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13_1_40cm_2_scaffold_127

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_127_1
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(1..1275)
DNA (1275bp) protein (425aa)
hypothetical protein; K08884 serine/threonine protein kinase, bacterial [EC:2.7.11.1] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Serine/threonine protein kinase with PASTA sensor(S) n=1 Tax=Alicyclobacillus acidocaldarius LAA1 RepID=B7DT62_9BACL
protein kinase
13_1_40cm_2_scaffold_127_2
unknown

Not on your lists

comp(1272..2945)
DNA (1674bp) protein (558aa)

This feature has no annotations

13_1_40cm_2_scaffold_127_3
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(3013..4329)
DNA (1317bp) protein (439aa)
Putative conserved protein (Some members contain a von Willebrand factor type A (VWA) domain) id=1866192 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Chloracidobacterium thermophilum genus=Candidatus Chloracidobacterium taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
protein of unknown function DUF58
13_1_40cm_2_scaffold_127_4
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(4326..5282)
DNA (957bp) protein (319aa)
ATPase; K03924 MoxR-like ATPase [EC:3.6.3.-] Tax=GWC2_Gemmatimonadetes_71_10_curated
ATPase AAA n=1 Tax=Streptomyces roseochromogenes subsp. oscitans DS 12.976 RepID=V6KBB4_STRRC
ATPase associated with various cellular activities AAA_3
13_1_40cm_2_scaffold_127_5
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(5240..6490)
DNA (1251bp) protein (417aa)
hypothetical protein
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
13_1_40cm_2_scaffold_127_6
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(6474..7100)
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S6L2_9SPHN
hypothetical protein
Tax=GWC2_Gemmatimonadetes_71_10_curated
13_1_40cm_2_scaffold_127_7
unknown

Not on your lists

comp(7118..7963)
DNA (846bp) protein (282aa)

This feature has no annotations

13_1_40cm_2_scaffold_127_8
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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8006..9829
DNA (1824bp) protein (608aa)
Integral membrane protein n=1 Tax=Pseudomonas stutzeri TS44 RepID=I4JNY0_PSEST
protein of unknown function DUF95 transmembrane
Uncharacterized protein {ECO:0000313|EMBL:AHG89993.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_2_scaffold_127_9
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(9921..10112)
DNA (192bp) protein (64aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_2_scaffold_127_10
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(10112..10396)
DNA (285bp) protein (95aa)
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
13_1_40cm_2_scaffold_127_11
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(10541..11653)
DNA (1113bp) protein (371aa)
Uncharacterized protein n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MH96_9BACT
putative membrane-associated Zn-dependent protease Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_40cm_2_scaffold_127_12
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

11791..13044
DNA (1254bp) protein (418aa)
Transcription termination factor Rho n=1 Tax=candidate division ZIXI bacterium RBG-1 RepID=T0LEU2_9BACT
rho; transcription termination factor; K03628 transcription termination factor Rho Tax=RBG_16_Gemmatimonadetes_66_8_curated
transcription termination factor Rho
13_1_40cm_2_scaffold_127_13
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

13059..13478
DNA (420bp) protein (140aa)
Holliday junction resolvase YqgF; K07447 putative holliday junction resolvase [EC:3.1.-.-] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Putative Holliday junction resolvase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A648_GEMAT
Holliday junction resolvase
13_1_40cm_2_scaffold_127_14
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

13490..14572
DNA (1083bp) protein (361aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A647_GEMAT
aminodeoxychorismate lyase
Aminodeoxychorismate lyase {ECO:0000313|EMBL:AHG90157.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_2_scaffold_127_15
Desulfovibrio sp. FW1012B, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14523..15119)
DNA (597bp) protein (199aa)
Thiamine-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826}; Short=TP synthase {ECO:0000256|HAMAP-Rule:MF_00097};; Short=TPS {ECO:0000256|HAMAP-Rule:MF_00097};; EC=2.5
Thiamine-phosphate synthase n=1 Tax=Desulfovibrio sp. FW1012B RepID=G7Q7C4_9DELT
thiE; thiamine-phosphate pyrophosphorylase
13_1_40cm_2_scaffold_127_16
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

15145..15513
DNA (369bp) protein (123aa)
chorismate mutase; K06208 chorismate mutase [EC:5.4.99.5] Tax=RBG_16_Chloroflexi_63_12_curated
Chorismate mutase n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UVT5_ROSS1
chorismate mutase
13_1_40cm_2_scaffold_127_17
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

15510..16691
DNA (1182bp) protein (394aa)
hypothetical protein; K06969 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A645_GEMAT
S-adenosylmethionine-dependent methyltransferase
13_1_40cm_2_scaffold_127_18
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

16720..17598
DNA (879bp) protein (293aa)
cation transporter n=1 Tax=Calothrix sp. PCC 7103 RepID=UPI0002FE3B55
cation diffusion facilitator family transporter Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
cation diffusion facilitator family transporter
13_1_40cm_2_scaffold_127_19
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

17592..18446
DNA (855bp) protein (285aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A642_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_40cm_2_scaffold_127_20
unknown

Not on your lists

18564..18728
DNA (165bp) protein (55aa)

This feature has no annotations

13_1_40cm_2_scaffold_127_21
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

18862..21819
DNA (2958bp) protein (986aa)
formate dehydrogenase subunit alpha; K00123 formate dehydrogenase, alpha subunit [EC:1.2.1.2] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Formate dehydrogenase, alpha subunit n=1 Tax=Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) RepID=D2PS75_KRIFD
formate dehydrogenase subunit alpha
13_1_40cm_2_scaffold_127_22
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

21848..22639
DNA (792bp) protein (264aa)
putative oxidoreductase; K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Short-chain dehydrogenase/reductase SDR n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01PN9_SOLUE
short-chain dehydrogenase/reductase SDR
13_1_40cm_2_scaffold_127_23
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

22674..23702
DNA (1029bp) protein (343aa)
threonine 3-dehydrogenase (EC:1.1.1.103); K00060 threonine 3-dehydrogenase [EC:1.1.1.103] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Threonine 3-dehydrogenase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A639_GEMAT
Alcohol dehydrogenase GroES domain protein
13_1_40cm_2_scaffold_127_24
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

24282..24851
DNA (570bp) protein (190aa)
kbl; putative 2-amino-3-ketobutyrate coenzyme A ligase (EC:2.3.1.29); K00639 glycine C-acetyltransferase [EC:2.3.1.29] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Putative 2-amino-3-ketobutyrate coenzyme A ligase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A638_GEMAT
aminotransferase class I and II
13_1_40cm_2_scaffold_127_25
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

25033..26295
DNA (1263bp) protein (421aa)
hypothetical protein
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_2_scaffold_127_26
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(26279..27391)
DNA (1113bp) protein (371aa)
Zn-dependent dipeptidase, microsomal dipeptidase {ECO:0000313|EMBL:CDM65778.1}; EC=3.4.13.19 {ECO:0000313|EMBL:CDM65778.1};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4;
membrane dipeptidase n=1 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B6F708
M19 family peptidase
13_1_40cm_2_scaffold_127_27
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(27376..27960)
DNA (585bp) protein (195aa)
mgh; 3-methyladenine DNA glycosylase (EC:3.2.2.-); K03652 DNA-3-methyladenine glycosylase [EC:3.2.2.21] Tax=RBG_16_Gemmatimonadetes_66_8_curated
mgh; 3-methyladenine DNA glycosylase (EC:3.2.2.-)
Putative 3-methyladenine DNA glycosylase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A637_GEMAT
13_1_40cm_2_scaffold_127_28
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(27957..29798)
DNA (1842bp) protein (614aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A636_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
NYN domain, limkain-b1-type
13_1_40cm_2_scaffold_127_29
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(29795..31363)
DNA (1569bp) protein (523aa)
long-chain fatty-acid-CoA ligase (EC:6.2.1.3); K00666 fatty-acyl-CoA synthase [EC:6.2.1.-] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Long-chain fatty-acid-CoA ligase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A635_GEMAT rbh
AMP-dependent synthetase and ligase
13_1_40cm_2_scaffold_127_30
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

31506..31886
DNA (381bp) protein (127aa)
Transcriptional regulator, GntR family n=1 Tax=Alicyclobacillus acidocaldarius (strain Tc-4-1) RepID=F8IGU3_ALIAT
putative transcriptional regulator Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
GntR family transcriptional regulator
Displaying items 1-30 of 33 in total

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