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13_2_20cm_2_scaffold_1731_17

Organism: 13_2_20cm_2_UNK

megabin RP 54 / 55 MC: 54 BSCG 51 / 51 MC: 51 ASCG 38 / 38 MC: 38
Location: comp(10491..11090)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CWR9_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 59.8
  • Coverage: 199.0
  • Bit_score: 222
  • Evalue 3.10e-55
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.8
  • Coverage: 199.0
  • Bit_score: 222
  • Evalue 4.40e-55
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 51.9
  • Coverage: 189.0
  • Bit_score: 183
  • Evalue 4.60e-44

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Taxonomy

Chthoniobacter flavus → Chthoniobacter → Spartobacteria → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 600
ATGGCCGATCCCGAAGTAGCGGCGCGATCCGAGGATGACGCCGAGGACGTCCGCCTGATGCGATTGGTTTCAGGCGGGGATGCTACCGCGCTTGAACAACTGGTCGAGCGCCACCAGGCCCTAGTTGCCGGCACCGTCGCCCGCATGCTCGGTAGCAATTCGGACGTGGAAGACATCGCCCAGCAGGTCTTCATCCGTGTCTGGAAAAGCGCCGGGCGGTACGTCGCGCGCGCGAAGTTCACCACTTGGCTGCTGAAGATCACGCGCAATCTAGTGTTTAACGAAATGCGCCGGGCCAAGCGTCATCCGCATCTGCCGGTGCAAATCGAACCAGAAGCGGACGAGATACCGTTAAAGGACGAGGCAACGGCCACCCCCGACGCAACGCTGCTTCAAGCCGAATTACAGGCCGCGATTGAAAAAGCCATCACGCTCCTTCCGGAAACGCAGCGCATGGCGATCGTGCTACGACGATACGAAGAGTTGAGCTATGAAGAAATTGCGGACGTTCTCGATCTGTCCGTGCCGGCAGTAAAGAGTCTGCTCTTTCGCGCGCGAACGGAATTGCGCGCGCGTTTAAAGGATTACCTAGGGCGATAA
PROTEIN sequence
Length: 200
MADPEVAARSEDDAEDVRLMRLVSGGDATALEQLVERHQALVAGTVARMLGSNSDVEDIAQQVFIRVWKSAGRYVARAKFTTWLLKITRNLVFNEMRRAKRHPHLPVQIEPEADEIPLKDEATATPDATLLQAELQAAIEKAITLLPETQRMAIVLRRYEELSYEEIADVLDLSVPAVKSLLFRARTELRARLKDYLGR*