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13_2_20cm_2_scaffold_8211

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_2_scaffold_8211_1
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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2..169
DNA (168bp) protein (56aa)
Thiol oxidoreductase-like protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q024U2_SOLUE
thiol oxidoreductase-like protein
Thiol oxidoreductase-like protein {ECO:0000313|EMBL:ABJ83484.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.
13_2_20cm_2_scaffold_8211_2
unknown

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comp(174..716)
DNA (543bp) protein (181aa)

This feature has no annotations

13_2_20cm_2_scaffold_8211_trna_2
unknown

Not on your lists

comp(879..952)
DNA (74bp)
transferRNA
13_2_20cm_2_scaffold_8211_3
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(1067..1708)
DNA (642bp) protein (214aa)
nucleoside-triphosphatase rdgB (EC:3.6.1.15); K02428 dITP/XTP pyrophosphatase [EC:3.6.1.19] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Non-canonical purine NTP pyrophosphatase n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6PPQ9_9FIRM
Nucleoside-triphosphatase rdgB
13_2_20cm_2_scaffold_8211_4
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(1705..2187)
DNA (483bp) protein (161aa)
Bifunctional protein HldE n=1 Tax=Thioflavicoccus mobilis 8321 RepID=L0GTQ0_9GAMM
bifunctional ADP-heptose synthase Tax=GWC2_Gemmatimonadetes_71_10_curated
D-heptose-7-phosphate 1-kinase,D-heptose-1-phosphate adenylyltransferase
13_2_20cm_2_scaffold_8211_5
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(2184..3317)
DNA (1134bp) protein (378aa)
Kef-type K+ transport system, membrane component n=2 Tax=Singulisphaera acidiphila RepID=L0D6D2_SINAD
Na+/H+ antiporter Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Kef-type K+ transport system membrane protein
13_2_20cm_2_scaffold_8211_6
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(3346..3702)
DNA (357bp) protein (119aa)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_2_20cm_2_scaffold_8211_7
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(3699..4235)
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8Q1_GEMAT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
Rare lipoprotein B
13_2_20cm_2_scaffold_8211_8
unknown

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4262..4381
DNA (120bp) protein (40aa)

This feature has no annotations

13_2_20cm_2_scaffold_8211_9
unknown

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4478..4609
DNA (132bp) protein (44aa)

This feature has no annotations

13_2_20cm_2_scaffold_8211_10
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(4918..5334)
DNA (417bp) protein (139aa)
hypothetical protein; K07107 acyl-CoA thioester hydrolase [EC:3.1.2.-] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Uncharacterized protein n=1 Tax=Brevibacillus borstelensis AK1 RepID=M8DA38_9BACL
hypothetical protein
13_2_20cm_2_scaffold_8211_11
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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5393..6130
DNA (738bp) protein (246aa)
lpxH; UDP-2,3-diacylglucosamine hydrolase (EC:3.6.1.-); K03269 UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Calcineurin-like phosphoesterase superfamily domain protein
Metallophosphoesterase id=4752057 bin=GWC2_Ignavibacteria_56_12 species=Sphingobacterium sp. genus=Sphingobacterium taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
13_2_20cm_2_scaffold_8211_12
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(6176..6976)
DNA (801bp) protein (267aa)
glutamate racemase; K01776 glutamate racemase [EC:5.1.1.3] Tax=GWC2_Gemmatimonadetes_71_10_curated
Glutamate racemase n=1 Tax=Pelobacter propionicus (strain DSM 2379) RepID=A1ANV7_PELPD rbh
Glutamate racemase
13_2_20cm_2_scaffold_8211_13
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(6973..7440)
DNA (468bp) protein (156aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_2_20cm_2_scaffold_8211_14
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(7491..9254)
DNA (1764bp) protein (588aa)
Diacylglycerol kinase catalytic region n=2 Tax=Chloroflexus RepID=A9WJK5_CHLAA
diacylglycerol kinase catalytic subunit; K07029 Tax=GWC2_Gemmatimonadetes_71_10_curated
diacylglycerol kinase catalytic subunit
13_2_20cm_2_scaffold_8211_15
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(9390..10439)
DNA (1050bp) protein (350aa)
Aspartate-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121}; Short=ASA dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121};; Short=ASADH {ECO:0000256|HAMAP-Rule:MF_02121};; EC=1.2.1.11 {ECO:000
aspartate semialdehyde dehydrogenase (EC:1.2.1.11)
Aspartate semialdehyde dehydrogenase n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LDF1_CHLTF
13_2_20cm_2_scaffold_8211_16
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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10853..11344
DNA (492bp) protein (164aa)
Homoserine kinase {ECO:0000256|HAMAP-Rule:MF_00384, ECO:0000256|SAAS:SAAS00080104}; Short=HK {ECO:0000256|HAMAP-Rule:MF_00384};; Short=HSK {ECO:0000256|HAMAP-Rule:MF_00384};; EC=2.7.1.39 {ECO:0000256|
homoserine kinase; K00872 homoserine kinase [EC:2.7.1.39] id=24406852 bin=RBG_19FT_COMBO_GAL15_69_19 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
Homoserine kinase
13_2_20cm_2_scaffold_8211_17
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

11348..12460
DNA (1113bp) protein (371aa)
aspartokinase/homoserine dehydrogenase (EC:1.1.1.3 2.7.2.4)
Aspartokinase/homoserine dehydrogenase {ECO:0000313|EMBL:BAH38409.1}; EC=1.1.1.3 {ECO:0000313|EMBL:BAH38409.1};; EC=2.7.2.4 {ECO:0000313|EMBL:BAH38409.1};; TaxID=379066 species="Bacteria; Gemmatimonad
Aspartokinase/homoserine dehydrogenase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A849_GEMAT
13_2_20cm_2_scaffold_8211_18
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

12469..14013
DNA (1545bp) protein (515aa)
Aspartokinase/homoserine dehydrogenase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A849_GEMAT
aspartate kinase
Aspartate kinase {ECO:0000313|EMBL:AHG89129.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_2_20cm_2_scaffold_8211_19
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria

Not on your lists

14434..14805
DNA (372bp) protein (124aa)
thrC; threonine synthase (EC:4.2.3.1)
Threonine synthase {ECO:0000313|EMBL:ACM05075.1}; EC=4.2.3.1 {ECO:0000313|EMBL:ACM05075.1};; TaxID=309801 species="Bacteria; Chloroflexi; Thermomicrobiales; Thermomicrobiaceae; Thermomicrobium.;" sour
Threonine synthase n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L1J2_THERP
13_2_20cm_2_scaffold_8211_20
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(14815..15165)
DNA (351bp) protein (117aa)
Tax=GWC2_Gemmatimonadetes_71_10_curated
13_2_20cm_2_scaffold_8211_21
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(15242..16303)
DNA (1062bp) protein (354aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_2_20cm_2_scaffold_8211_trna_1
unknown

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comp(16651..16740)
DNA (90bp)
transferRNA
13_2_20cm_2_scaffold_8211_22
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

16844..17245
DNA (402bp) protein (134aa)
PAS/PAC sensor hybrid histidine kinase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D4R9_9BACT
PAS/PAC sensor hybrid histidine kinase Tax=RBG_16_Gemmatimonadetes_66_8_curated
sensory box sensor histidine kinase/response regulator
13_2_20cm_2_scaffold_8211_23
unknown

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comp(17249..18775)
DNA (1527bp) protein (509aa)

This feature has no annotations

13_2_20cm_2_scaffold_8211_24
unknown

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comp(18772..20076)
DNA (1305bp) protein (435aa)

This feature has no annotations

13_2_20cm_2_scaffold_8211_25
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(20223..21662)
DNA (1440bp) protein (480aa)
Peptidase M20 n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02AW5_SOLUE
Peptidase M20 {ECO:0000313|EMBL:EYF06850.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apicu
hypothetical protein
13_2_20cm_2_scaffold_8211_26
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(21662..23344)
DNA (1683bp) protein (561aa)
fhs; formate--tetrahydrofolate ligase (EC:6.3.4.3); K01938 formate--tetrahydrofolate ligase [EC:6.3.4.3] Tax=RBG_16_Gemmatimonadetes_66_8_curated
fhs; formate--tetrahydrofolate ligase (EC:6.3.4.3)
Formate--tetrahydrofolate ligase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AE57_GEMAT
13_2_20cm_2_scaffold_8211_27
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(23357..24139)
DNA (783bp) protein (261aa)
putative DNase (EC:3.1.21.-); K03424 TatD DNase family protein [EC:3.1.21.-] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Putative DNase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8P4_GEMAT
hydrolase, TatD family
13_2_20cm_2_scaffold_8211_28
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(24152..24961)
DNA (810bp) protein (270aa)
Protein translocase subunit SecF n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=SECF_GEMAT
secF; protein-export membrane protein SecF; K03074 preprotein translocase subunit SecF Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
secF; protein-export membrane protein SecF
Displaying 30 items

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