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13_1_40cm_2_scaffold_1111

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_1111_1
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

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218..1198
DNA (981bp) protein (327aa)
Xylose isomerase domain protein TIM barrel n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TTA3_9CHLR
Xylose isomerase domain protein TIM barrel {ECO:0000313|EMBL:EFH83654.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="
Sugar phosphate isomerases/epimerases
13_1_40cm_2_scaffold_1111_2
Nocardioides luteus, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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1468..2649
DNA (1182bp) protein (394aa)
hypothetical protein n=1 Tax=Salinispora arenicola RepID=UPI000381A3D0 rbh
Cytochrome P450 {ECO:0000313|EMBL:KJR12693.1}; TaxID=1844 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides luteus.;"
ferredoxin
13_1_40cm_2_scaffold_1111_3
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria

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2677..2967
DNA (291bp) protein (97aa)
Rieske n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L4X4_THERP
rieske
Rieske {ECO:0000313|EMBL:ACM07109.1}; TaxID=309801 species="Bacteria; Chloroflexi; Thermomicrobiales; Thermomicrobiaceae; Thermomicrobium.;" source="Thermomicrobium roseum (strain ATCC 27502 / DSM 515
13_1_40cm_2_scaffold_1111_4
Methylobacterium sp. 4-46, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3234..3992)
DNA (759bp) protein (253aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UNS9_METS4
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ACA17184.1}; TaxID=426117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source
13_1_40cm_2_scaffold_1111_5
Arthrobacter sp. MWB30, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(4034..4336)
DNA (303bp) protein (101aa)
thermoresistant glucokinase family carbohydrate kinase (EC:2.7.1.12)
Shikimate kinase {ECO:0000313|EMBL:KIA72570.1}; EC=2.7.4.14 {ECO:0000313|EMBL:KIA72570.1};; TaxID=1534409 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arth
Carbohydrate kinase, thermoresistant glucokinase family n=1 Tax=Frankia sp. CN3 RepID=G6HH72_9ACTO
13_1_40cm_2_scaffold_1111_6
RBG_13_Chloroflexi_50_21_curated, Chloroflexi, Bacteria

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4679..6052
DNA (1374bp) protein (458aa)
FAD linked oxidase domain-containing protein; K00104 glycolate oxidase [EC:1.1.3.15] Tax=RBG_13_Chloroflexi_50_21_curated
FAD linked oxidase domain protein id=1895666 bin=GWB2_Chloroflexi_54_36 species=Thermobaculum terrenum genus=Thermobaculum taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
FAD linked oxidase domain-containing protein
13_1_40cm_2_scaffold_1111_7
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

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comp(6205..7269)
DNA (1065bp) protein (355aa)
tartrate dehydrogenase (EC:4.1.1.73)
Tartrate dehydrogenase {ECO:0000313|EMBL:ACZ40918.1}; EC=4.1.1.73 {ECO:0000313|EMBL:ACZ40918.1};; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae;
Tartrate dehydrogenase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1CAS5_SPHTD rbh
13_1_40cm_2_scaffold_1111_8
Cellulomonas cellasea, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(7276..8088)
DNA (813bp) protein (271aa)
Methyltransferase type 11 n=1 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UBK5_CELFN rbh
Methyltransferase type 11 {ECO:0000313|EMBL:KGM01744.1}; TaxID=1408250 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas cellasea DSM 20118.;"
type 11 methyltransferase
13_1_40cm_2_scaffold_1111_9
Mycobacterium smegmatis, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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8112..8504
DNA (393bp) protein (131aa)
PPOX class probable F420-dependent enzyme n=1 Tax=Mycobacterium smegmatis JS623 RepID=L0INZ3_MYCSM
PPOX class probable F420-dependent enzyme
PPOX class probable F420-dependent enzyme {ECO:0000313|EMBL:AGB20583.1}; TaxID=710686 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium sme
13_1_40cm_2_scaffold_1111_10
Halanaerobium hydrogeniformans, Halanaerobium, Halanaerobiales, Clostridia, Firmicutes, Bacteria

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comp(8501..9826)
DNA (1326bp) protein (442aa)
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI00036B2BD6
SAF domain-containing protein
SAF domain protein {ECO:0000313|EMBL:ADQ15706.1}; TaxID=656519 species="Bacteria; Firmicutes; Clostridia; Halanaerobiales; Halanaerobiaceae; Halanaerobium.;" source="Halanaerobium hydrogeniformans (Ha
13_1_40cm_2_scaffold_1111_11
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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9934..11289
DNA (1356bp) protein (452aa)
Putative sugar uptake ABC transporter periplasmic solute-binding protein id=2228895 bin=GWA2_Methylomirabilis_73_35 species=alpha proteobacterium BAL199 genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein; K02027 multiple sugar transport system substrate-binding protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
13_1_40cm_2_scaffold_1111_12
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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11315..12190
DNA (876bp) protein (292aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7DMD8_BRAJP
ABC transporter permease {ECO:0000313|EMBL:KGT73303.1}; TaxID=375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japon
hypothetical protein
13_1_40cm_2_scaffold_1111_13
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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12191..13081
DNA (891bp) protein (297aa)
Inner membrane ABC transporter permease protein ycjP n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L0R5_THERP
Sugar ABC transporter permease {ECO:0000313|EMBL:ETX02896.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY
inner membrane ABC transporter permease YcjP
13_1_40cm_2_scaffold_1111_14
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13191..14249
DNA (1059bp) protein (353aa)
ABC-type sugar/spermidine/putrescine/iron/thiamine transport systems, ATPase component n=2 Tax=Caldanaerobacter subterraneus RepID=Q8R8L6_THETN
Sugar ABC transporter ATP-binding protein {ECO:0000313|EMBL:KGG80247.1}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaer
MalK; ABC-type sugar/spermidine/putrescine/iron/thiamine transport systems, ATPase component
13_1_40cm_2_scaffold_1111_15
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria

Not on your lists

comp(14259..14876)
DNA (618bp) protein (206aa)
putative transferase protein n=1 Tax=Saccharopolyspora spinosa RepID=UPI0002378890
putative transferase protein
Probable transferase protein {ECO:0000313|EMBL:ACM06204.1}; TaxID=309801 species="Bacteria; Chloroflexi; Thermomicrobiales; Thermomicrobiaceae; Thermomicrobium.;" source="Thermomicrobium roseum (strai
13_1_40cm_2_scaffold_1111_16
Saccharopolyspora rectivirgula, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14932..15711)
DNA (780bp) protein (260aa)
2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase (EC:4.1.2.20)
2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase n=2 Tax=Saccharopolyspora erythraea RepID=A4F7L7_SACEN
Uncharacterized protein {ECO:0000313|EMBL:KEI43409.1}; TaxID=28042 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora rectivirgula
13_1_40cm_2_scaffold_1111_17
Saccharopolyspora erythraea, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15708..16685)
DNA (978bp) protein (326aa)
serA; D-3-phosphoglycerate dehydrogenase (EC:1.1.1.95)
D-3-phosphoglycerate dehydrogenase n=3 Tax=Saccharopolyspora erythraea RepID=A4FIJ9_SACEN
2-hydroxyacid dehydrogenase {ECO:0000313|EMBL:EQD87852.1}; TaxID=1382595 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora erythr
13_1_40cm_2_scaffold_1111_18
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16720..17478
DNA (759bp) protein (253aa)
Short-chain dehydrogenase n=1 Tax=Oceanibaculum indicum P24 RepID=K2JMB8_9PROT
short-chain alcohol dehydrogenase Tax=RBG_16_Betaproteobacteria_64_18_curated
short-chain alcohol dehydrogenase
13_1_40cm_2_scaffold_1111_19
Saccharopolyspora erythraea, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17544..18710
DNA (1167bp) protein (389aa)
L-carnitine dehydratase/bile acid-inducible protein F (EC:2.8.3.16)
L-carnitine dehydratase/bile acid-inducible protein F {ECO:0000313|EMBL:CAM03012.1}; EC=2.8.3.16 {ECO:0000313|EMBL:CAM03012.1};; TaxID=405948 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseu
L-carnitine dehydratase/bile acid-inducible protein F n=2 Tax=Saccharopolyspora erythraea RepID=A4FG37_SACEN
13_1_40cm_2_scaffold_1111_20
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18707..19141
DNA (435bp) protein (145aa)
Enoyl-CoA hydratase {ECO:0000313|EMBL:EWY37238.1}; EC=4.2.1.17 {ECO:0000313|EMBL:EWY37238.1};; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae
enoyl-CoA hydratase (EC:4.2.1.17)
Bll6036 protein n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89HF5_BRADU
13_1_40cm_2_scaffold_1111_21
Bradyrhizobium sp. BTAi1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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19144..19473
DNA (330bp) protein (110aa)
enoyl-CoA hydratase (EC:4.2.1.17)
Putative Enoyl-CoA hydratase {ECO:0000313|EMBL:ABQ37679.1}; EC=4.2.1.- {ECO:0000313|EMBL:ABQ37679.1};; TaxID=288000 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiace
Putative Enoyl-CoA hydratase n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5END5_BRASB
13_1_40cm_2_scaffold_1111_22
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20016..20285
DNA (270bp) protein (90aa)
hypothetical protein n=1 Tax=Clostridium beijerinckii RepID=UPI0003006E20
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR33054.1}; TaxID=290402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (strain AT
13_1_40cm_2_scaffold_1111_23
unknown

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20570..21139
DNA (570bp) protein (190aa)

This feature has no annotations

13_1_40cm_2_scaffold_1111_24
unknown

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21360..21923
DNA (564bp) protein (188aa)

This feature has no annotations

13_1_40cm_2_scaffold_1111_25
unknown

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comp(22011..22406)
DNA (396bp) protein (132aa)

This feature has no annotations

Displaying 25 items

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