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13_1_40cm_2_scaffold_12806

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_12806_1
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..348
DNA (348bp) protein (116aa)
membrane protein n=1 Tax=Sphingobium yanoikuyae RepID=UPI000262C662
Membrane protein {ECO:0000313|EMBL:KFD26013.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (
hypothetical protein
13_1_40cm_2_scaffold_12806_2
Paenibacillus sabinae, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

486..1694
DNA (1209bp) protein (403aa)
General stress protein 69 n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JID4_HYPSM rbh
aldo/keto reductase
Aldo/keto reductase {ECO:0000313|EMBL:AHV96958.1}; TaxID=1268072 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sabinae T27.;"
13_1_40cm_2_scaffold_12806_3
unknown

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1691..1981
DNA (291bp) protein (97aa)

This feature has no annotations

13_1_40cm_2_scaffold_12806_4
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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2180..2563
DNA (384bp) protein (128aa)
id=14626280 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
Tax=CSP1_6_Rokubacteria
13_1_40cm_2_scaffold_12806_5
unknown

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2925..3218
DNA (294bp) protein (98aa)

This feature has no annotations

13_1_40cm_2_scaffold_12806_6
unknown

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comp(3600..3860)
DNA (261bp) protein (87aa)

This feature has no annotations

13_1_40cm_2_scaffold_12806_7
unknown

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comp(3922..4278)
DNA (357bp) protein (119aa)

This feature has no annotations

13_1_40cm_2_scaffold_12806_8
unknown

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comp(4344..4490)
DNA (147bp) protein (49aa)

This feature has no annotations

13_1_40cm_2_scaffold_12806_9
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

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comp(4950..5699)
DNA (750bp) protein (250aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U856_9CHLR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EFH80067.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Kte
dehydrogenase
13_1_40cm_2_scaffold_12806_10
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5939..7375)
DNA (1437bp) protein (479aa)
40-residue yvtn family beta-propeller repeat-containing protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W7E1_9GAMM
40-residue yvtn family beta-propeller repeat-containing protein {ECO:0000313|EMBL:EIL95382.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae;
nitrous oxide reductase N-terminal domain-containing protein
13_1_40cm_2_scaffold_12806_11
Sphingobium sp. Ant17, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7378..7701)
DNA (324bp) protein (108aa)
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI00035C5A99
Uncharacterized protein {ECO:0000313|EMBL:EXS70709.1}; TaxID=1461752 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp.
hypothetical protein
13_1_40cm_2_scaffold_12806_12
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7836..8579)
DNA (744bp) protein (248aa)
fabG12; short chain dehydrogenase (EC:1.1.1.100)
Uncharacterized protein n=1 Tax=Rhizobium sp. CF142 RepID=J2KVV9_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EJJ24924.1}; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" sour
13_1_40cm_2_scaffold_12806_13
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8576..8893)
DNA (318bp) protein (106aa)
Mlr3986 protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98F14_RHILO
hypothetical protein
Mlr3986 protein {ECO:0000313|EMBL:BAB50753.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAF
13_1_40cm_2_scaffold_12806_14
unknown

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comp(8984..9196)
DNA (213bp) protein (71aa)

This feature has no annotations

13_1_40cm_2_scaffold_12806_15
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(9292..9609)
DNA (318bp) protein (106aa)
Sigma-70 factor, ECF subfamily n=2 Tax=Pseudomonas aeruginosa RepID=K1CN80_PSEAI
putative RNA polymerase ECF-type sigma factor containing TPR repeat; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
RNA polymerase subunit sigma-24
13_1_40cm_2_scaffold_12806_16
Myxococcus stipitatus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9703..10062)
DNA (360bp) protein (120aa)
DGPF domain-containing protein n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UFD5_MYXSD
DGPF domain-containing protein
DGPF domain-containing protein {ECO:0000313|EMBL:AGC46575.1}; TaxID=1278073 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source=
13_1_40cm_2_scaffold_12806_17
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(10091..10621)
DNA (531bp) protein (177aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C3CDE
hypothetical protein Tax=RBG_16_Acidobacteria_70_10_curated
hypothetical protein
13_1_40cm_2_scaffold_12806_18
Mycobacterium aromaticivorans, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11260..12003
DNA (744bp) protein (248aa)
short-chain dehydrogenase n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B5C350
Short-chain dehydrogenase {ECO:0000313|EMBL:KDE99166.1}; TaxID=1440774 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium aromaticivorans JS
short-chain dehydrogenase of unknown substrate specificity
13_1_40cm_2_scaffold_12806_19
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

12241..13581
DNA (1341bp) protein (447aa)
DNA primase small subunit Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
DNA primase small subunit id=4718007 bin=GWC2_Chloroflexi_73_18 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
DNA primase small subunit
13_1_40cm_2_scaffold_12806_20
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13509..13760)
DNA (252bp) protein (84aa)
ATP dependent DNA ligase n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HHM0_ANADF
ligC; ATP-dependent DNA ligase
ATP dependent DNA ligase {ECO:0000313|EMBL:ABS28216.1}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;"
Displaying 20 items

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