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13_2_20cm_2_scaffold_97

Search features with annotation key words

Displaying items 1-30 of 109 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_2_scaffold_97_1
unknown

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2..133
DNA (132bp) protein (44aa)

This feature has no annotations

13_2_20cm_2_scaffold_97_2
Thermococcus paralvinellae, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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comp(178..834)
DNA (657bp) protein (219aa)
Ribonuclease HII {ECO:0000256|HAMAP-Rule:MF_00052}; Short=RNase HII {ECO:0000256|HAMAP-Rule:MF_00052};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00052};; TaxID=582419 species="Archaea; Euryarchaeota; Th
Ribonuclease HII n=1 Tax=Thermococcus sibiricus (strain MM 739 / DSM 12597) RepID=RNH2_THESM
ribonuclease HII
13_2_20cm_2_scaffold_97_3
Thermofilum pendens, Thermofilum, Thermoproteales, Thermoprotei, Crenarchaeota, Archaea

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comp(831..1373)
DNA (543bp) protein (181aa)
Nucleoside-triphosphatase THEP1 {ECO:0000255|HAMAP-Rule:MF_00796}; Short=NTPase THEP1 {ECO:0000255|HAMAP-Rule:MF_00796};; EC=3.6.1.15 {ECO:0000255|HAMAP-Rule:MF_00796};; Nucleoside triphosphate phosph
Nucleoside-triphosphatase THEP1 n=1 Tax=Thermofilum pendens (strain Hrk 5) RepID=NTPTH_THEPD
putative NTPase
13_2_20cm_2_scaffold_97_4
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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comp(1382..2023)
DNA (642bp) protein (214aa)
ribosomal RNA methyltransferase RrmJ/FtsJ; K02427 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166] Tax=RBG_13_Bathyarchaeota_38_9_curated
Ribosomal RNA large subunit methyltransferase E n=1 Tax=Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H) RepID=RLME_METTH
cell division protein J
13_2_20cm_2_scaffold_97_5
R_OP11_Roizmanbacteria_39_9, Roizmannbacteria, Microgenomates, Bacteria

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comp(2039..2380)
DNA (342bp) protein (114aa)
Methionine--tRNA ligase n=1 Tax=Thermanaerovibrio acidaminovorans (strain ATCC 49978 / DSM 6589 / Su883) RepID=D1B5Y7_THEAS
methionyl-tRNA synthetase; K06878 tRNA-binding protein Tax=RIFCSPHIGHO2_02_FULL_OP11_Roizmanbacteria_39_9_curated
methionyl-tRNA synthetase
13_2_20cm_2_scaffold_97_6
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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comp(2423..3697)
DNA (1275bp) protein (425aa)
peptidase M16 domain-containing protein; K07263 zinc protease [EC:3.4.24.-] Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
Peptidase M16 domain protein n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UVJ9_ROSS1
peptidase M16 domain-containing protein
13_2_20cm_2_scaffold_97_7
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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comp(3687..5000)
DNA (1314bp) protein (438aa)
peptidase M16 domain-containing protein; K07263 zinc protease [EC:3.4.24.-] Tax=RBG_16_Euryarchaeota_67_27_curated
Peptidase M16 domain protein n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9B202_HERA2
peptidase M16 domain-containing protein
13_2_20cm_2_scaffold_97_8
uncultured marine crenarchaeote E48-1C, Crenarchaeota, Archaea

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comp(5030..5632)
DNA (603bp) protein (201aa)
Orotate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01208}; Short=OPRT {ECO:0000256|HAMAP-Rule:MF_01208};; Short=OPRTase {ECO:0000256|HAMAP-Rule:MF_01208};; EC=2.4.2.10 {ECO:0000256|HAMAP-Rul
pyrE; orotate phosphoribosyltransferase (EC:2.4.2.10)
Orotate phosphoribosyltransferase n=1 Tax=uncultured marine crenarchaeote E48-1C RepID=G9BAV0_9CREN
13_2_20cm_2_scaffold_97_9
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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5749..6960
DNA (1212bp) protein (404aa)
DUF2088 domain protein n=1 Tax=uncultured marine crenarchaeote E48-1C RepID=G9BAU8_9CREN
hypothetical protein Tax=RBG_13_Bathyarchaeota_46_16b_curated
hypothetical protein
13_2_20cm_2_scaffold_97_10
RBG_16_Archaea_50_20_curated, Archaea

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7006..9018
DNA (2013bp) protein (671aa)
Tax=RBG_16_Archaea_50_20_curated
13_2_20cm_2_scaffold_97_11
RBG_16_Archaea_50_20_curated, Archaea

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comp(9376..10140)
DNA (765bp) protein (255aa)
Coenzyme F420-0 gamma-glutamyl ligase n=1 Tax=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) RepID=A3CWL2_METMJ
F420-dependent oxidoreductase Tax=RBG_16_Archaea_50_20_curated
coenzyme F420-0 gamma-glutamyl ligase
13_2_20cm_2_scaffold_97_12
RBG_16_Archaea_50_20_curated, Archaea

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comp(10148..11695)
DNA (1548bp) protein (516aa)
histidine ammonia-lyase; K01745 histidine ammonia-lyase [EC:4.3.1.3] Tax=RBG_16_Archaea_50_20_curated
histidine ammonia-lyase (EC:4.3.1.3)
Histidine ammonia-lyase n=1 Tax=Petrotoga mobilis (strain DSM 10674 / SJ95) RepID=A9BJ38_PETMO
13_2_20cm_2_scaffold_97_13
RBG_16_Archaea_50_20_curated, Archaea

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comp(11748..13322)
DNA (1575bp) protein (525aa)
urocanate hydratase (EC:4.2.1.49); K01712 urocanate hydratase [EC:4.2.1.49] Tax=RBG_16_Archaea_50_20_curated
urocanate hydratase (EC:4.2.1.49)
Urocanate hydratase n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=HUTU_SYMTH
13_2_20cm_2_scaffold_97_14
BJP_IG2069_Desfulfarculales_53_13, Desulfarculales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(13436..14356)
DNA (921bp) protein (307aa)
Probable imidazolonepropionase n=1 Tax=Thermoplasmatales archaeon SCGC AB-540-F20 RepID=M7T822_9EURY
imidazolonepropionase
Tax=BJP_IG2069_Desfulfarculales_53_13
13_2_20cm_2_scaffold_97_15
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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comp(14726..15754)
DNA (1029bp) protein (343aa)
Uncharacterized protein n=1 Tax=Thermococcus sp. (strain CGMCC 1.5172 / 4557) RepID=G0HNS5_THES4
hypothetical protein Tax=RBG_16_Euryarchaeota_68_13_curated
hypothetical protein
13_2_20cm_2_scaffold_97_16
Bacillus thuringiensis, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(16028..17197)
DNA (1170bp) protein (390aa)
Nitroreductase n=2 Tax=Bacillus thuringiensis RepID=C3FDK2_BACTU
Nitroreductase {ECO:0000313|EMBL:EEM86226.1}; TaxID=527028 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source="Bacillus thuringiensis serovar pu
noxC; NADH oxidase
13_2_20cm_2_scaffold_97_17
unknown

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17471..17605
DNA (135bp) protein (45aa)

This feature has no annotations

13_2_20cm_2_scaffold_97_18

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comp(17632..18099)
DNA (468bp) protein (156aa)
Marine sediment metagenome DNA, contig: S06H3_C01604 {ECO:0000313|EMBL:GAH98155.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
13_2_20cm_2_scaffold_97_19
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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comp(18649..19959)
DNA (1311bp) protein (437aa)
Pre-mRNA processing ribonucleoprotein, binding domain protein n=1 Tax=Staphylothermus hellenicus (strain DSM 12710 / JCM 10830 / BK20S6-10-b1 / P8) RepID=D7D951_STAHD rbh
rRNA biogenesis protein Nop56/Nop58; K14564 nucleolar protein 56 Tax=RBG_13_Bathyarchaeota_38_9_curated
Pre-mRNA processing ribonucleoprotein, binding domain-containing protein
13_2_20cm_2_scaffold_97_20
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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20145..20984
DNA (840bp) protein (280aa)
dihydroorotate dehydrogenase family protein (EC:1.3.3.1); K00226 dihydroorotate dehydrogenase (fumarate) [EC:1.3.98.1] Tax=RBG_13_Bathyarchaeota_38_9_curated
pyrD; dihydroorotate oxidase B, catalytic subunit (EC:1.3.98.1)
Dihydroorotate dehydrogenase n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8I5V0_METCZ
13_2_20cm_2_scaffold_97_21
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria

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comp(21189..21482)
DNA (294bp) protein (98aa)
GAF domain protein n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L0G4_THERP
GAF domain-containing protein
GAF domain protein {ECO:0000313|EMBL:ACM05437.1}; TaxID=309801 species="Bacteria; Chloroflexi; Thermomicrobiales; Thermomicrobiaceae; Thermomicrobium.;" source="Thermomicrobium roseum (strain ATCC 275
13_2_20cm_2_scaffold_97_22
RBG_16_Archaea_50_20_curated, Archaea

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21551..23272
DNA (1722bp) protein (574aa)
hypothetical protein n=1 Tax=Sulfobacillus thermosulfidooxidans RepID=UPI00031E1BA7
hypothetical protein; K06888 Tax=RBG_16_Archaea_50_20_curated
hypothetical protein
13_2_20cm_2_scaffold_97_23
Symbiobacterium thermophilum, Symbiobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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23466..24926
DNA (1461bp) protein (487aa)
Putative uncharacterized protein n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Q67Q21_SYMTH
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAD40222.1}; TaxID=292459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Symbiobacteriaceae; Symbiobacterium.;" source="Symbiobacterium th
13_2_20cm_2_scaffold_97_24
RBG_16_Archaea_50_20_curated, Archaea

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comp(24923..26383)
DNA (1461bp) protein (487aa)
inosine-5'-monophosphate dehydrogenase (EC:1.1.1.205); K00088 IMP dehydrogenase [EC:1.1.1.205] Tax=RBG_16_Archaea_50_20_curated
inosine-5'-monophosphate dehydrogenase (EC:1.1.1.205)
hypothetical protein n=1 Tax=candidate division YNPFFA RepID=UPI000372A517
13_2_20cm_2_scaffold_97_25
Methanocaldococcus infernus, Methanocaldococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

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26680..27855
DNA (1176bp) protein (392aa)
adenosylhomocysteinase (EC:3.3.1.1)
Adenosylhomocysteinase {ECO:0000256|HAMAP-Rule:MF_00563, ECO:0000256|RuleBase:RU000548}; EC=3.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00563, ECO:0000256|RuleBase:RU000548};; S-adenosyl-L-homocysteine hydrola
Adenosylhomocysteinase n=1 Tax=Methanocaldococcus infernus (strain DSM 11812 / JCM 15783 / ME) RepID=D5VRX5_METIM
13_2_20cm_2_scaffold_97_26
RBG_16_Archaea_50_20_curated, Archaea

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28076..28903
DNA (828bp) protein (276aa)
Binding-protein-dependent transport system inner membrane protein n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S8N0_9SPHN
ssuC1; aliphatic sulfonates ABC transporter permease SsuC Tax=RBG_16_Archaea_50_20_curated
binding-protein-dependent transport system inner membrane protein
13_2_20cm_2_scaffold_97_27
RBG_16_Archaea_50_20_curated, Archaea

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28913..29725
DNA (813bp) protein (271aa)
ABC transporter related n=1 Tax=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) RepID=B8GH16_METPE
taurine-transporting AtPase; K02049 NitT/TauT family transport system ATP-binding protein Tax=RBG_16_Archaea_50_20_curated
ABC transporter
13_2_20cm_2_scaffold_97_28
unknown

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29732..30304
DNA (573bp) protein (191aa)

This feature has no annotations

13_2_20cm_2_scaffold_97_29
RBG_16_Chloroflexi_54_18_curated, Chloroflexi, Bacteria

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comp(30230..31978)
DNA (1749bp) protein (583aa)
peptidase M6, immune inhibitor A; K09607 immune inhibitor A [EC:3.4.24.-] Tax=RBG_16_Chloroflexi_54_18_curated
protease id=24427591 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Streptomyces avermitilis genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
13_2_20cm_2_scaffold_97_30
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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32127..33803
DNA (1677bp) protein (559aa)
UPF0219 protein Mfer_0083 n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GWZ8_METFV
hydroxymethylglutaryl-CoA synthase Tax=RBG_13_Bathyarchaeota_38_9_curated
hydroxymethylglutaryl-CoA synthase
Displaying items 1-30 of 109 in total

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