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13_1_40cm_2_scaffold_1159

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_1159_1
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(1..969)
DNA (969bp) protein (323aa)
GTP-binding protein TypA n=4 Tax=Bacteria RepID=C1A9K9_GEMAT
typA; GTP-binding protein TypA; K06207 GTP-binding protein Tax=GWC2_Gemmatimonadetes_71_10_curated
GTP-binding protein TypA
13_1_40cm_2_scaffold_1159_2
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(1064..1879)
DNA (816bp) protein (272aa)
Cation diffusion facilitator family transporter n=1 Tax=Paenibacillus curdlanolyticus YK9 RepID=E0IAW3_9BACL
zinc transporter ZitB; K03295 cation efflux system protein, CDF family Tax=GWC2_Gemmatimonadetes_71_10_curated
zinc transporter ZitB
13_1_40cm_2_scaffold_1159_3
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

2042..3376
DNA (1335bp) protein (445aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9X1_GEMAT
hypothetical membrane protein Tax=GWC2_Gemmatimonadetes_71_10_curated
hypothetical membrane protein
13_1_40cm_2_scaffold_1159_4
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(3373..4188)
DNA (816bp) protein (272aa)
pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase (EC:1.1.1.262); K00097 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
4-hydroxythreonine-4-phosphate dehydrogenase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9L0_GEMAT
4-hydroxythreonine-4-phosphate dehydrogenase
13_1_40cm_2_scaffold_1159_5
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(4247..5551)
DNA (1305bp) protein (435aa)
putative peptidyl-prolyl cis-trans isomerase (EC:5.2.1.8); K03771 peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Putative peptidyl-prolyl cis-trans isomerase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9L1_GEMAT
SurA domain-containing protein
13_1_40cm_2_scaffold_1159_6
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(5529..6998)
DNA (1470bp) protein (490aa)
putative peptidyl-prolyl cis-trans isomerase (EC:5.2.1.8); K03771 peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8] Tax=GWC2_Gemmatimonadetes_71_10_curated
Putative peptidyl-prolyl cis-trans isomerase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9L2_GEMAT
PpiC-type peptidyl-prolyl cis-trans isomerase
13_1_40cm_2_scaffold_1159_7
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(7493..10276)
DNA (2784bp) protein (928aa)
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=861299 species="Bacteria; Ge
Transcription-repair-coupling factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9L3_GEMAT
transcription-repair coupling factor
13_1_40cm_2_scaffold_1159_8
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(10276..12015)
DNA (1740bp) protein (580aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9L4_GEMAT
hypothetical membrane protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical membrane protein
13_1_40cm_2_scaffold_1159_9
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(12012..12896)
DNA (885bp) protein (295aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9L5_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
protein of unknown function DUF58
13_1_40cm_2_scaffold_1159_10
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

13070..13975
DNA (906bp) protein (302aa)
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
PEGA domain protein id=1250793 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
PEGA domain protein
13_1_40cm_2_scaffold_1159_11
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

14411..15940
DNA (1530bp) protein (510aa)
hypothetical protein n=1 Tax=Woodsholea maritima RepID=UPI000365A90B
peptidase M28 Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
putative aminopeptidase
13_1_40cm_2_scaffold_1159_12
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(15944..17008)
DNA (1065bp) protein (355aa)
Transcription termination factor Rho n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=RHO_GEMAT
transcription termination factor; K03628 transcription termination factor Rho Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
transcription termination factor
13_1_40cm_2_scaffold_1159_13
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

17107..18906
DNA (1800bp) protein (600aa)
Elongation factor 4 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9L7_GEMAT
lepA; GTP-binding protein LepA; K03596 GTP-binding protein LepA Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
lepA; GTP-binding protein LepA
13_1_40cm_2_scaffold_1159_14
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

18911..19972
DNA (1062bp) protein (354aa)
putative heptosyltransferase (EC:2.4.-.-); K02843 heptosyltransferase II [EC:2.4.-.-] Tax=GWC2_Gemmatimonadetes_71_10_curated
putative heptosyltransferase (EC:2.4.-.-)
Putative heptosyltransferase id=3656687 bin=GWC2_Ignavibacteria_56_12 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
13_1_40cm_2_scaffold_1159_15
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

19950..20915
DNA (966bp) protein (322aa)
glk; glucokinase (EC:2.7.1.2); K00845 glucokinase [EC:2.7.1.2] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Glucokinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9L9_GEMAT
ROK family protein
13_1_40cm_2_scaffold_1159_16
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

20912..21823
DNA (912bp) protein (304aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9M0_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PfkB domain protein
13_1_40cm_2_scaffold_1159_17
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

21820..22743
DNA (924bp) protein (308aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9M1_GEMAT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_40cm_2_scaffold_1159_18
unknown

Not on your lists

22740..23177
DNA (438bp) protein (146aa)

This feature has no annotations

13_1_40cm_2_scaffold_1159_19
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

23174..24328
DNA (1155bp) protein (385aa)
Cystathionine beta-lyase MetC n=1 Tax=uncultured Chloroflexi bacterium RepID=H5SPC9_9CHLR
metB; Cystathionine gamma-synthase Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Cys/Met metabolism pyridoxal-phosphate-dependent protein
13_1_40cm_2_scaffold_1159_20
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

24329..24979
DNA (651bp) protein (217aa)
Cell division ATP-binding protein FtsE n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9M5_GEMAT
ftsE; cell division ATP-binding protein FtsE; K09812 cell division transport system ATP-binding protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
cell division ATP-binding protein FtsE
13_1_40cm_2_scaffold_1159_21
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

24976..25773
DNA (798bp) protein (266aa)
Cell division protein FtsX n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9M6_GEMAT
ftsX; cell division protein FtsX; K09811 cell division transport system permease protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
protein of unknown function DUF214
13_1_40cm_2_scaffold_1159_22
unknown

Not on your lists

25805..26437
DNA (633bp) protein (211aa)

This feature has no annotations

13_1_40cm_2_scaffold_1159_23
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(26928..28376)
DNA (1449bp) protein (483aa)
Putative two-component response regulator n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5L7_GEMAT
putative two-component response regulator; K02488 two-component system, cell cycle response regulator Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
putative two-component response regulator
13_1_40cm_2_scaffold_1159_24
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28492..29118
DNA (627bp) protein (209aa)
protein-L-isoaspartate O-methyltransferase (EC:2.1.1.77); K00573 protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] Tax=RBG_16_Desulfobacca_60_12_curated
Protein-L-isoaspartate O-methyltransferase n=1 Tax=Methanolinea tarda NOBI-1 RepID=G6FI22_9EURY
protein-L-isoaspartate O-methyltransferase
13_1_40cm_2_scaffold_1159_25
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

29115..30020
DNA (906bp) protein (302aa)
Probable endonuclease 4 {ECO:0000256|HAMAP-Rule:MF_00152}; EC=3.1.21.2 {ECO:0000256|HAMAP-Rule:MF_00152};; Endodeoxyribonuclease IV {ECO:0000256|HAMAP-Rule:MF_00152}; Endonuclease IV {ECO:0000256|HAMA
Probable endonuclease 4 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9M8_GEMAT
endonuclease 4
13_1_40cm_2_scaffold_1159_26
unknown

Not on your lists

30017..30370
DNA (354bp) protein (118aa)

This feature has no annotations

13_1_40cm_2_scaffold_1159_27
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

30465..31730
DNA (1266bp) protein (422aa)
Putative uncharacterized protein n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XT06_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
hypothetical protein
13_1_40cm_2_scaffold_1159_28
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

31732..32790
DNA (1059bp) protein (353aa)
ABC-type metal ion transporter, periplasmic subunit n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XT05_9BACT
troA; periplasmic zinc binding protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
troA; periplasmic zinc binding protein
13_1_40cm_2_scaffold_1159_29
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

32810..33643
DNA (834bp) protein (278aa)
ABC-type transporter, integral membrane subunit n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XT04_9BACT
ABC-3 protein; K02075 zinc/manganese transport system permease protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
ABC-3 protein
13_1_40cm_2_scaffold_1159_30
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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34111..36411
DNA (2301bp) protein (767aa)
TonB-dependent outer membrane transport protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7Q7_GEMAT
TonB-dependent outer membrane transport protein
TonB-dependent outer membrane transport protein {ECO:0000313|EMBL:BAH38267.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimon
Displaying items 1-30 of 33 in total

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