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13_1_40cm_2_scaffold_1094

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_1094_1
unknown

Not on your lists

comp(3..119)
DNA (117bp) protein (39aa)

This feature has no annotations

13_1_40cm_2_scaffold_1094_2
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(218..1015)
DNA (798bp) protein (266aa)
ABC-2 type transporter n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G420_GEOUR
polysaccharide/polyol phosphate ABC transporter permease; K09690 lipopolysaccharide transport system permease protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
ABC-2 type transporter
13_1_40cm_2_scaffold_1094_3
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(1086..2963)
DNA (1878bp) protein (626aa)
Putative carbamoyl transferase; K00612 carbamoyltransferase [EC:2.1.3.-] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
Putative carbamoyl transferase n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AN70_IGNAJ
carbamoyl transferase
13_1_40cm_2_scaffold_1094_4
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(3072..3230)
DNA (159bp) protein (53aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
Uncharacterized protein id=4225805 bin=GWF2_OP3_43_52 species=unknown genus=Leptospira taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
hypothetical protein
13_1_40cm_2_scaffold_1094_5
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(3498..3893)
DNA (396bp) protein (132aa)
hypothetical protein n=1 Tax=Synechococcus sp. CB0101 RepID=UPI00020019E1
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
hypothetical protein
13_1_40cm_2_scaffold_1094_6
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(3916..5679)
DNA (1764bp) protein (588aa)
hypothetical protein
Putative Glycosyl transferase family 39 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
id=5087272 bin=GWF1_OP11_31_35_complete species=OP11_1 genus=OP11_1 taxon_order=OP11_1 taxon_class=OP11_1 phylum=OP11 tax=GWF1_OP11_31_35_complete organism_group=OP11 (Microgenomates) organism_desc=Complete genome (was OP11_1)
13_1_40cm_2_scaffold_1094_7
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5744..6871)
DNA (1128bp) protein (376aa)
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
13_1_40cm_2_scaffold_1094_8

Not on your lists

comp(6868..7965)
DNA (1098bp) protein (366aa)
Uncharacterized protein {ECO:0000313|EMBL:KKM95888.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
13_1_40cm_2_scaffold_1094_9
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

8005..9192
DNA (1188bp) protein (396aa)
glycosyltransferase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
glycosyltransferase id=12557116 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
glycosyltransferase-like protein
13_1_40cm_2_scaffold_1094_10
RBG_16_Chloroflexi_64_43_curated, Chloroflexi, Bacteria

Not on your lists

9212..10540
DNA (1329bp) protein (443aa)
Glycosyl transferase family 39 id=5005798 bin=GWA2_Elusi_like_61_42 species=Microcoleus vaginatus genus=Microcoleus taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWA2_Elusi_like_61_42 organism_group=Elusimicrobia organism_desc=Possibly not Elusi
Tax=RBG_16_Chloroflexi_64_43_curated
13_1_40cm_2_scaffold_1094_11

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comp(10497..11285)
DNA (789bp) protein (263aa)
Formyl transferase-like protein
Formyl transferase-like protein {ECO:0000313|EMBL:AJF60160.1}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
Formyl transferase-like id=5241169 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
13_1_40cm_2_scaffold_1094_12
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(11282..12193)
DNA (912bp) protein (304aa)
Polysaccharide deacetylase domain-containing protein n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CP29_MYXFH
Polysaccharide deacetylase {ECO:0000313|EMBL:AKF80404.1}; TaxID=1334629 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myx
polysaccharide deacetylase domain-containing protein
13_1_40cm_2_scaffold_1094_13
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(12193..13548)
DNA (1356bp) protein (452aa)
UDP-galactopyranose mutase (EC:5.4.99.9)
Uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q6M5_9BACT
amine oxidase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
13_1_40cm_2_scaffold_1094_14
RBG_16_Planctomycetes_59_8_curated, Planctomycetes, Bacteria

Not on your lists

comp(13628..14278)
DNA (651bp) protein (217aa)
type 11 methyltransferase Tax=RBG_16_Planctomycetes_59_8_curated
Methyltransferase type 11 id=5800021 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
type 11 methyltransferase
13_1_40cm_2_scaffold_1094_15
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(14256..15200)
DNA (945bp) protein (315aa)
hypothetical protein; K02377 GDP-L-fucose synthase [EC:1.1.1.271]
nucleotide sugar epimerase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
13_1_40cm_2_scaffold_1094_16
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(15197..16264)
DNA (1068bp) protein (356aa)
rffG1; dTDP-glucose 4,6-dehydratase 2 (EC:4.2.1.46) Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
NAD-dependent epimerase/dehydratase n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LIQ8_HALO1 rbh
NAD-dependent epimerase/dehydratase
13_1_40cm_2_scaffold_1094_17
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(16438..17079)
DNA (642bp) protein (214aa)
MarR family transcriptional regulator Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
Putative transcriptional regulator, AsnC family id=2250628 bin=GWA2_Elusimicrobia_69_24 species=Desulfococcus oleovorans genus=Desulfococcus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
MarR family transcriptional regulator
13_1_40cm_2_scaffold_1094_18
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(17162..17872)
DNA (711bp) protein (237aa)
N-acylneuraminate cytidylyltransferase (EC:2.7.7.43); K00983 N-acylneuraminate cytidylyltransferase [EC:2.7.7.43] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
N-acylneuraminate cytidylyltransferase (EC:2.7.7.43)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI0003628D67
13_1_40cm_2_scaffold_1094_19
GWF2_WOR_2_43_52_curated, WOR-2, Bacteria

Not on your lists

comp(17869..18909)
DNA (1041bp) protein (347aa)
N-acetylneuraminate synthase (EC:2.5.1.56); K01654 N-acetylneuraminate synthase [EC:2.5.1.56] Tax=GWF2_WOR_2_43_52_curated
putative n-acetylneuraminate synthase (EC:2.5.1.56)
N-acetylneuraminate synthase id=4686004 bin=GWC2_OP3_44_8 species=Methanococcus aeolicus genus=Methanococcus taxon_order=Methanococcales taxon_class=Methanococci phylum=Euryarchaeota tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52 rbh
13_1_40cm_2_scaffold_1094_20
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(18909..20093)
DNA (1185bp) protein (395aa)
UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing n=1 Tax=Bizionia argentinensis JUB59 RepID=G2EAT2_9FLAO
UDP-N-acetylglucosamine 2-epimerase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
UDP-N-acetylglucosamine 2-epimerase
13_1_40cm_2_scaffold_1094_21
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(20268..21728)
DNA (1461bp) protein (487aa)
aldehyde dehydrogenase (EC:1.2.1.3); K00128 aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
aldehyde dehydrogenase (EC:1.2.1.3)
NAD-dependent aldehyde dehydrogenase id=2619814 bin=GWC1_KAZAN_52_13 species=GWC1_KAZAN_52_13 genus=GWC1_KAZAN_52_13 taxon_order=GWC1_KAZAN_52_13 taxon_class=GWC1_KAZAN_52_13 phylum=KAZAN tax=GWC1_KAZAN_52_13 organism_group=Kazan rbh
13_1_40cm_2_scaffold_1094_22
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(21996..23942)
DNA (1947bp) protein (649aa)
transketolase; K00615 transketolase [EC:2.2.1.1] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
Transketolase id=2619808 bin=GWC1_KAZAN_52_13 species=GWC1_KAZAN_52_13 genus=GWC1_KAZAN_52_13 taxon_order=GWC1_KAZAN_52_13 taxon_class=GWC1_KAZAN_52_13 phylum=KAZAN tax=GWC1_KAZAN_52_13 organism_group=Kazan rbh
transketolase
13_1_40cm_2_scaffold_1094_23
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(24051..24872)
DNA (822bp) protein (274aa)
short-chain dehydrogenase/reductase SDR Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
Oxidoreductase, short chain dehydrogenase/reductase family protein id=2619819 bin=GWC1_KAZAN_52_13 species=GWC1_KAZAN_52_13 genus=GWC1_KAZAN_52_13 taxon_order=GWC1_KAZAN_52_13 taxon_class=GWC1_KAZAN_52_13 phylum=KAZAN tax=GWC1_KAZAN_52_13 organism_group=Kazan rbh
oxidoreductase, short chain dehydrogenase
13_1_40cm_2_scaffold_1094_24
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(25161..26504)
DNA (1344bp) protein (448aa)
UDP-glucose 6-dehydrogenase (EC:1.1.1.22); K13015 UDP-N-acetyl-D-glucosamine dehydrogenase [EC:1.1.1.-] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
UDP-glucose 6-dehydrogenase (EC:1.1.1.22)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00036749FB rbh
13_1_40cm_2_scaffold_1094_25
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(26529..27521)
DNA (993bp) protein (331aa)
gmd; GDP-mannose 4,6-dehydratase (EC:4.2.1.47) Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
GDP-mannose 4,6-dehydratase; K01711 GDPmannose 4,6-dehydratase [EC:4.2.1.47] id=12555648 bin=CNBR_ACIDO species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? rbh
gmd; GDP-mannose 4,6-dehydratase (EC:4.2.1.47)
13_1_40cm_2_scaffold_1094_26
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

27546..28526
DNA (981bp) protein (327aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
metW; Methionine biosynthesis protein MetW id=12555641 bin=CNBR_ACIDO species=Methanocella conradii genus=Methanocella taxon_order=Methanocellales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Displaying 26 items

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