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13_2_20cm_2_scaffold_1731

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_2_scaffold_1731_1
Fervidobacterium pennivorans, Fervidobacterium, Thermotogales, Thermotogae, Thermotogae, Bacteria

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2..274
DNA (273bp) protein (91aa)
50S ribosomal protein L18 n=1 Tax=Fervidobacterium pennivorans (strain DSM 9078 / Ven5) RepID=H9UD81_FERPD
50S ribosomal protein L18
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=771875 species="Bacteria; Thermotogae; Thermotogales; Fervidobacteriaceae; Fervidobacterium.;" source="Fervidobacterium pennivorans (
13_2_20cm_2_scaffold_1731_2
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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279..851
DNA (573bp) protein (191aa)
30S ribosomal protein S5 n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CUZ0_9BACT
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter fla
30S ribosomal protein S5
13_2_20cm_2_scaffold_1731_3
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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848..1426
DNA (579bp) protein (193aa)
50S ribosomal protein L15 n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CUZ1_9BACT
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341, ECO:0000256|RuleBase:RU003889}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter fl
rplO; 50S ribosomal protein L15
13_2_20cm_2_scaffold_1731_4
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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1446..2951
DNA (1506bp) protein (502aa)
Protein translocase subunit SecY n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CUZ2_9BACT
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus
secY; preprotein translocase subunit SecY
13_2_20cm_2_scaffold_1731_5
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3008..3607
DNA (600bp) protein (200aa)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU0033
adk; adenylate kinase (EC:2.7.4.3)
Adenylate kinase n=1 Tax=Clostridium sp. CAG:62 RepID=R7CDE6_9CLOT
13_2_20cm_2_scaffold_1731_6
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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3604..4380
DNA (777bp) protein (259aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974
Methionine aminopeptidase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CUZ3_9BACT rbh
map; methionine aminopeptidase
13_2_20cm_2_scaffold_1731_7
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

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4353..4586
DNA (234bp) protein (78aa)
50S ribosomal protein L36 n=1 Tax=Nitratifractor salsuginis (strain DSM 16511 / JCM 12458 / E9I37-1) RepID=E6WYM1_NITSE
50S ribosomal protein L36; K02919 large subunit ribosomal protein L36 Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
50S ribosomal protein L36
13_2_20cm_2_scaffold_1731_8
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

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4607..5002
DNA (396bp) protein (132aa)
30S ribosomal protein S13 n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CUZ5_9BACT
rpsM; 30S ribosomal protein S13; K02952 small subunit ribosomal protein S13 Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
rpsM; 30S ribosomal protein S13
13_2_20cm_2_scaffold_1731_9
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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5008..5631
DNA (624bp) protein (208aa)
30S ribosomal protein S11 n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CUZ6_9BACT
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
30S ribosomal protein S11
13_2_20cm_2_scaffold_1731_10
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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5637..6248
DNA (612bp) protein (204aa)
30S ribosomal protein S4 n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CUZ7_9BACT
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
30S ribosomal protein S4
13_2_20cm_2_scaffold_1731_11
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(6258..6533)
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D097_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY20411.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
13_2_20cm_2_scaffold_1731_12
Hydrogenivirga sp. 128-5-R1-1, Hydrogenivirga, Aquificales, Aquificae, Aquificae, Bacteria

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6655..7047
DNA (393bp) protein (131aa)
hypothetical protein n=1 Tax=Verrucomicrobium spinosum RepID=UPI000174506F
Chemotaxis protein CheY {ECO:0000313|EMBL:EDP75522.1}; TaxID=392423 species="Bacteria; Aquificae; Aquificales; Aquificaceae; Hydrogenivirga.;" source="Hydrogenivirga sp. 128-5-R1-1.;"
13_2_20cm_2_scaffold_1731_13
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(7090..7410)
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D098_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY20412.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
13_2_20cm_2_scaffold_1731_14
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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7516..7932
DNA (417bp) protein (139aa)
hypothetical protein id=14625221 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
hypothetical protein Tax=CSP1_6_Rokubacteria
hypothetical protein
13_2_20cm_2_scaffold_1731_15
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

7941..8606
DNA (666bp) protein (222aa)
N-(5'-phosphoribosyl)anthranilate isomerase {ECO:0000256|HAMAP-Rule:MF_00135, ECO:0000256|SAAS:SAAS00123216}; Short=PRAI {ECO:0000256|HAMAP-Rule:MF_00135};; EC=5.3.1.24 {ECO:0000256|HAMAP-Rule:MF_0013
N-(5'-phosphoribosyl)anthranilate isomerase (EC:5.3.1.24)
N-(5'-phosphoribosyl)anthranilate isomerase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D9V7_9BACT
13_2_20cm_2_scaffold_1731_16
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

8714..10429
DNA (1716bp) protein (572aa)
Type II and III secretion system protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D9V8_9BACT
Type II and III secretion system protein {ECO:0000313|EMBL:EDY16772.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter fla
pilQ; type IV pilus biogenesis protein PilQ
13_2_20cm_2_scaffold_1731_17
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(10491..11090)
DNA (600bp) protein (200aa)
RNA polymerase sigma factor n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CWR9_9BACT
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
ECF subfamily RNA polymerase sigma-24 subunit
13_2_20cm_2_scaffold_1731_18
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

11243..12394
DNA (1152bp) protein (384aa)
Radical SAM domain protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CWR8_9BACT
Radical SAM domain protein {ECO:0000313|EMBL:EDY21860.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
thiH; thiamine biosynthesis enzyme ThiH or related uncharacterized enzyme
13_2_20cm_2_scaffold_1731_19
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

12398..13171
DNA (774bp) protein (258aa)
Chorismate dehydratase {ECO:0000256|HAMAP-Rule:MF_00995}; EC=4.2.1.151 {ECO:0000256|HAMAP-Rule:MF_00995};; Menaquinone biosynthetic enzyme MqnA {ECO:0000256|HAMAP-Rule:MF_00995}; TaxID=497964 species=
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CWR7_9BACT
hypothetical protein
13_2_20cm_2_scaffold_1731_20
unknown

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comp(13185..13571)
DNA (387bp) protein (129aa)

This feature has no annotations

13_2_20cm_2_scaffold_1731_21
Akkermansia sp. CAG:344, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

13784..15385
DNA (1602bp) protein (534aa)
hypothetical protein n=1 Tax=Rubritalea marina RepID=UPI0003791061 rbh
Single-stranded-DNA-specific exonuclease RecJ {ECO:0000313|EMBL:CDD98004.1}; TaxID=1262691 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; envir
single-stranded-DNA-specific exonuclease RecJ
13_2_20cm_2_scaffold_1731_22
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

15385..17442
DNA (2058bp) protein (686aa)
ATP-dependent DNA helicase RecG n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D2B7_9BACT
ATP-dependent DNA helicase RecG {ECO:0000313|EMBL:EDY19357.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
DEAD/DEAH box helicase
13_2_20cm_2_scaffold_1731_23
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

17443..18048
DNA (606bp) protein (202aa)
2-alkenal reductase {ECO:0000313|EMBL:EDY19358.1}; EC=1.3.1.74 {ECO:0000313|EMBL:EDY19358.1};; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter
2-alkenal reductase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D2B8_9BACT
protease Do
13_2_20cm_2_scaffold_1731_24
RBG_13_Nitrospirae_43_8_curated, Nitrospirae, Bacteria

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18011..18856
DNA (846bp) protein (282aa)
MucD Tax=RBG_13_Nitrospirae_43_8_curated
MucD id=2226447 bin=GWB2_Nitrospirae_rel_47_37 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
serine protease MucD
13_2_20cm_2_scaffold_1731_25
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

18966..19367
DNA (402bp) protein (134aa)
hypothetical protein n=1 Tax=Verrucomicrobium spinosum RepID=UPI00017450DD
Membrane protein involved in colicin uptake-like protein {ECO:0000313|EMBL:EDY17454.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Ch
hypothetical protein
Displaying 25 items

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