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13_1_40cm_2_scaffold_0

Search features with annotation key words

Displaying items 1-30 of 120 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_0_1
Candidatus Nitrosoarchaeum limnia, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

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1..357
DNA (357bp) protein (119aa)
Phosphate ABC transporter, inner membrane subunit PstC n=1 Tax=Candidatus Nitrosoarchaeum limnia SFB1 RepID=F3KKB1_9ARCH
pstC; phosphate transport system permease protein PstC
Phosphate ABC transporter, inner membrane subunit PstC {ECO:0000313|EMBL:EGG42278.1}; TaxID=886738 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;"
13_1_40cm_2_scaffold_0_2
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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354..1280
DNA (927bp) protein (309aa)
Phosphate transport system permease protein pstA n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AQS3_9ARCH
Phosphate transport system permease protein pstA {ECO:0000313|EMBL:CDI04987.1}; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
pstA; Phosphate transport system permease protein PstA
13_1_40cm_2_scaffold_0_3
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

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1355..2116
DNA (762bp) protein (254aa)
pstB; ABC phosphate uptake transporter, ATP-binding protein (EC:3.6.3.27) Tax=RBG_16_Thaumarchaeota_49_8_curated
pstB; ABC phosphate uptake transporter, ATP-binding protein (EC:3.6.3.27)
ABC phosphate uptake transporter, ATP-binding protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IMI6_NITGG
13_1_40cm_2_scaffold_0_4
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

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2150..2767
DNA (618bp) protein (206aa)
Phosphate-specific transport system accessory protein PhoU n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0I9B5_NITGG
phosphate uptake regulator, PhoU Tax=RBG_16_Thaumarchaeota_49_8_curated
phosphate uptake regulator, PhoU
13_1_40cm_2_scaffold_0_5
unknown

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2949..3125
DNA (177bp) protein (59aa)

This feature has no annotations

13_1_40cm_2_scaffold_0_6
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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3585..5327
DNA (1743bp) protein (581aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000375277A rbh
binding-protein-dependent transport system inner membrane protein; K02063 thiamine transport system permease protein Tax=RBG_16_Euryarchaeota_68_12_curated
Molybdenum transport system permease protein ModB
13_1_40cm_2_scaffold_0_7
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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5337..6431
DNA (1095bp) protein (365aa)
malK9; trehalose/maltose import ATP-binding protein MalK (EC:3.6.3.19)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00036ECF18
ABC transporter, ATP-binding protein Tax=RBG_16_Euryarchaeota_68_12_curated
13_1_40cm_2_scaffold_0_8
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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6437..7531
DNA (1095bp) protein (365aa)
ABC-type spermidine/putrescine transport systems, ATPase component (EC:3.6.3.31) Tax=RBG_16_Euryarchaeota_68_12_curated
ABC-type spermidine/putrescine transport systems, ATPase component (EC:3.6.3.31)
ABC-type spermidine/putrescine transport systems, ATPase component n=1 Tax=Thermoplasmatales archaeon BRNA1 RepID=M4YN61_9EURY rbh
13_1_40cm_2_scaffold_0_9
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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7572..8195
DNA (624bp) protein (208aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000382CEDA
hypothetical protein; K07220 hypothetical protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
Phosphate transport regulator
13_1_40cm_2_scaffold_0_10
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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8220..8837
DNA (618bp) protein (206aa)
Putative uncharacterized protein n=1 Tax=Methanoregula boonei (strain 6A8) RepID=A7I6C0_METB6
hypothetical protein; K07220 hypothetical protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
hypothetical protein
13_1_40cm_2_scaffold_0_11
unknown

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comp(9116..9340)
DNA (225bp) protein (75aa)

This feature has no annotations

13_1_40cm_2_scaffold_0_12
unknown

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comp(9374..10057)
DNA (684bp) protein (228aa)

This feature has no annotations

13_1_40cm_2_scaffold_0_13
unknown

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comp(10364..10612)
DNA (249bp) protein (83aa)

This feature has no annotations

13_1_40cm_2_scaffold_0_14
unknown

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comp(10633..10821)
DNA (189bp) protein (63aa)

This feature has no annotations

13_1_40cm_2_scaffold_0_15
unknown

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comp(11843..12142)
DNA (300bp) protein (100aa)

This feature has no annotations

13_1_40cm_2_scaffold_0_16
RBG_16_Archaea_50_20_curated, Archaea

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12319..13122
DNA (804bp) protein (268aa)
proliferating cell nuclear antigen PcnA; K04802 proliferating cell nuclear antigen Tax=RBG_16_Archaea_50_20_curated
pcn; proliferating cell nuclear antigen
proliferating cell nuclear antigen PcnA id=14428073 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
13_1_40cm_2_scaffold_0_17
RBG_16_Archaea_50_20_curated, Archaea

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13130..14137
DNA (1008bp) protein (336aa)
priB; DNA primase, large subunit; K02685 DNA primase large subunit [EC:2.7.7.-] Tax=RBG_16_Archaea_50_20_curated
DNA primase large subunit PriL n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8I855_METCZ
priB; DNA primase, large subunit
13_1_40cm_2_scaffold_0_18
RBG_16_Archaea_50_20_curated, Archaea

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14124..15338
DNA (1215bp) protein (405aa)
putative DNA primase, small subunit; K02683 DNA primase [EC:2.7.7.-] Tax=RBG_16_Archaea_50_20_curated
DNA primase small subunit (EC:2.7.7.-)
DNA primase small subunit PriS n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N7C9_9ARCH
13_1_40cm_2_scaffold_0_19
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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15419..15985
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AVL3_9ARCH
hypothetical protein Tax=RBG_13_Bathyarchaeota_46_16b_curated
hypothetical protein
13_1_40cm_2_scaffold_0_20
unknown

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15978..16199
DNA (222bp) protein (74aa)

This feature has no annotations

13_1_40cm_2_scaffold_0_21
RBG_16_Archaea_50_20_curated, Archaea

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16519..17310
DNA (792bp) protein (264aa)
Translation initiation factor 2 subunit alpha n=1 Tax=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) RepID=IF2A_METKA
translation initiation factor 2, subunit alpha; K03237 translation initiation factor 2 subunit 1 Tax=RBG_16_Archaea_50_20_curated
SUI2; translation initiation factor IF-2 subunit alpha
13_1_40cm_2_scaffold_0_22
RBG_16_Archaea_50_20_curated, Archaea

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comp(17477..20038)
DNA (2562bp) protein (854aa)
Putative uncharacterized protein n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N5Y4_9ARCH
hypothetical protein Tax=RBG_16_Archaea_50_20_curated
hypothetical protein
13_1_40cm_2_scaffold_0_23
unknown

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20142..20339
DNA (198bp) protein (66aa)

This feature has no annotations

13_1_40cm_2_scaffold_0_24
CG_Caldi_01, Caldisericum, Caldisericales, Caldisericia, Caldiserica, Bacteria

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comp(20631..21542)
DNA (912bp) protein (304aa)
Uncharacterized protein n=1 Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1Z0B0_METPS
nitrogenase subunit NifH (ATPase)-like protein Tax=CG_Caldi_01
hypothetical protein
13_1_40cm_2_scaffold_0_25
Paenibacillus sp. VKM B-2647, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

21880..22890
DNA (1011bp) protein (337aa)
hypothetical protein n=1 Tax=Amycolatopsis benzoatilytica RepID=UPI00035D9D1F
Uncharacterized protein {ECO:0000313|EMBL:KIL40713.1}; TaxID=1590651 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. VKM B-2647.;"
phosphoesterase
13_1_40cm_2_scaffold_0_26
GWB2_Deltaproteobacteria_55_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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23242..25176
DNA (1935bp) protein (645aa)
hypothetical protein n=1 Tax=Glaciibacter superstes RepID=UPI0003B48462
PKD domain-containing protein Tax=GWB2_Deltaproteobacteria_55_19_curated
extracellular nuclease
13_1_40cm_2_scaffold_0_27
RBG_16_Archaea_50_20_curated, Archaea

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25371..26189
DNA (819bp) protein (273aa)
arginase (EC:3.5.3.1)
Arginase n=1 Tax=Acetonema longum DSM 6540 RepID=F7NKJ1_9FIRM
arginase Tax=RBG_16_Archaea_50_20_curated
13_1_40cm_2_scaffold_0_28
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(26269..26739)
DNA (471bp) protein (157aa)
Putative uncharacterized protein n=1 Tax=Methanobacterium sp. (strain SWAN-1) RepID=F6D4G5_METSW
Putative ester cyclase {ECO:0000313|EMBL:KCZ70593.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" s
hypothetical protein
13_1_40cm_2_scaffold_0_29
R_RIF_OD1_09_54_12, RIF-OD1-9, Parcubacteria, Bacteria

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26834..28024
DNA (1191bp) protein (397aa)
Choline monooxygenase (EC:1.14.15.7)
choline monooxygenase n=1 Tax=Legionella shakespearei RepID=UPI0003700CA9
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_RIF_OD1_09_54_12_curated
13_1_40cm_2_scaffold_0_30
unknown

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28375..28551
DNA (177bp) protein (59aa)

This feature has no annotations

Displaying items 1-30 of 120 in total

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