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13_1_40cm_2_scaffold_1379

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_1379_1
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(3..404)
DNA (402bp) protein (134aa)
asnS; asparaginyl-tRNA synthetase (EC:6.1.1.22); K01893 asparaginyl-tRNA synthetase [EC:6.1.1.22] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Asparagine--tRNA ligase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8C9_GEMAT
Asparaginyl-tRNA synthetase
13_1_40cm_2_scaffold_1379_2
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

420..1520
DNA (1101bp) protein (367aa)
PKD domain containing protein n=1 Tax=Methanolinea tarda NOBI-1 RepID=G6FM06_9EURY
serine/threonine protein kinase Tax=GWC2_Gemmatimonadetes_71_10_curated
cell surface protein/lipoprotein
13_1_40cm_2_scaffold_1379_3
unknown

Not on your lists

1517..2014
DNA (498bp) protein (166aa)

This feature has no annotations

13_1_40cm_2_scaffold_1379_4
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(2011..4074)
DNA (2064bp) protein (688aa)
recG; ATP-dependent DNA helicase RecG (EC:3.6.1.-); K03655 ATP-dependent DNA helicase RecG [EC:3.6.4.12] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
ATP-dependent DNA helicase RecG n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8C5_GEMAT
ATP-dependent DNA helicase RecG
13_1_40cm_2_scaffold_1379_5
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(4071..4997)
DNA (927bp) protein (309aa)
Signal recognition particle receptor FtsY n=1 Tax=Thermacetogenium phaeum (strain ATCC BAA-254 / DSM 12270 / PB) RepID=K4LGZ7_THEPS
ftsY; cell division protein FtsY; K03110 fused signal recognition particle receptor Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
ftsY; cell division protein FtsY
13_1_40cm_2_scaffold_1379_6
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(4997..6766)
DNA (1770bp) protein (590aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG90619.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_2_scaffold_1379_7
Symbiobacterium thermophilum, Symbiobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6754..7464)
DNA (711bp) protein (237aa)
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase {ECO:0000255|HAMAP-Rule:MF_01014}; EC=5.3.1.16 {ECO:0000255|HAMAP-Rule:MF_01014};; Phosphoribosylform
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=2 Tax=Symbiobacterium thermophilum RepID=HIS4_SYMTH
phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase
13_1_40cm_2_scaffold_1379_8
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(7480..8772)
DNA (1293bp) protein (431aa)
Peptidase M23B family protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8C2_GEMAT
peptidase M23B family protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
peptidase M23B family protein
13_1_40cm_2_scaffold_1379_9
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(8772..9932)
DNA (1161bp) protein (387aa)
Cell division protein FtsZ n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8C1_GEMAT
ftsZ; cell division protein FtsZ; K03531 cell division protein FtsZ Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
cell division protein FtsZ
13_1_40cm_2_scaffold_1379_10
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(9955..10992)
DNA (1038bp) protein (346aa)
Cell division protein ftsA n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8B3_GEMAT
ftsA; cell division protein FtsA; K03590 cell division protein FtsA Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
cell division protein FtsA
13_1_40cm_2_scaffold_1379_11
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(11810..13216)
DNA (1407bp) protein (469aa)
murC; UDP-N-acetylmuramate--L-alanine ligase (EC:6.3.2.8); K01924 UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
UDP-N-acetylmuramate--L-alanine ligase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8B1_GEMAT rbh
UDP-N-acetylmuramate--L-alanine ligase
13_1_40cm_2_scaffold_1379_12
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(13268..14311)
DNA (1044bp) protein (348aa)
murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC:2.4.1.227); K02563 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8B0_GEMAT
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase
13_1_40cm_2_scaffold_1379_13
unknown

Not on your lists

14510..14749
DNA (240bp) protein (80aa)

This feature has no annotations

13_1_40cm_2_scaffold_1379_14
unknown

Not on your lists

14819..15337
DNA (519bp) protein (173aa)

This feature has no annotations

13_1_40cm_2_scaffold_1379_15
unknown

Not on your lists

15322..15555
DNA (234bp) protein (78aa)

This feature has no annotations

13_1_40cm_2_scaffold_1379_16
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(15558..16916)
DNA (1359bp) protein (453aa)
murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC:6.3.2.9); K01925 UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] Tax=GWC2_Gemmatimonadetes_71_10_curated
UDP-N-acetylmuramoylalanine--D-glutamate ligase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8A8_GEMAT
UDP-N-acetylmuramoylalanine--D-glutamate ligase
13_1_40cm_2_scaffold_1379_17
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(16913..18031)
DNA (1119bp) protein (373aa)
mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase (EC:2.7.8.13); K01000 phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase (EC:2.7.8.13)
Phospho-N-acetylmuramoyl-pentapeptide-transferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=MRAY_GEMAT
13_1_40cm_2_scaffold_1379_18
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(18055..19395)
DNA (1341bp) protein (447aa)
murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase (EC:6.3.2.10); K01929 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8A6_GEMAT
UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate/D-alanyl-D-alanyl ligase
13_1_40cm_2_scaffold_1379_19
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(19392..20849)
DNA (1458bp) protein (486aa)
murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC:6.3.2.13); K01928 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] Tax=GWC2_Gemmatimonad
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8A5_GEMAT
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
13_1_40cm_2_scaffold_1379_20
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(20846..22822)
DNA (1977bp) protein (659aa)
ftsI; cell division protein FtsI (EC:2.4.1.129); K03587 cell division protein FtsI (penicillin-binding protein 3) [EC:2.4.1.129] Tax=GWC2_Gemmatimonadetes_71_10_curated
Cell division protein FtsI n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8A4_GEMAT
penicillin-binding protein transpeptidase
13_1_40cm_2_scaffold_1379_21
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(22827..23129)
DNA (303bp) protein (101aa)
cell division protein FtsL family protein
Cell division protein FtsL family protein Tax=GWC2_Gemmatimonadetes_71_10_curated
13_1_40cm_2_scaffold_1379_22
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(23113..23997)
DNA (885bp) protein (295aa)
Ribosomal RNA small subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000256|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_0100
Ribosomal RNA small subunit methyltransferase H n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=RSMH_GEMAT
Ribosomal RNA small subunit methyltransferase H
13_1_40cm_2_scaffold_1379_trna_2
unknown

Not on your lists

comp(24123..24196)
DNA (74bp)
transferRNA
13_1_40cm_2_scaffold_1379_23
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(24245..26047)
DNA (1803bp) protein (601aa)
hypothetical protein
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_2_scaffold_1379_trna_1
unknown

Not on your lists

comp(26083..26156)
DNA (74bp)
transferRNA
13_1_40cm_2_scaffold_1379_24
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(26175..26360)
DNA (186bp) protein (62aa)
Tax=GWC2_Gemmatimonadetes_71_10_curated
13_1_40cm_2_scaffold_1379_25
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(26395..27216)
DNA (822bp) protein (274aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A899_GEMAT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_40cm_2_scaffold_1379_26
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(27267..28133)
DNA (867bp) protein (289aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A898_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_40cm_2_scaffold_1379_27
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(28133..28606)
DNA (474bp) protein (158aa)
CheW protein n=1 Tax=Desulfovibrio desulfuricans ND132 RepID=F0JEU3_DESDE
cheW2; chemotaxis protein Chew Tax=GWC2_Gemmatimonadetes_71_10_curated
CheW protein
Displaying 29 items

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