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13_2_20cm_2_scaffold_6801_20

Organism: 13_2_20cm_2_UNK

megabin RP 54 / 55 MC: 54 BSCG 51 / 51 MC: 51 ASCG 38 / 38 MC: 38
Location: comp(16985..17572)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-E factor n=1 Tax=Nocardioidaceae bacterium Broad-1 RepID=E9UTS9_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 34.9
  • Coverage: 172.0
  • Bit_score: 94
  • Evalue 9.70e-17
RNA polymerase subunit sigma-70 {ECO:0000313|EMBL:KJR11591.1}; TaxID=1844 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides luteus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 37.9
  • Coverage: 169.0
  • Bit_score: 101
  • Evalue 1.10e-18
sigma-70 family RNA polymerase similarity KEGG
DB: KEGG
  • Identity: 34.5
  • Coverage: 194.0
  • Bit_score: 91
  • Evalue 3.90e-16

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Taxonomy

Nocardioides luteus → Nocardioides → Propionibacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 588
GTGCCGGCTTTGGCCGACCTGGACCCAGATGCGTACGAGCCTGGCTCCAGGGAAGACTTCGACCGCCTGTACCGAACCGCCTATCCGCGCGTGTACCGCACGCTCGCTGCGATCTTGAGCGACCCGGAGGCGGCGGAGGACTGCGTCCAGGACGCCTTCGTGCAGGCGTTTCAGGCGTGGAAGCGCTGGCGGCCGGACGCGCCGGCCGAAGCCTGGGTGCACAGGATCGCCGTCAACCGCGCCATCTCCTACCGCCGCAGCGCGAAGCTGCGTCAGGTCGGCGAGGTGCTCCGGCGATTGGGCCGCCCGTCACAGCCGGCCGACCCCGCCGATGTGGCGACGCGAGGCGACCTTCTGTCTGCGCTCCGCTCCCTCCCGCCCAAGCTCGCCGCCGCAATCGTGCTCCGCCATTACCACGGCTACAACAACAGGGAGATCGCCGCCGCGCTGGGCGTATCCGAGCGGACGGTGGGCACGCGCTTGCGCCAGGCGGGCGAGAGACTTCGCGCCGTTCTCGGTCCTTCCTTCTCACTTGGCGCCGCTCCAGCGTTTCCTTCAGACAAACGTGAGCTCTATGCCGAAGATTGA
PROTEIN sequence
Length: 196
VPALADLDPDAYEPGSREDFDRLYRTAYPRVYRTLAAILSDPEAAEDCVQDAFVQAFQAWKRWRPDAPAEAWVHRIAVNRAISYRRSAKLRQVGEVLRRLGRPSQPADPADVATRGDLLSALRSLPPKLAAAIVLRHYHGYNNREIAAALGVSERTVGTRLRQAGERLRAVLGPSFSLGAAPAFPSDKRELYAED*