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13_2_20cm_2_scaffold_853

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_2_scaffold_853_1
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(1..1530)
DNA (1530bp) protein (510aa)
DNA mismatch repair protein MutS n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AEM6_GEMAT
mutS; DNA mismatch repair protein MutS; K03555 DNA mismatch repair protein MutS Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
DNA mismatch repair protein mutS
13_2_20cm_2_scaffold_853_2
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(1527..2387)
DNA (861bp) protein (287aa)
Sporulation domain-containing protein
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_2_20cm_2_scaffold_853_3
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(2384..3475)
DNA (1092bp) protein (364aa)
holA; putative DNA polymerase III delta subunit (EC:2.7.7.7); K02340 DNA polymerase III subunit delta [EC:2.7.7.7] Tax=RBG_16_Gemmatimonadetes_66_8_curated
holA; putative DNA polymerase III delta subunit (EC:2.7.7.7)
Putative DNA polymerase III delta subunit n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AEM8_GEMAT
13_2_20cm_2_scaffold_853_4
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(3565..4053)
DNA (489bp) protein (163aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_2_20cm_2_scaffold_853_5
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(4097..4741)
DNA (645bp) protein (215aa)
RNA polymerase sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AEN0_GEMAT
RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RBG_16_Gemmatimonadetes_66_8_curated
RNA polymerase sigma factor, sigma-70 family
13_2_20cm_2_scaffold_853_6
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(4943..5482)
DNA (540bp) protein (180aa)
putative ADP-ribose pyrophosphatase (EC:3.6.1.13); K01515 ADP-ribose pyrophosphatase [EC:3.6.1.13] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Putative ADP-ribose pyrophosphatase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AEN1_GEMAT
NUDIX hydrolase
13_2_20cm_2_scaffold_853_7
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(5492..6094)
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C3Q1_SPHTD
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
hypothetical protein
13_2_20cm_2_scaffold_853_8
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(6128..8794)
DNA (2667bp) protein (889aa)
membrane associated hydrolase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
hypothetical protein
membrane associated hydrolase id=24498641 bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
13_2_20cm_2_scaffold_853_9
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(8877..9659)
DNA (783bp) protein (261aa)
UPI0003D7A767 related cluster n=3 Tax=Aminicenantes RepID=UPI0003D7A767
PBS lyase HEAT domain protein repeat-containing protein
PBS lyase HEAT domain protein repeat-containing protein {ECO:0000313|EMBL:AHG87842.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_2_20cm_2_scaffold_853_10
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(9656..11185)
DNA (1530bp) protein (510aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABI2_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_2_20cm_2_scaffold_853_11
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(11185..11853)
DNA (669bp) protein (223aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABI3_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_2_20cm_2_scaffold_853_12
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(11850..12392)
DNA (543bp) protein (181aa)
RNA polymerase ECF-type sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABI4_GEMAT
RNA polymerase ECF-type sigma factor Tax=RBG_16_Gemmatimonadetes_66_8_curated
RNA polymerase sigma factor, sigma-70 family
13_2_20cm_2_scaffold_853_13
unknown

Not on your lists

comp(12504..12923)
DNA (420bp) protein (140aa)

This feature has no annotations

13_2_20cm_2_scaffold_853_14
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(12920..13543)
DNA (624bp) protein (208aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q021K4_SOLUE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ84385.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatu
13_2_20cm_2_scaffold_853_15
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(13617..14261)
DNA (645bp) protein (215aa)
upp; uracil phosphoribosyltransferase (EC:2.4.2.9); K00761 uracil phosphoribosyltransferase [EC:2.4.2.9] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Uracil phosphoribosyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AEP3_GEMAT
Uracil phosphoribosyl transferase
13_2_20cm_2_scaffold_853_trna_1
unknown

Not on your lists

14956..15028
DNA (73bp)
transferRNA
13_2_20cm_2_scaffold_853_16
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

15588..16235
DNA (648bp) protein (216aa)
Periplasmic protein involved in polysaccharide export n=1 Tax=Chamaesiphon minutus PCC 6605 RepID=K9UGC2_9CHRO
Periplasmic polysaccharide export protein Tax=GWC2_Gemmatimonadetes_71_10_curated
polysaccharide export protein
13_2_20cm_2_scaffold_853_17
Nitrosococcus watsonii, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16272..17051)
DNA (780bp) protein (260aa)
Putative uncharacterized protein n=1 Tax=Nitrosococcus watsoni (strain C-113) RepID=D8KBE6_NITWC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADJ29593.1}; TaxID=105559 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus watsoni
13_2_20cm_2_scaffold_853_18
Nitrosococcus watsonii, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17048..18661)
DNA (1614bp) protein (538aa)
Putative uncharacterized protein n=1 Tax=Nitrosococcus watsoni (strain C-113) RepID=D8KBE7_NITWC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADJ29594.1}; TaxID=105559 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus watsoni
13_2_20cm_2_scaffold_853_19
Nostoc punctiforme, Nostoc, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(18666..19829)
DNA (1164bp) protein (388aa)
Glycosyl transferase, group 1 n=1 Tax=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) RepID=B2IYJ8_NOSP7 rbh
group 1 glycosyl transferase
Glycosyl transferase, group 1 {ECO:0000313|EMBL:ACC80085.1}; TaxID=63737 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Nostoc.;" source="Nostoc punctiforme (strain ATCC 29133 / PCC 73102)
13_2_20cm_2_scaffold_853_20
Ruminiclostridium thermocellum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19832..21436)
DNA (1605bp) protein (535aa)
LmbE family protein n=1 Tax=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) RepID=A3DHJ6_CLOTH
LmbE-like protein
LmbE family protein {ECO:0000313|EMBL:ABN53425.1}; TaxID=203119 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium thermocellum (strain
13_2_20cm_2_scaffold_853_21
Nitrosococcus watsonii, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21482..22744)
DNA (1263bp) protein (421aa)
Putative uncharacterized protein n=1 Tax=Nitrosococcus watsoni (strain C-113) RepID=D8KBE7_NITWC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADJ29594.1}; TaxID=105559 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus watsoni
13_2_20cm_2_scaffold_853_22
Truepera radiovictrix, Truepera, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(22756..24042)
DNA (1287bp) protein (429aa)
O-antigen polymerase n=1 Tax=Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 / RQ-24) RepID=D7CTL6_TRURR
O-antigen polymerase
O-antigen polymerase {ECO:0000313|EMBL:ADI13873.1}; Flags: Precursor;; TaxID=649638 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Trueperaceae; Truepera.;" source="Truepera radiov
13_2_20cm_2_scaffold_853_23
Peptococcaceae bacterium BRH_c8a, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24150..25379)
DNA (1230bp) protein (410aa)
Polysaccharide biosynthesis protein n=1 Tax=planctomycete KSU-1 RepID=I3IJY2_9PLAN
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:KJS11981.1}; TaxID=1629715 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae.;" source="Peptococcaceae bacterium BRH_c8a.;"
polysaccharide biosynthesis protein
13_2_20cm_2_scaffold_853_24
GWD2_Desulfuromonadales_61_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25643..28033)
DNA (2391bp) protein (797aa)
non-specific protein-tyrosine kinase (EC:2.7.10.2); K08253 non-specific protein-tyrosine kinase [EC:2.7.10.2] Tax=GWD2_Desulfuromonadales_61_12_curated
Capsular exopolysaccharide family n=1 Tax=Thioalkalivibrio thiocyanoxidans ARh 4 RepID=G4DLL7_9GAMM
hypothetical protein
13_2_20cm_2_scaffold_853_25
Nitrosococcus watsonii, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28418..30325)
DNA (1908bp) protein (636aa)
Metallophosphoesterase n=1 Tax=Nitrosococcus watsoni (strain C-113) RepID=D8KBF9_NITWC
metallophosphoesterase
Metallophosphoesterase {ECO:0000313|EMBL:ADJ29606.1}; TaxID=105559 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus watsoni (
Displaying 26 items

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