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13_1_40cm_2_scaffold_1005

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_1005_1
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

3..653
DNA (651bp) protein (217aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
13_1_40cm_2_scaffold_1005_2
unknown

Not on your lists

comp(551..1063)
DNA (513bp) protein (171aa)

This feature has no annotations

13_1_40cm_2_scaffold_1005_3
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

1147..2775
DNA (1629bp) protein (543aa)
nitrogen specific signal transduction histidine kinase NtrB (EC:2.7.13.3); K02482 two-component system, NtrC family, sensor kinase [EC:2.7.13.3] Tax=GWC2_Gemmatimonadetes_71_10_curated
Multi-sensor hybrid histidine kinase n=1 Tax=Chloroflexus aggregans (strain MD-66 / DSM 9485) RepID=B8GBT4_CHLAD
multi-sensor hybrid histidine kinase
13_1_40cm_2_scaffold_1005_4
CG_Anaero_02, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(2746..3135)
DNA (390bp) protein (130aa)
Methylated-DNA--[protein]-cysteine S-methyltransferase, TIGR00589 family n=1 Tax=Leptospira broomii serovar Hurstbridge str. 5399 RepID=T0GEN3_9LEPT
methylated-DNA--protein-cysteine methyltransferase; K07443 methylated-DNA-protein-cysteine methyltransferase related protein Tax=CG_Anaero_02
Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding protein
13_1_40cm_2_scaffold_1005_5
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(3179..3661)
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB51_GEMAT
NUDIX family hydrolase Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
NUDIX hydrolase
13_1_40cm_2_scaffold_1005_6
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(3722..5989)
DNA (2268bp) protein (756aa)
type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB Tax=GWC2_Gemmatimonadetes_71_10_curated
Type IV pilus biogenesis protein PilB id=4800457 bin=GWC2_Elusimicrobia_64_44 species=Mariprofundus ferrooxydans genus=Mariprofundus taxon_order=Mariprofundales taxon_class=Zetaproteobacteria phylum=Proteobacteria tax=GWC2_Elusimicrobia_64_44 organism_group=Elusimicrobia organism_desc=Good rbh
type II secretion system protein E
13_1_40cm_2_scaffold_1005_7
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(6113..8161)
DNA (2049bp) protein (683aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A514_GEMAT rbh
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
hypothetical protein
13_1_40cm_2_scaffold_1005_8
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

8207..8764
DNA (558bp) protein (186aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_2_scaffold_1005_9
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

8761..10266
DNA (1506bp) protein (502aa)
trpE; anthranilate synthase component I (EC:4.1.3.27); K01657 anthranilate synthase component I [EC:4.1.3.27] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Anthranilate synthase component I n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB52_GEMAT
anthranilate synthase component I
13_1_40cm_2_scaffold_1005_10
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

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comp(10380..11123)
DNA (744bp) protein (248aa)
Tax=RBG_16_Acidobacteria_68_9_curated
13_1_40cm_2_scaffold_1005_11
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

Not on your lists

comp(11313..11762)
DNA (450bp) protein (150aa)
hypothetical protein Tax=RBG_16_Acidobacteria_68_9_curated
13_1_40cm_2_scaffold_1005_12
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(12846..14678)
DNA (1833bp) protein (611aa)
glmS; glucosamine--fructose-6-phosphate aminotransferase (EC:2.6.1.16); K00820 glucosamine--fructose-6-phosphate aminotransferase (isomerizing) [EC:2.6.1.16] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_7
glmS; glucosamine--fructose-6-phosphate aminotransferase (EC:2.6.1.16)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB63_GEMAT
13_1_40cm_2_scaffold_1005_13
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(14663..16099)
DNA (1437bp) protein (479aa)
glmM; phosphoglucosamine mutase (EC:5.4.2.10); K01840 phosphomannomutase [EC:5.4.2.8] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Phosphoglucosamine mutase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB64_GEMAT
Phosphoglucosamine mutase, archaeal-related protein
13_1_40cm_2_scaffold_1005_14
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(16146..17228)
DNA (1083bp) protein (361aa)
Putative two-component response regulator n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB66_GEMAT
putative two-component response regulator Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
response regulator receiver
13_1_40cm_2_scaffold_1005_15
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

17285..18454
DNA (1170bp) protein (390aa)
metC; cystathionine beta-lyase (EC:4.4.1.8); K01758 cystathionine gamma-lyase [EC:4.4.1.1] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Cystathionine beta-lyase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB67_GEMAT
Cys/Met metabolism pyridoxal-phosphate-dependent protein
13_1_40cm_2_scaffold_1005_16
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

18562..19563
DNA (1002bp) protein (334aa)
Peptidase M48 family protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB68_GEMAT
peptidase M48 family protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
peptidase M48 family protein
13_1_40cm_2_scaffold_1005_17
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

19560..20846
DNA (1287bp) protein (429aa)
phosphoribosylamine/glycine ligase; K01945 phosphoribosylamine--glycine ligase [EC:6.3.4.13] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
phosphoribosylamine--glycine ligase (EC:6.3.4.13)
Phosphoribosylamine--glycine ligase n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MIW9_RHOM4
13_1_40cm_2_scaffold_1005_18
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

20830..21657
DNA (828bp) protein (276aa)
mutM; formamidopyrimidine-DNA glycosylase/AP lyase (EC:3.2.2.23 4.2.99.18); K10563 formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
mutM; formamidopyrimidine-DNA glycosylase/AP lyase (EC:3.2.2.23 4.2.99.18)
Formamidopyrimidine-DNA glycosylase/AP lyase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB70_GEMAT
13_1_40cm_2_scaffold_1005_19
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

21750..23264
DNA (1515bp) protein (505aa)
zinc-dependent peptidase, M16 family Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Putative peptidase id=1250270 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
zinc-dependent peptidase
13_1_40cm_2_scaffold_1005_20
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

23264..24703
DNA (1440bp) protein (480aa)
Peptidase M16 domain protein n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G7L6_GEOUR
peptidase M16 domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
peptidase M16 domain-containing protein
13_1_40cm_2_scaffold_1005_21
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(24722..25045)
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P896_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK43728.1}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
Displaying 21 items

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