="Bacteria; environmental samples.;" source="uncultured bacterium lac160.;"
excisionase family DNA binding domain-containing protein
13_2_20cm_2_scaffold_784_19

Not on your lists

16714..17298
DNA (585bp) protein (195aa)
Candidate response regulator, NarL n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5XX74_RAMTT
Uncharacterized protein {ECO:0000313|EMBL:KKL16352.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
response regulator NarL
13_2_20cm_2_scaffold_784_20
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(17319..18941)
DNA (1623bp) protein (541aa)
Methyl-accepting chemotaxis protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3H1_GEMAT
methyl-accepting chemotaxis protein; K03406 methyl-accepting chemotaxis protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
methyl-accepting chemotaxis protein
13_2_20cm_2_scaffold_784_21
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(18997..21306)
DNA (2310bp) protein (770aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9E2_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
hypothetical protein
13_2_20cm_2_scaffold_784_22
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(21435..22649)
DNA (1215bp) protein (405aa)
Putative macrolide efflux ABC transporter permease n=3 Tax=Myxococcus RepID=F8CKF2_MYXFH id=5224471 bin=16ft_combo_ws3_JS1 species=unknown genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
putative macrolide efflux ABC transporter permease; K02004 putative ABC transport system permease protein Tax=RBG_16_RIF_WS3X_71_46_curated
putative macrolide efflux ABC transporter permease
13_2_20cm_2_scaffold_784_23
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(22652..24049)
DNA (1398bp) protein (466aa)
Macrolide-specific efflux protein MacA n=2 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=E3FQP0_STIAD id=5224472 bin=16ft_combo_ws3_JS1 species=Stigmatella aurantiaca genus=Stigmatella taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
macrolide-specific efflux protein maca; K02005 HlyD family secretion protein Tax=RBG_16_RIF_WS3X_71_46_curated
RND family efflux transporter MFP subunit
13_2_20cm_2_scaffold_784_24
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(24046..24639)
DNA (594bp) protein (198aa)
Macrolide-specific efflux protein MacA n=2 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=E3FQP0_STIAD id=5224472 bin=16ft_combo_ws3_JS1 species=Stigmatella aurantiaca genus=Stigmatella taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
macrolide-specific efflux protein maca; K02005 HlyD family secretion protein Tax=RBG_16_RIF_WS3X_71_46_curated
Displaying 24 items

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