ggKbase home page

13_2_20cm_2_scaffold_3670_2

Organism: 13_2_20cm_2_UNK

megabin RP 54 / 55 MC: 54 BSCG 51 / 51 MC: 51 ASCG 38 / 38 MC: 38
Location: 436..1488

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8U9_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 58.3
  • Coverage: 355.0
  • Bit_score: 393
  • Evalue 2.40e-106
rpoN; RNA polymerase sigma factor; K03092 RNA polymerase sigma-54 factor Tax=RBG_16_Acidobacteria_68_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 70.3
  • Coverage: 344.0
  • Bit_score: 492
  • Evalue 4.00e-136
RNA polymerase sigma-54 factor, RpoN similarity KEGG
DB: KEGG
  • Identity: 61.0
  • Coverage: 349.0
  • Bit_score: 418
  • Evalue 1.90e-114

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_Acidobacteria_68_9_curated → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 1053
ATGAAGACCGGCCTGCAGCAGCACGCGGCGCTGTCGCAGCAGCTGCGGATCAATCCGCGCCTGTACCAGGCGATGGACCTGCTGTACATGCCGCTGCTCGATCTCCAGCAGCACCTCAAGCAGGAGCTGCTCGGCAATCCGTTCCTCGAGCTCGTCGAGCCTGAGGAGGAGACGGAAGTGCCGTTGGCGGAGGAGGCCAAGGAGGACAAGAAGGAGGCCGAGAAGAACGACGAACCCAACTGGGAGGAGATCCTCCTGGACGACGGCGGCGATCAGGGCGCCCCGCCCCGGGACATGAGCGAAGCGCGCGAGTACGTCGAGCCGGTGCCGGTCGAGACCAAGGACCTGACCGATCACCTGCGTGAGCAGATGCGGCTGCTCGACCTCACGCCCCGCCAGCAGCTGCTCGCGGAAGAGTTCATCGGAAACATCGCGGAAGACGGGTATCTCGGCGCGACGCTCGAGGAGATCGTGAACGGCGTGAACCAGGTGCTCCAGGCCCACGCCGACGCATCGGAGCTCGACGTCGCTCCGCAGCCGTACACGCTGGCCGAGGCGGAGGAGATGCTCCGCGTCATCCAGAAGCTCGACCCCCCTGGGGTCGGCGCGCGGGACCTGCGCGAGTGTCTCCTGCTGCAGCTCGACGCGCGAGGCGAAACGGACACGCTCGCCTACCGCCTGGTCCGGGATGCGTTCGACGATCTCAAGGCACATCGCTGGAGCGATCTCGGCAAGCGCTTCGGTCTCGACGCGGCCGAGGTGCAGAACGTGGCCGACGAGCTCGCCAAGCTCGATCCCAAGCCCGGCCTGCAGCACTCGTCCGCCAACGAGGCGTACATCATTCCCGACCTGGTCGTGGAGAAGATCGGCGGAGAATACAAGGTCTTCCTGAACGACTCCGGGCTGCCGCGGCTGCGGATCTCCAAGACCTACCAGGACATTGCGCGCGACAAGAAGAAATTCCAGGGCGAGAACAAGGACTTCATCAACCAGCGCATGAACAGCGCGCACTGGATGATCCAGACGTCATCAACATGCACGAGAGCACCGTGA
PROTEIN sequence
Length: 351
MKTGLQQHAALSQQLRINPRLYQAMDLLYMPLLDLQQHLKQELLGNPFLELVEPEEETEVPLAEEAKEDKKEAEKNDEPNWEEILLDDGGDQGAPPRDMSEAREYVEPVPVETKDLTDHLREQMRLLDLTPRQQLLAEEFIGNIAEDGYLGATLEEIVNGVNQVLQAHADASELDVAPQPYTLAEAEEMLRVIQKLDPPGVGARDLRECLLLQLDARGETDTLAYRLVRDAFDDLKAHRWSDLGKRFGLDAAEVQNVADELAKLDPKPGLQHSSANEAYIIPDLVVEKIGGEYKVFLNDSGLPRLRISKTYQDIARDKKKFQGENKDFINQRMNSAHWMIQTSSTCTRAP*