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13_1_40cm_2_scaffold_1004

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_1004_1
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(3..215)
DNA (213bp) protein (71aa)
gyrB; DNA gyrase subunit B; K02470 DNA gyrase subunit B [EC:5.99.1.3] Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
DNA gyrase subunit B (EC:5.99.1.3)
DNA gyrase subunit B id=4563355 bin=GWA2_Ignavibacteria_55_11 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
13_1_40cm_2_scaffold_1004_2
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(222..542)
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6J6_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
protein of unknown function DUF721
13_1_40cm_2_scaffold_1004_3
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(665..1447)
DNA (783bp) protein (261aa)
enoyl-CoA hydratase (EC:4.2.1.17) Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Enoyl-CoA hydratase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6J8_GEMAT
Enoyl-CoA hydratase/isomerase
13_1_40cm_2_scaffold_1004_4
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(1556..2038)
DNA (483bp) protein (161aa)
Ig domain protein group 2 domain protein
Ig domain protein group 2 domain protein {ECO:0000313|EMBL:AHG91641.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_2_scaffold_1004_5
Desulfotomaculum hydrothermale, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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2167..3219
DNA (1053bp) protein (351aa)
Methylthioribose-1-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_01678}; Short=M1Pi {ECO:0000256|HAMAP-Rule:MF_01678};; Short=MTR-1-P isomerase {ECO:0000256|HAMAP-Rule:MF_01678};; EC=5.3.1.23 {ECO:00
Methylthioribose-1-phosphate isomerase n=1 Tax=Desulfotomaculum hydrothermale Lam5 = DSM 18033 RepID=K8DZP1_9FIRM
translation initiation factor 2B subunit
13_1_40cm_2_scaffold_1004_6

Not on your lists

3318..3686
DNA (369bp) protein (123aa)
Hypothetical conserved protein n=1 Tax=uncultured prokaryote RepID=H5SIR4_9ZZZZ
Hypothetical conserved protein {ECO:0000313|EMBL:BAL56050.1}; TaxID=198431 species="unclassified sequences; environmental samples.;" source="uncultured prokaryote.;"
Rossmann fold nucleotide-binding protein
13_1_40cm_2_scaffold_1004_7
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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3693..4097
DNA (405bp) protein (135aa)
Cytochrome c-type biogenesis protein CcmE n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6K1_GEMAT
ccmE; cytochrome c-type biogenesis protein CcmE; K02197 cytochrome c-type biogenesis protein CcmE Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
CcmE/CycJ protein
13_1_40cm_2_scaffold_1004_8
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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4098..6122
DNA (2025bp) protein (675aa)
Cytochrome c-type biogenesis protein CcmF n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6K2_GEMAT
ccmF; cytochrome c-type biogenesis protein CcmF; K02198 cytochrome c-type biogenesis protein CcmF Tax=GWC2_Gemmatimonadetes_71_10_curated
cytochrome c assembly protein
13_1_40cm_2_scaffold_1004_9
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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6470..6736
DNA (267bp) protein (89aa)
Uncharacterized protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_40cm_2_scaffold_1004_10
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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6733..7254
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6K4_GEMAT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_40cm_2_scaffold_1004_11
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

7326..8252
DNA (927bp) protein (309aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_2_scaffold_1004_12
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

8315..8800
DNA (486bp) protein (162aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_2_scaffold_1004_13
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(8801..10489)
DNA (1689bp) protein (563aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6K7_GEMAT
hypothetical protein; K01992 ABC-2 type transport system permease protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_40cm_2_scaffold_1004_14
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(10486..11262)
DNA (777bp) protein (259aa)
Putative ABC transporter ATP-binding protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6K8_GEMAT
putative ABC transporter ATP-binding protein; K01990 ABC-2 type transport system ATP-binding protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
putative ABC transporter ATP-binding protein
13_1_40cm_2_scaffold_1004_15
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(11259..12419)
DNA (1161bp) protein (387aa)
transglutaminase-like enzyme, predicted cysteine protease Tax=RBG_16_Gemmatimonadetes_66_8_curated
Transglutaminase-like protein id=3846337 bin=GWC2_Nitrospirae_57_13 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
transglutaminase domain-containing protein
13_1_40cm_2_scaffold_1004_16
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(12738..13253)
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Mycobacterium colombiense CECT 3035 RepID=J5ENK4_9MYCO
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_40cm_2_scaffold_1004_17
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(13250..13921)
DNA (672bp) protein (224aa)
TPR domain protein n=2 Tax=Arthrospira platensis RepID=D4ZXT7_ARTPN
SPY protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
TPR domain protein
13_1_40cm_2_scaffold_1004_18
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(13918..14241)
DNA (324bp) protein (108aa)
CutA1 divalent ion tolerance protein n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IQ27_ANADE
Divalent-cation tolerance protein CutA; K03926 periplasmic divalent cation tolerance protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
CutA1 divalent ion tolerance protein
13_1_40cm_2_scaffold_1004_19
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

14443..15750
DNA (1308bp) protein (436aa)
UvrABC system protein A n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6L0_GEMAT
uvrA; UvrABC system protein A; K03701 excinuclease ABC subunit A Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
UvrABC system protein A
Displaying 19 items

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