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13_1_40cm_2_scaffold_1142

Search features with annotation key words

Displaying items 1-30 of 50 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_1142_1
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(1..2940)
DNA (2940bp) protein (980aa)
molybdopterin oxidoreductase Fe4S4 region; K00184 molybdopterin oxidoreductase, iron-sulfur binding subunit [EC:1.2.7.-] id=14429767 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
molybdopterin oxidoreductase Fe4S4 region; K00184 molybdopterin oxidoreductase, iron-sulfur binding subunit [EC:1.2.7.-] Tax=CSP1_5_NC10
putative oxidoreductase
13_1_40cm_2_scaffold_1142_2
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(2942..3514)
DNA (573bp) protein (191aa)
cytochrome c3 (EC:1.7.2.2) Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
cytochrome c2 id=14426356 bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=Flavobacteriia phylum=Bacteroidetes tax=bin1_lowGC organism_group=Unknown_CP
actA; menaquinol oxidoreductase complex ACIII, cytochrome c subunit ActA
13_1_40cm_2_scaffold_1142_3
unknown

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comp(3602..4063)
DNA (462bp) protein (154aa)

This feature has no annotations

13_1_40cm_2_scaffold_1142_4
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(4032..5207)
DNA (1176bp) protein (392aa)
Mandelate racemase/muconate lactonizing protein; K02549 O-succinylbenzoate synthase [EC:4.2.1.113] Tax=GWC2_Gemmatimonadetes_71_10_curated
Mandelate racemase/muconate lactonizing protein n=1 Tax=Kosmotoga olearia (strain TBF 19.5.1) RepID=C5CFI0_KOSOT
Mandelate racemase/muconate lactonizing protein
13_1_40cm_2_scaffold_1142_5
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(5188..6348)
DNA (1161bp) protein (387aa)
Uncharacterized protein n=1 Tax=Paenibacillus barengoltzii G22 RepID=R9LL98_9BACL
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
hypothetical protein
13_1_40cm_2_scaffold_1142_6
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(6314..7456)
DNA (1143bp) protein (381aa)
Sarcosine oxidase (EC:1.5.3.1) Tax=RBG_16_Gemmatimonadetes_66_8_curated
Sarcosine oxidase n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EIP4_RUNSL
FAD dependent oxidoreductase
13_1_40cm_2_scaffold_1142_7
Paenibacillus macerans, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(7507..8391)
DNA (885bp) protein (295aa)
hypothetical protein n=1 Tax=Paenibacillus fonticola RepID=UPI000380DAFC
Dihydrodipicolinate synthetase family protein {ECO:0000313|EMBL:KFM95769.1}; TaxID=44252 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus ma
dihydrodipicolinate synthetase
13_1_40cm_2_scaffold_1142_8
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(8403..9176)
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9A3_GEMAT
amidohydrolase 2
Amidohydrolase 2 {ECO:0000313|EMBL:AHG91169.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_2_scaffold_1142_9
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(9176..9736)
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9A4_GEMAT
amidohydrolase 2
Amidohydrolase 2 {ECO:0000313|EMBL:AHG91170.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_2_scaffold_1142_10
unknown

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9813..9968
DNA (156bp) protein (52aa)

This feature has no annotations

13_1_40cm_2_scaffold_1142_11
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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9981..10547
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GU58_SPHAL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJA08858.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis f
13_1_40cm_2_scaffold_1142_12
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(10544..11695)
DNA (1152bp) protein (384aa)
putative aminotransferase; K01845 glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] Tax=GWC2_Gemmatimonadetes_71_10_curated
Putative aminotransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9A5_GEMAT
putative aminotransferase
13_1_40cm_2_scaffold_1142_13
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(11655..12404)
DNA (750bp) protein (250aa)
putative methyltransferase; K02533 tRNA/rRNA methyltransferase [EC:2.1.1.-] Tax=GWC2_Gemmatimonadetes_71_10_curated
Putative methyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9A6_GEMAT
tRNA/rRNA methyltransferase (SpoU)
13_1_40cm_2_scaffold_1142_14
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(12401..15181)
DNA (2781bp) protein (927aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9A7_GEMAT rbh
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
hypothetical protein
13_1_40cm_2_scaffold_1142_15
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(15175..16200)
DNA (1026bp) protein (342aa)
GHMP kinase; K07031 D-glycero-alpha-D-manno-heptose-7-phosphate kinase [EC:2.7.1.168] Tax=GWC2_Gemmatimonadetes_71_10_curated
Predicted kinase related to galactokinase and mevalonate kinase (EC:2.7.1.168)
GHMP kinase n=1 Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B6FA7D
13_1_40cm_2_scaffold_1142_16
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(16197..17669)
DNA (1473bp) protein (491aa)
Putative peptide ABC transporter substrate binding protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9A8_GEMAT
putative peptide ABC transporter substrate binding protein Tax=GWC2_Gemmatimonadetes_71_10_curated
putative peptide ABC transporter substrate binding protein
13_1_40cm_2_scaffold_1142_17
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

17716..18693
DNA (978bp) protein (326aa)
Peptide ABC transporter, permease protein n=1 Tax=Pelodictyon luteolum (strain DSM 273) RepID=Q3B2F7_PELLD
binding-protein-dependent transport systems inner membrane component; K02033 peptide/nickel transport system permease protein Tax=GWC2_Gemmatimonadetes_71_10_curated
ABC-type transporter, integral membrane subunit
13_1_40cm_2_scaffold_1142_18
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

18690..19532
DNA (843bp) protein (281aa)
Putative peptide ABC transporter permease protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9B0_GEMAT
putative peptide ABC transporter permease protein Tax=GWC2_Gemmatimonadetes_71_10_curated
ABC-type transporter, integral membrane subunit
13_1_40cm_2_scaffold_1142_19
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(19529..20167)
DNA (639bp) protein (213aa)
esterase n=1 Tax=Salisaeta longa RepID=UPI0003B39BB9
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
hypothetical protein
13_1_40cm_2_scaffold_1142_20
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(20167..21267)
DNA (1101bp) protein (367aa)
Alpha-mannosidase n=1 Tax=Deinococcus peraridilitoris (strain DSM 19664 / LMG 22246 / CIP 109416 / KR-200) RepID=K9ZVM1_DEIPD
glycoside hydrolase family 38
Glycoside hydrolase family 38 {ECO:0000313|EMBL:AHG91178.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_2_scaffold_1142_21
unknown

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21703..22203
DNA (501bp) protein (167aa)

This feature has no annotations

13_1_40cm_2_scaffold_1142_22
unknown

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22237..22458
DNA (222bp) protein (74aa)

This feature has no annotations

13_1_40cm_2_scaffold_1142_23
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(22752..24080)
DNA (1329bp) protein (443aa)
transaldolase phosphoglucose isomerase (EC:2.2.1.2 5.3.1.9); K13810 transaldolase / glucose-6-phosphate isomerase [EC:2.2.1.2 5.3.1.9] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
hypothetical protein id=14429319 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=bin3_NC10 organism_group=NC10
transaldolase
13_1_40cm_2_scaffold_1142_24
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

24129..26687
DNA (2559bp) protein (853aa)
nitrogen specific signal transduction histidine kinase NtrB (EC:2.7.13.3); K02482 two-component system, NtrC family, sensor kinase [EC:2.7.13.3] Tax=GWA2_Rokubacteria_70_23_curated
Multi-sensor hybrid histidine kinase n=1 Tax=Oscillochloris trichoides DG-6 RepID=E1IHA2_9CHLR
multi-sensor hybrid histidine kinase
13_1_40cm_2_scaffold_1142_25

Not on your lists

comp(26671..29226)
DNA (2556bp) protein (852aa)
Putative uncharacterized protein n=1 Tax=uncultured bacterium BAC-L1N9 RepID=Q4JIR1_9BACT
Putative uncharacterized protein {ECO:0000313|EMBL:AAY89251.1}; TaxID=333371 species="Bacteria; environmental samples.;" source="uncultured bacterium BAC-L1N9.;"
hypothetical protein
13_1_40cm_2_scaffold_1142_26
unknown

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comp(29230..29742)
DNA (513bp) protein (171aa)

This feature has no annotations

13_1_40cm_2_scaffold_1142_27

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comp(29739..30593)
DNA (855bp) protein (285aa)
Putative uncharacterized protein n=1 Tax=uncultured bacterium BAC-L1N9 RepID=Q4JIR2_9BACT
Putative uncharacterized protein {ECO:0000313|EMBL:AAY89250.1}; TaxID=333371 species="Bacteria; environmental samples.;" source="uncultured bacterium BAC-L1N9.;"
hypothetical protein
13_1_40cm_2_scaffold_1142_28
unknown

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comp(30593..31057)
DNA (465bp) protein (155aa)

This feature has no annotations

13_1_40cm_2_scaffold_1142_29
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(31148..31645)
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A754_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH38064.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-
13_1_40cm_2_scaffold_1142_30
unknown

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31999..32271
DNA (273bp) protein (91aa)

This feature has no annotations

Displaying items 1-30 of 50 in total

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