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13_1_40cm_2_scaffold_11053

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_11053_1
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(3..284)
DNA (282bp) protein (94aa)
folE; GTP cyclohydrolase I (EC:3.5.4.16)
GTP cyclohydrolase 1 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021192}; EC=3.5.4.16 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021179};; GTP cyclohydrolase I {ECO:0000256|
GTP cyclohydrolase 1 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6G2_GEMAT
13_1_40cm_2_scaffold_11053_2
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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323..1525
DNA (1203bp) protein (401aa)
Sodium/calcium exchanger membrane region n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CF48_THET1 id=5225356 bin=16ft_combo_ws3_JS1 species=Thermobaculum terrenum genus=Thermobaculum taxon_order=unknown taxon_class=unknown phylum=unknown tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
sodium/calcium exchanger membrane region; K07301 inner membrane protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
sodium/calcium exchanger membrane region
13_1_40cm_2_scaffold_11053_3
unknown

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1770..1901
DNA (132bp) protein (44aa)

This feature has no annotations

13_1_40cm_2_scaffold_11053_4
Schistosoma japonicum, Schistosoma, Strigeidida, Digenea, Platyhelminthes, Metazoa

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1898..2215
DNA (318bp) protein (106aa)
Cupin, RmlC-type,domain-containing protein n=1 Tax=Schistosoma japonicum RepID=C1L6U9_SCHJA
Cupin, RmlC-type,domain-containing protein {ECO:0000313|EMBL:CAX70427.1}; TaxID=6182 species="Eukaryota; Metazoa; Platyhelminthes; Trematoda; Digenea; Strigeidida; Schistosomatoidea; Schistosomatidae;
Cupin 2 conserved barrel domain protein
13_1_40cm_2_scaffold_11053_5
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(2212..2463)
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6F9_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
GCN5-related N-acetyltransferase
13_1_40cm_2_scaffold_11053_6
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(2451..3149)
DNA (699bp) protein (233aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6F9_GEMAT
GCN5-related N-acetyltransferase
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:AHG90235.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_2_scaffold_11053_7
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(3130..3588)
DNA (459bp) protein (153aa)
Exonuclease n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6F7_GEMAT
SMC domain protein
SMC domain protein {ECO:0000313|EMBL:AHG90234.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_2_scaffold_11053_8
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(3638..5509)
DNA (1872bp) protein (624aa)
Exonuclease n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6F7_GEMAT
SMC domain protein
SMC domain protein {ECO:0000313|EMBL:AHG90234.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_2_scaffold_11053_9
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(5506..6705)
DNA (1200bp) protein (400aa)
Exonuclease n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6F6_GEMAT
exonuclease Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Calcineurin-like phosphoesterase superfamily domain protein
13_1_40cm_2_scaffold_11053_10
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(6705..8513)
DNA (1809bp) protein (603aa)
Uncharacterized protein n=1 Tax=Synechococcus sp. PCC 7502 RepID=K9SRD2_9SYNE
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_40cm_2_scaffold_11053_11
RBG_16_Armatimonadetes_58_9_curated, Armatimonadetes, Bacteria

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comp(8473..9594)
DNA (1122bp) protein (374aa)
Uncharacterized protein n=1 Tax=Pseudanabaena sp. PCC 7367 RepID=K9SMX6_9CYAN
hypothetical protein Tax=RBG_16_Armatimonadetes_58_9_curated
hypothetical protein
13_1_40cm_2_scaffold_11053_12
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(9591..10229)
DNA (639bp) protein (213aa)
O-methyltransferase family protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
O-methyltransferase family protein id=1244564 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
O-methyltransferase family protein
13_1_40cm_2_scaffold_11053_13
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(10229..10744)
DNA (516bp) protein (172aa)
hypothetical protein
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
13_1_40cm_2_scaffold_11053_14
RBG_13_Aminicenantes_59_9_curated, Aminicenantes, Bacteria

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10796..11998
DNA (1203bp) protein (401aa)
peptidase M24; K01271 Xaa-Pro dipeptidase [EC:3.4.13.9] Tax=RBG_13_Aminicenantes_59_9_curated
Proline dipeptidase id=8266084 bin=CD_OP8_4m species=Indibacter alkaliphilus genus=Indibacter taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=CD_OP8_4m organism_group=OP8 (Aminicenantes)
peptidase M24
13_1_40cm_2_scaffold_11053_15
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(12493..13197)
DNA (705bp) protein (235aa)
aspC; aspartate aminotransferase (EC:2.6.1.1); K00812 aspartate aminotransferase [EC:2.6.1.1] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
aspartate aminotransferase (EC:2.6.1.1)
Aspartate aminotransferase n=1 Tax=Clostridium tetani (strain Massachusetts / E88) RepID=Q895I0_CLOTE
13_1_40cm_2_scaffold_11053_16
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(13154..13636)
DNA (483bp) protein (161aa)
aspC; aspartate aminotransferase (EC:2.6.1.1); K00812 aspartate aminotransferase [EC:2.6.1.1] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
aspC; aspartate aminotransferase (EC:2.6.1.1)
Aspartate aminotransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6F2_GEMAT
13_1_40cm_2_scaffold_11053_17
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(13633..14781)
DNA (1149bp) protein (383aa)
peptidase S58 DmpA; K01266 D-aminopeptidase [EC:3.4.11.19] Tax=GWC2_Gemmatimonadetes_71_10_curated
Peptidase S58 DmpA n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SL16_RHOMR
peptidase S58 DmpA
13_1_40cm_2_scaffold_11053_18
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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14793..15986
DNA (1194bp) protein (398aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6F1_GEMAT
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
DbpA RNA-binding domain protein
13_1_40cm_2_scaffold_11053_19
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(15994..16284)
DNA (291bp) protein (97aa)
Histone family protein DNA-binding protein n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CPI3_SIDLE
hup; DNA-binding protein Hup Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
DNA-binding protein HBsu
13_1_40cm_2_scaffold_11053_20
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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17152..18087
DNA (936bp) protein (312aa)
coaE; dephospho-CoA kinase (EC:2.7.1.24); K00859 dephospho-CoA kinase [EC:2.7.1.24] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
coaE; dephospho-CoA kinase (EC:2.7.1.24)
Dephospho-CoA kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6E7_GEMAT
13_1_40cm_2_scaffold_11053_21
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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18099..18488
DNA (390bp) protein (130aa)
Glycine cleavage system H protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6E6_GEMAT
gcvH; glycine cleavage system H protein; K02437 glycine cleavage system H protein Tax=GWC2_Gemmatimonadetes_71_10_curated
gcvH; glycine cleavage system H protein
13_1_40cm_2_scaffold_11053_22
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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18485..19165
DNA (681bp) protein (227aa)
beta-lactamase domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
UPF0173 metal-dependent hydrolase KSU1_D0187 id=2009418 bin=GWB2_Proteobacteria_55_19 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good
metal-dependent hydrolase
13_1_40cm_2_scaffold_11053_23
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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19169..22006
DNA (2838bp) protein (946aa)
gcvP; glycine dehydrogenase (EC:1.4.4.2); K00281 glycine dehydrogenase [EC:1.4.4.2] Tax=GWC2_Gemmatimonadetes_71_10_curated
Glycine dehydrogenase (decarboxylating) n=1 Tax=Oscillatoriales cyanobacterium JSC-12 RepID=K8GJB5_9CYAN
Glycine dehydrogenase [decarboxylating]
13_1_40cm_2_scaffold_11053_24
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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22014..22745
DNA (732bp) protein (244aa)
biotin/lipoate A/B protein ligase; K03800 lipoate-protein ligase A [EC:2.7.7.63] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Putative uncharacterized protein n=1 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N3W2_ANATU
hypothetical protein
13_1_40cm_2_scaffold_11053_25
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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22759..23007
DNA (249bp) protein (83aa)
ABC-type transporter, periplasmic subunit {ECO:0000313|EMBL:AHG90220.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Displaying 25 items

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