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13_2_20cm_2_scaffold_8298

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_2_scaffold_8298_1
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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2..391
DNA (390bp) protein (130aa)
Glycine cleavage system H protein n=1 Tax=Patulibacter medicamentivorans RepID=H0E911_9ACTN
glycine cleavage system protein H; K02437 glycine cleavage system H protein Tax=RBG_16_Actinobacteria_68_12_curated
glycine cleavage system protein H
13_2_20cm_2_scaffold_8298_2
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

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407..1738
DNA (1332bp) protein (444aa)
glycine dehydrogenase subunit alpha (EC:1.4.4.2); K00282 glycine dehydrogenase subunit 1 [EC:1.4.4.2] Tax=RBG_16_Actinobacteria_67_10_curated
glycine dehydrogenase subunit alpha (EC:1.4.4.2)
Probable glycine dehydrogenase [decarboxylating] subunit 1 n=1 Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SL72_THEM7 rbh
13_2_20cm_2_scaffold_8298_3
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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1735..3231
DNA (1497bp) protein (499aa)
glycine dehydrogenase (EC:1.4.4.2)
Probable glycine dehydrogenase (decarboxylating) subunit 2 {ECO:0000256|HAMAP-Rule:MF_00713}; EC=1.4.4.2 {ECO:0000256|HAMAP-Rule:MF_00713};; Glycine cleavage system P-protein subunit 2 {ECO:0000256|HA
Probable glycine dehydrogenase (decarboxylating) subunit 2 n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F1K7_CONWI rbh
13_2_20cm_2_scaffold_8298_4
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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comp(3228..4208)
DNA (981bp) protein (327aa)
Probable dual-specificity RNA methyltransferase RlmN {ECO:0000256|HAMAP-Rule:MF_01849}; EC=2.1.1.192 {ECO:0000256|HAMAP-Rule:MF_01849};; 23S rRNA (adenine(2503)-C(2))-methyltransferase {ECO:0000256|HA
Probable dual-specificity RNA methyltransferase RlmN n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F1J9_CONWI
radical SAM enzyme, Cfr family
13_2_20cm_2_scaffold_8298_5
Amblyomma triste, Amblyomma, Ixodida, Acari, Arthropoda, Metazoa

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4272..5114
DNA (843bp) protein (281aa)
threonine aldolase (EC:4.1.2.5)
threonine aldolase n=2 Tax=Salinispora pacifica RepID=UPI0003826B57
Putative threonine aldolase {ECO:0000313|EMBL:JAC33687.1}; TaxID=251400 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Chelicerata; Arachnida; Acari; Parasitiformes; Ixodida; Ixodoidea; Ixodidae;
13_2_20cm_2_scaffold_8298_6
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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comp(5111..6160)
DNA (1050bp) protein (350aa)
hypothetical protein n=1 Tax=Alicyclobacillus pohliae RepID=UPI00037B6930
CaCA family calcium/proton antiporter; K07300 Ca2+:H+ antiporter Tax=RBG_16_Actinobacteria_68_12_curated
CaCA family calcium/proton antiporter
13_2_20cm_2_scaffold_8298_7
Tetrasphaera elongata, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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6178..6903
DNA (726bp) protein (242aa)
Putative (S)-2-haloacid dehalogenase n=1 Tax=Nitrospina gracilis 3/211 RepID=M1Z1I1_9BACT
Hydrolase {ECO:0000313|EMBL:CCH68741.1}; TaxID=1193181 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera elongata Lp2.;"
HAD family hydrolase
13_2_20cm_2_scaffold_8298_8
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

6960..7415
DNA (456bp) protein (152aa)
Tax=RBG_16_Actinobacteria_68_12_curated
13_2_20cm_2_scaffold_8298_9
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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comp(7471..8364)
DNA (894bp) protein (298aa)
apurinic endonuclease Apn1 (EC:3.1.21.2); K01151 deoxyribonuclease IV [EC:3.1.21.2] Tax=RBG_16_Actinobacteria_68_12_curated
apurinic endonuclease Apn1 (EC:3.1.21.2)
Probable endonuclease 4 n=1 Tax=Patulibacter medicamentivorans RepID=H0E227_9ACTN
13_2_20cm_2_scaffold_8298_10
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

8586..9869
DNA (1284bp) protein (428aa)
glutamyl-tRNA synthetase; K01885 glutamyl-tRNA synthetase [EC:6.1.1.17] Tax=RBG_16_Actinobacteria_68_12_curated
glutamyl-tRNA synthetase id=24476822 bin=RBG_19FT_COMBO_Aminicenantes_65_30 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=RBG_19FT_COMBO_Aminicenantes_65_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
glutamyl-tRNA synthetase
13_2_20cm_2_scaffold_8298_11
unknown

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comp(9996..10580)
DNA (585bp) protein (195aa)

This feature has no annotations

13_2_20cm_2_scaffold_8298_12
Myxococcus xanthus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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10724..11089
DNA (366bp) protein (122aa)
Response regulator n=2 Tax=Myxococcus xanthus RepID=Q1DF43_MYXXD
response regulator
Response regulator {ECO:0000313|EMBL:ABF89383.1}; TaxID=246197 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus x
13_2_20cm_2_scaffold_8298_13
Thermobaculum terrenum, Thermobaculum, Bacteria

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11103..12614
DNA (1512bp) protein (504aa)
Uncharacterized protein n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CF16_THET1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ41522.1}; TaxID=525904 species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798 / YNP1).;"
13_2_20cm_2_scaffold_8298_14
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(12611..13687)
DNA (1077bp) protein (359aa)
Uncharacterized protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FB09_CONWI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB53201.1}; Flags: Precursor;; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" sourc
13_2_20cm_2_scaffold_8298_trna_2
unknown

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comp(13975..14047)
DNA (73bp)
transferRNA
13_2_20cm_2_scaffold_8298_trna_1
unknown

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comp(14152..14222)
DNA (71bp)
transferRNA
13_2_20cm_2_scaffold_8298_15
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(14245..15123)
DNA (879bp) protein (293aa)
Metal dependent phosphohydrolase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F8X2_CONWI
metal dependent phosphohydrolase; K09163 hypothetical protein Tax=RBG_16_Actinobacteria_68_12_curated
metal dependent phosphohydrolase
13_2_20cm_2_scaffold_8298_16
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(15141..16946)
DNA (1806bp) protein (602aa)
ABC transporter related protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FBS5_CONWI
ABC transporter
ABC transporter related protein {ECO:0000313|EMBL:ADB51340.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexiba
13_2_20cm_2_scaffold_8298_17
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(17077..18006)
DNA (930bp) protein (310aa)
ABC transporter ATP-binding protein n=1 Tax=Patulibacter medicamentivorans RepID=H0E9F2_9ACTN
ABC transporter; K06147 ATP-binding cassette, subfamily B, bacterial Tax=RBG_16_Actinobacteria_68_12_curated
ABC transporter ATP-binding protein
13_2_20cm_2_scaffold_8298_18
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

Not on your lists

18029..18793
DNA (765bp) protein (255aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6LIL2_9FIRM
13_2_20cm_2_scaffold_8298_19
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(18758..19267)
DNA (510bp) protein (170aa)
Uracil-DNA glycosylase superfamily n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C5U1_SPHTD
uracil-DNA glycosylase superfamily
Uracil-DNA glycosylase superfamily {ECO:0000313|EMBL:ACZ39493.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobact
13_2_20cm_2_scaffold_8298_20
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(19278..19865)
DNA (588bp) protein (196aa)
hypothetical protein n=1 Tax=Streptomyces prunicolor RepID=UPI00035FCF83
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHH97889.1}; TaxID=1449976 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
13_2_20cm_2_scaffold_8298_21
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

19885..20334
DNA (450bp) protein (150aa)
putative glutamate formiminotransferase; K00603 glutamate formiminotransferase [EC:2.1.2.5] Tax=RBG_16_Actinobacteria_67_10_curated
Uncharacterized protein n=1 Tax=Thermoplasma volcanium (strain ATCC 51530 / DSM 4299 / JCM 9571 / NBRC 15438 / GSS1) RepID=Q97CL1_THEVO
glutamate formiminotransferase
Displaying 23 items

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