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13_2_20cm_2_scaffold_3670

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_2_scaffold_3670_1
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

2..439
DNA (438bp) protein (146aa)
putative ABC transporter ATP-binding protein; K06861 lipopolysaccharide export system ATP-binding protein [EC:3.6.3.-] Tax=GWC2_Gemmatimonadetes_71_10_curated
Putative ABC transporter ATP-binding protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8V0_GEMAT
putative ABC transporter ATP-binding protein
13_2_20cm_2_scaffold_3670_2
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

Not on your lists

436..1488
DNA (1053bp) protein (351aa)
RNA polymerase sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8U9_GEMAT
rpoN; RNA polymerase sigma factor; K03092 RNA polymerase sigma-54 factor Tax=RBG_16_Acidobacteria_68_9_curated
RNA polymerase sigma-54 factor, RpoN
13_2_20cm_2_scaffold_3670_3
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

Not on your lists

1470..1775
DNA (306bp) protein (102aa)
RNA polymerase sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8U9_GEMAT
rpoN; RNA polymerase sigma factor; K03092 RNA polymerase sigma-54 factor Tax=RBG_16_Acidobacteria_68_9_curated
rpoN; RNA polymerase sigma factor
13_2_20cm_2_scaffold_3670_4
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

1772..2767
DNA (996bp) protein (332aa)
putative glycosyltransferase (EC:2.4.-.-) Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Putative glycosyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8U8_GEMAT
glycosyl transferase family 2
13_2_20cm_2_scaffold_3670_5
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(2764..3993)
DNA (1230bp) protein (410aa)
group 1 glycosyl transferase Tax=RBG_16_Gemmatimonadetes_66_8_curated
group 1 family glycosyltransferase id=7201127 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
Glycosyltransferase
13_2_20cm_2_scaffold_3670_6
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

4052..4666
DNA (615bp) protein (205aa)
Methyltransferase type 11 n=1 Tax=Planctomyces brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 / NBRC 103401 / IFAM 1448) RepID=F0SQU4_PLABD
hypothetical protein; K07027 Tax=RBG_16_Gemmatimonadetes_66_8_curated
methyltransferase type 11
13_2_20cm_2_scaffold_3670_7
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

4819..5577
DNA (759bp) protein (253aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8U6_GEMAT
hypothetical membrane protein; K07027 Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
hypothetical membrane protein
13_2_20cm_2_scaffold_3670_8
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

5574..7925
DNA (2352bp) protein (784aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A770_GEMAT
hypothetical membrane protein Tax=GWC2_Gemmatimonadetes_71_10_curated
hypothetical membrane protein
13_2_20cm_2_scaffold_3670_9
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

7918..8742
DNA (825bp) protein (275aa)
putative polyprenol-phosphate mannosyltransferase; K00721 dolichol-phosphate mannosyltransferase [EC:2.4.1.83] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Putative polyprenol-phosphate mannosyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8U4_GEMAT
putative polyprenol-phosphate mannosyltransferase
13_2_20cm_2_scaffold_3670_10
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

8739..9377
DNA (639bp) protein (213aa)
dapE; diaminopimelate epimerase (EC:5.1.1.7); K01778 diaminopimelate epimerase [EC:5.1.1.7] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Diaminopimelate epimerase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=DAPF_GEMAT
Diaminopimelate epimerase
13_2_20cm_2_scaffold_3670_11
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(9452..10126)
DNA (675bp) protein (225aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_2_20cm_2_scaffold_3670_trna_2
unknown

Not on your lists

comp(10209..10282)
DNA (74bp)
transferRNA
13_2_20cm_2_scaffold_3670_12
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10305..10841)
DNA (537bp) protein (179aa)
Adenine phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000256|SAAS:SAAS00084274}; Short=APRT {ECO:0000256|HAMAP-Rule:MF_00004};; EC=2.4.2.7 {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000
Adenine phosphoribosyltransferase n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9QN48_9DELT
adenine phosphoribosyltransferase
13_2_20cm_2_scaffold_3670_13
RLO_RIF02_62_27, RIF2, Bacteria

Not on your lists

comp(10857..11120)
DNA (264bp) protein (88aa)
acylphosphatase; K01512 acylphosphatase [EC:3.6.1.7] Tax=RIFCSPLOWO2_12_FULL_RIF02_62_27_curated
Acylphosphatase n=1 Tax=Haemophilus pittmaniae HK 85 RepID=F9QC67_9PAST
acyP; acylphosphatase
13_2_20cm_2_scaffold_3670_14
Geobacter sp. M21, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11138..11779)
DNA (642bp) protein (214aa)
SNARE associated Golgi protein-related protein n=1 Tax=Geobacter sp. (strain M21) RepID=C6E083_GEOSM
hypothetical protein
SNARE associated Golgi protein-related protein {ECO:0000313|EMBL:ACT16699.1}; TaxID=443144 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" sour
13_2_20cm_2_scaffold_3670_15
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(11772..12452)
DNA (681bp) protein (227aa)
pcm; protein-L-isoaspartate O-methyltransferase (EC:2.1.1.77); K00573 protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Protein-L-isoaspartate O-methyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8T8_GEMAT
Protein-L-isoaspartate O-methyltransferase
13_2_20cm_2_scaffold_3670_16
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(12434..13183)
DNA (750bp) protein (250aa)
surE; 5'-nucleotidase SurE (EC:3.1.3.5); K03787 5'-nucleotidase [EC:3.1.3.5] Tax=RBG_16_Gemmatimonadetes_66_8_curated
surE; 5'-nucleotidase SurE (EC:3.1.3.5)
5'-nucleotidase SurE n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=SURE_GEMAT
13_2_20cm_2_scaffold_3670_17
CG_Anaero_02, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(13180..13881)
DNA (702bp) protein (234aa)
putative glycosyltransferase (EC:2.4.-.-) Tax=CG_Anaero_02
Putative glycosyltransferase id=2175658 bin=GWB2_Chloroflexi_54_36 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
undecaprenyl-phosphate glycosyltransferase
13_2_20cm_2_scaffold_3670_18
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(13865..14248)
DNA (384bp) protein (128aa)
MerR family transcriptional regulator n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8T6_GEMAT
MerR family transcriptional regulator Tax=RBG_16_Gemmatimonadetes_66_8_curated
regulatory protein MerR
13_2_20cm_2_scaffold_3670_19
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(14245..15252)
DNA (1008bp) protein (336aa)
gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+); K00057 glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Glycerol-3-phosphate dehydrogenase [NAD(P)+]
Glycerol-3-phosphate dehydrogenase [NAD(P)+] id=3046740 bin=GWC2_Deltaproteobacteria_56_8 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_56_8 organism_group=Deltaproteobacteria
13_2_20cm_2_scaffold_3670_20
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(15386..15865)
DNA (480bp) protein (160aa)
membrane protein; K08591 glycerol-3-phosphate acyltransferase PlsY [EC:2.3.1.15] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Glycerol-3-phosphate acyltransferase n=1 Tax=uncultured Desulfofustis sp. PB-SRB1 RepID=V4JIE3_9DELT
plsY; hypothetical protein
13_2_20cm_2_scaffold_3670_21
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(15820..16959)
DNA (1140bp) protein (380aa)
GTPase Der n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=DER_GEMAT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
GTP-binding protein engA
13_2_20cm_2_scaffold_3670_22
Enhygromyxa salina, Enhygromyxa, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16913..17059)
DNA (147bp) protein (49aa)
GTPase Der n=1 Tax=Leptospirillum ferrooxidans (strain C2-3) RepID=I0IQP4_LEPFC
GTPase Der {ECO:0000256|HAMAP-Rule:MF_00195, ECO:0000256|RuleBase:RU004481}; GTP-binding protein EngA {ECO:0000256|HAMAP-Rule:MF_00195}; TaxID=215803 species="Bacteria; Proteobacteria; Deltaproteobact
engA; GTP-binding protein
13_2_20cm_2_scaffold_3670_23
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(17056..18414)
DNA (1359bp) protein (453aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8T2_GEMAT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_2_20cm_2_scaffold_3670_24
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(18502..19983)
DNA (1482bp) protein (494aa)
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
13_2_20cm_2_scaffold_3670_25
BJP_IG2157_Anaerolineales_55_23, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(20191..21021)
DNA (831bp) protein (277aa)
Glycoside hydrolase family 16 n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LSA6_HALO1
glycoside hydrolase family protein
Tax=BJP_IG2157_Anaerolineales_55_23
13_2_20cm_2_scaffold_3670_trna_1
unknown

Not on your lists

comp(21604..21675)
DNA (72bp)
transferRNA
13_2_20cm_2_scaffold_3670_26
unknown

Not on your lists

comp(21733..22818)
DNA (1086bp) protein (362aa)

This feature has no annotations

13_2_20cm_2_scaffold_3670_27
unknown

Not on your lists

comp(22785..23201)
DNA (417bp) protein (139aa)

This feature has no annotations

13_2_20cm_2_scaffold_3670_28
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(23204..24388)
DNA (1185bp) protein (395aa)
UPF0272 protein Moth_2512 n=1 Tax=Moorella thermoacetica (strain ATCC 39073) RepID=Y2512_MOOTA id=5223158 bin=16ft_combo_ws3_JS1 species=Moorella thermoacetica genus=Moorella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
TIGR00299 family protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
UPF0272 protein
Displaying items 1-30 of 35 in total

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