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13_1_40cm_2_scaffold_1193

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_1193_1
unknown

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comp(21..296)
DNA (276bp) protein (92aa)

This feature has no annotations

13_1_40cm_2_scaffold_1193_2
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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436..2076
DNA (1641bp) protein (547aa)
General secretion pathway protein A n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MKT1_9BACT
exeA; General secretion pathway protein A
General secretion pathway protein A {ECO:0000313|EMBL:CBE67730.1}; TaxID=671143 species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;
13_1_40cm_2_scaffold_1193_3
unknown

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2076..2399
DNA (324bp) protein (108aa)

This feature has no annotations

13_1_40cm_2_scaffold_1193_4
Arenimonas malthae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2399..2827
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MKT2_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KFN51610.1}; Flags: Fragment;; TaxID=1384054 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="
13_1_40cm_2_scaffold_1193_5
unknown

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2845..3153
DNA (309bp) protein (103aa)

This feature has no annotations

13_1_40cm_2_scaffold_1193_6
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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3301..3513
DNA (213bp) protein (71aa)
Dodecin n=1 Tax=Nitrosospira sp. APG3 RepID=M5DG69_9PROT
Transporter {ECO:0000313|EMBL:KIO50058.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
hypothetical protein
13_1_40cm_2_scaffold_1193_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(3517..4032)
DNA (516bp) protein (172aa)
hypothetical protein n=1 Tax=Amycolatopsis methanolica RepID=UPI00036C43EB
cupin region Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
cupin region
13_1_40cm_2_scaffold_1193_8
R_Rokubacteria_68_19, Rokubacteria, Bacteria

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4142..4555
DNA (414bp) protein (138aa)
GAF sensor hybrid histidine kinase (EC:2.7.13.3) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Putative Histidine kinase id=4726950 bin=GWC2_Methylomirabilis_70_24 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
two-component system sensory/regulatory protein
13_1_40cm_2_scaffold_1193_9
unknown

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comp(4598..4888)
DNA (291bp) protein (97aa)

This feature has no annotations

13_1_40cm_2_scaffold_1193_10
unknown

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5138..5434
DNA (297bp) protein (99aa)

This feature has no annotations

13_1_40cm_2_scaffold_1193_11
unknown

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5710..5937
DNA (228bp) protein (76aa)

This feature has no annotations

13_1_40cm_2_scaffold_1193_12
Hassallia byssoidea, Hassallia, Nostocales, Cyanobacteria, Bacteria

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5948..7042
DNA (1095bp) protein (365aa)
NADPH:quinone reductase (EC:1.6.5.5)
NADPH:quinone reductase n=1 Tax=Oscillatoria nigro-viridis PCC 7112 RepID=K9VC82_9CYAN
Alcohol dehydrogenase {ECO:0000313|EMBL:KIF37921.1}; TaxID=1304833 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Hassallia.;" source="Hassallia byssoidea VB512170.;"
13_1_40cm_2_scaffold_1193_13
unknown

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comp(7050..7214)
DNA (165bp) protein (55aa)

This feature has no annotations

13_1_40cm_2_scaffold_1193_14
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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comp(7214..7594)
DNA (381bp) protein (127aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
13_1_40cm_2_scaffold_1193_15
RBG_16_Deltaproteobacteria_49_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7792..8268
DNA (477bp) protein (159aa)
hypothetical protein Tax=RBG_16_Deltaproteobacteria_49_23_curated
Putative uncharacterized protein id=4939960 bin=GWC2_CP_Nitrospirae-rel_42_7 species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
13_1_40cm_2_scaffold_1193_16
unknown

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comp(8855..9286)
DNA (432bp) protein (144aa)

This feature has no annotations

13_1_40cm_2_scaffold_1193_17
unknown

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comp(9348..9587)
DNA (240bp) protein (80aa)

This feature has no annotations

13_1_40cm_2_scaffold_1193_18
unknown

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comp(9936..10079)
DNA (144bp) protein (48aa)

This feature has no annotations

13_1_40cm_2_scaffold_1193_19
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10325..10945)
DNA (621bp) protein (207aa)
PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TVD4_9CHLR
sensor histidine kinase Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
putative two-component sensor histidine kinase protein
13_1_40cm_2_scaffold_1193_20
BJP_08E140C01_Xanthomonadales_64_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11227..11724)
DNA (498bp) protein (166aa)
Peptidase M19 renal dipeptidase n=1 Tax=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) RepID=B1MA23_METRJ
peptidase M19
Tax=BJP_08E140C01_Xanthomonadales_64_42
13_1_40cm_2_scaffold_1193_21
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12471..13967
DNA (1497bp) protein (499aa)
Amidohydrolase n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AZJ4_RUBXD
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
hypothetical protein
13_1_40cm_2_scaffold_1193_22
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13946..15013)
DNA (1068bp) protein (356aa)
serA; D-3-phosphoglycerate dehydrogenase; K00058 D-3-phosphoglycerate dehydrogenase [EC:1.1.1.95] Tax=GWD2_Deltaproteobacteria_55_8_curated
D-3-phosphoglycerate dehydrogenase id=1940935 bin=GWD2_Deltaproteobacteria_55_8 species=Thermosynechococcus elongatus genus=Thermosynechococcus taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
D-3-phosphoglycerate dehydrogenase
13_1_40cm_2_scaffold_1193_23
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15102..15581
DNA (480bp) protein (160aa)
putative amidohydrolase Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
2-amino-3-carboxymuconate-6-semialdehyde decarboxylase id=4770810 bin=GWA2_Methylomirabilis_73_35 species=Mycobacterium xenopi genus=Mycobacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
amidohydrolase 2
Displaying 23 items

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