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13_1_40cm_2_scaffold_1154

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_1154_1
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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2..298
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1Y9K6_9BACT
Anti-sigma regulatory factor (Ser/Thr protein kinase) {ECO:0000313|EMBL:KCZ71458.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae;
anti-sigma regulatory factor, serine/threonine protein kinase
13_1_40cm_2_scaffold_1154_2
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

Not on your lists

291..932
DNA (642bp) protein (214aa)
hypothetical protein n=1 Tax=Burkholderia sp. JPY347 RepID=UPI0003683974
protein serine/threonine phosphatase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
protein serine/threonine phosphatase
13_1_40cm_2_scaffold_1154_3
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

929..2347
DNA (1419bp) protein (473aa)
Two component, sigma54 specific, transcriptional regulator, Fis family id=2304889 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Fis family transcriptional regulator Tax=GWA2_Rokubacteria_73_35_curated
Fis family transcriptional regulator
13_1_40cm_2_scaffold_1154_4
Nematostella vectensis, Nematostella, Actiniaria, Hexacorallia, Cnidaria, Metazoa

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2344..3636
DNA (1293bp) protein (431aa)
Predicted protein n=1 Tax=Nematostella vectensis RepID=A7S2Q6_NEMVE
Predicted protein {ECO:0000313|EMBL:EDO42047.1}; TaxID=45351 species="Eukaryota; Metazoa; Cnidaria; Anthozoa; Hexacorallia; Actiniaria; Edwardsiidae; Nematostella.;" source="Nematostella vectensis (St
hypothetical protein
13_1_40cm_2_scaffold_1154_5
unknown

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comp(3644..3841)
DNA (198bp) protein (66aa)

This feature has no annotations

13_1_40cm_2_scaffold_1154_6
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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4009..5664
DNA (1656bp) protein (552aa)
Amidase {ECO:0000313|EMBL:KFA93449.1}; EC=3.5.1.4 {ECO:0000313|EMBL:KFA93449.1};; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae
Amidotransferase-related protein n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9PGG0_9DELT
gatA2; amidase
13_1_40cm_2_scaffold_1154_7
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(5661..6248)
DNA (588bp) protein (196aa)
DNA-3-methyladenine glycosylase I (EC:3.2.2.20); K01246 DNA-3-methyladenine glycosylase I [EC:3.2.2.20] id=14431486 bin=bin3_NC10 species=Desulfovibrio salexigens genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
DNA-3-methyladenine glycosylase I (EC:3.2.2.20); K01246 DNA-3-methyladenine glycosylase I [EC:3.2.2.20] Tax=CSP1_5_NC10
tag; DNA-3-methyladenine glycosylase I (EC:3.2.2.20)
13_1_40cm_2_scaffold_1154_8
Oceanicola batsensis, Oceanicola, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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6325..7284
DNA (960bp) protein (320aa)
Quinone oxidoreductase n=1 Tax=Oceanicola batsensis HTCC2597 RepID=A3U1B8_9RHOB
Quinone oxidoreductase {ECO:0000313|EMBL:EAQ02101.1}; TaxID=252305 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceanicola.;" source="Oceanicola batsensis
NAD(P)H quinone oxidoreductase
13_1_40cm_2_scaffold_1154_9
Tatlockia micdadei, Tatlockia, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

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7337..8464
DNA (1128bp) protein (376aa)
Putative uncharacterized protein n=1 Tax=Burkholderia sp. (strain 383) RepID=Q39N69_BURS3
conserved protein of unknown function
Uncharacterized protein {ECO:0000313|EMBL:CEG59969.1}; TaxID=451 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Tatlockia.;" source="Tatlockia micdadei (Legione
13_1_40cm_2_scaffold_1154_10
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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8506..10557
DNA (2052bp) protein (684aa)
endothelin-converting protein 1 (EC:3.4.24.71); K07386 putative endopeptidase [EC:3.4.24.-] Tax=RBG_16_RIF_WS3X_71_46_curated
Endothelin-converting enzyme 1 n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B2A0D1_OPITP
peptidase M13
13_1_40cm_2_scaffold_1154_11
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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10565..11341
DNA (777bp) protein (259aa)
hypothetical protein; K00540 [EC:1.-.-.-] Tax=GWC2_Gemmatimonadetes_71_10_curated
hypothetical protein; K00540 [EC:1.-.-.-] id=24472762 bin=RBG_19FT_COMBO_Aminicenantes_65_30 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=RBG_19FT_COMBO_Aminicenantes_65_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
short-chain dehydrogenase/reductase SDR (EC:1.1.1.276)
13_1_40cm_2_scaffold_1154_12
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(11338..12336)
DNA (999bp) protein (333aa)
putative oxidoreductase; K00459 nitronate monooxygenase [EC:1.13.12.16] Tax=RBG_16_Acidobacteria_70_10_curated
2-nitropropane dioxygenase id=3531975 bin=GWB1_Deltaproteobacteria_rel_55_8 species=Plesiocystis pacifica genus=Plesiocystis taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
putative oxidoreductase
13_1_40cm_2_scaffold_1154_13
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(12333..12794)
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A859_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
hypothetical protein
13_1_40cm_2_scaffold_1154_14
Oscillatoriales cyanobacterium JSC-12, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(12791..14833)
DNA (2043bp) protein (681aa)
hypothetical protein n=1 Tax=Leptolyngbya boryana RepID=UPI00035E4A6B
Dipeptidyl aminopeptidase/acylaminoacyl peptidase {ECO:0000313|EMBL:EKQ67231.1}; TaxID=864702 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales.;" source="Oscillatoriales cyanob
hypothetical protein
13_1_40cm_2_scaffold_1154_15
GWC2_Elusimicrobia_65_9_curated, Elusimicrobia, Bacteria

Not on your lists

14923..16296
DNA (1374bp) protein (458aa)
Adenosylmethionine-8-amino-7-oxononanoate aminotransferase id=4917884 bin=GWA2_Elusimicrobia_66_18 species=Cystobacter fuscus genus=Cystobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
class III aminotransferase Tax=GWC2_Elusimicrobia_65_9_curated
class III aminotransferase
13_1_40cm_2_scaffold_1154_16
R_Elusimicrobia_57_9, Elusimicrobia, Bacteria

Not on your lists

16293..17879
DNA (1587bp) protein (529aa)
aldH; aldehyde dehydrogenase (EC:1.2.1.-); K00294 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.1.12] Tax=RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_curated
aldH; aldehyde dehydrogenase (EC:1.2.1.-)
1-pyrroline-5-carboxylate dehydrogenase 1 id=4917885 bin=GWA2_Elusimicrobia_66_18 species=Stigmatella aurantiaca genus=Stigmatella taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
13_1_40cm_2_scaffold_1154_17
GWA2_Elusimicrobia_69_24_curated, Elusimicrobia, Bacteria

Not on your lists

17876..19207
DNA (1332bp) protein (444aa)
4-aminobutyrate aminotransferase; K00823 4-aminobutyrate aminotransferase [EC:2.6.1.19] Tax=GWA2_Elusimicrobia_69_24_curated
Acetylornithine aminotransferase id=4970915 bin=GWA2_Elusimicrobia_69_24 species=unknown genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
acetylornithine transaminase
13_1_40cm_2_scaffold_1154_18
RBG_16_Elusimicrobia_66_12_curated, Elusimicrobia, Bacteria

Not on your lists

19239..20126
DNA (888bp) protein (296aa)
3-oxoadipate:succinyl-CoA transferase subunit A; K01039 glutaconate CoA-transferase, subunit A [EC:2.8.3.12] Tax=RBG_16_Elusimicrobia_66_12_curated
Subunit A 3-oxoadipate CoA-transferase id=4917917 bin=GWA2_Elusimicrobia_66_18 species=unknown genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
3-oxoadipate:succinyl-CoA transferase subunit A
13_1_40cm_2_scaffold_1154_19
CG_Elusi_04, Elusimicrobia, Bacteria

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20146..20889
DNA (744bp) protein (248aa)
3-oxoacid CoA-transferase n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7U3G7_MYXSD rbh
3-oxoacid CoA-transferase Tax=CG_Elusi_04
3-oxoacid CoA-transferase
13_1_40cm_2_scaffold_1154_20
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

20886..22613
DNA (1728bp) protein (576aa)
hypothetical protein n=1 Tax=Legionella tunisiensis RepID=UPI000363D56C
secreted protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
conserved protein of unknown function
13_1_40cm_2_scaffold_1154_21
R_Gammaproteobacteria_61_13, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22592..25132
DNA (2541bp) protein (847aa)
Secreted protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WJ81_9GAMM
periplasmic component of the Tol biopolymer transport system Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_61_13_curated
periplasmic component of the Tol biopolymer transport system
13_1_40cm_2_scaffold_1154_22
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(25129..26397)
DNA (1269bp) protein (423aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA78_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_40cm_2_scaffold_1154_23
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(26760..28145)
DNA (1386bp) protein (462aa)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
13_1_40cm_2_scaffold_1154_24
unknown

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28715..28999
DNA (285bp) protein (95aa)

This feature has no annotations

13_1_40cm_2_scaffold_1154_25
RIFOXYC2_FULL_Ignavibacteria_38_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

29201..30529
DNA (1329bp) protein (443aa)
Amino acid/polyamine/organocation transporter, APC superfamily id=3948639 bin=GWF2_Melioribacter_38_21 species=Candidatus Koribacter versatilis genus=Candidatus Koribacter taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWF2_Melioribacter_38_21 organism_group=Ignavibacteria
amino acid transporter Tax=RIFOXYC2_FULL_Ignavibacteria_38_25_curated
amino acid permease
13_1_40cm_2_scaffold_1154_26
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(30535..31842)
DNA (1308bp) protein (436aa)
peptidase M1 membrane alanine aminopeptidase; K01256 aminopeptidase N [EC:3.4.11.2] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Membrane alanyl aminopeptidase id=1250356 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
peptidase M1 membrane alanine aminopeptidase
Displaying 26 items

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