ggKbase home page

13_1_40cm_2_scaffold_1404

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_1404_1
Rhizobium grahamii, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..676
DNA (675bp) protein (225aa)
Uncharacterized protein n=1 Tax=Rhizobium grahamii CCGE 502 RepID=S3IP44_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EPF00379.1}; TaxID=990285 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" sourc
LssY family domain-containing protein
13_1_40cm_2_scaffold_1404_2
unknown

Not on your lists

673..1479
DNA (807bp) protein (269aa)

This feature has no annotations

13_1_40cm_2_scaffold_1404_3
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

1480..1842
DNA (363bp) protein (121aa)
ArsC family protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3K3_GEMAT
ArsC family protein Tax=GWC2_Gemmatimonadetes_71_10_curated
arsenate reductase like protein
13_1_40cm_2_scaffold_1404_4
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

Not on your lists

1875..2318
DNA (444bp) protein (148aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00036BD010
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEP13478.1}; TaxID=981222 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" source="Chloracidobacterium thermophilum (stra
13_1_40cm_2_scaffold_1404_5
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

2315..2833
DNA (519bp) protein (173aa)
hypothetical protein n=1 Tax=Paenibacillus terrigena RepID=UPI00037B25B4
DinB-like domain protein
DinB-like domain protein {ECO:0000313|EMBL:AHG92013.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_2_scaffold_1404_6
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

2830..3237
DNA (408bp) protein (136aa)
Acyl dehydratase n=1 Tax=Haloferax elongans ATCC BAA-1513 RepID=M0HS93_9EURY
MaoC domain protein dehydratase
MaoC domain protein dehydratase {ECO:0000313|EMBL:AHG88199.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_2_scaffold_1404_7
Rhodopirellula sp. SWK7, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(3245..3784)
DNA (540bp) protein (180aa)
UbiA prenyltransferase n=1 Tax=Rhodopirellula sp. SWK7 RepID=M5TAW6_9PLAN
UbiA prenyltransferase {ECO:0000313|EMBL:EMI42666.1}; TaxID=595460 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula sp.
1,4-dihydroxy-2-naphthoate octaprenyltransferase
13_1_40cm_2_scaffold_1404_8
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(4043..5935)
DNA (1893bp) protein (631aa)
ABC transporter related protein n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WSK5_PSEUU rbh
ABC transporter-like protein; K06147 ATP-binding cassette, subfamily B, bacterial Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
ABC transporter
13_1_40cm_2_scaffold_1404_9
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

5977..7662
DNA (1686bp) protein (562aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5I6_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_40cm_2_scaffold_1404_10
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

7659..8912
DNA (1254bp) protein (418aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein id=14627544 bin=bin7_NC10_sister species=unknown genus=Acidobacterium taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
13_1_40cm_2_scaffold_1404_11
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(8902..9453)
DNA (552bp) protein (184aa)
DSBA oxidoreductase n=1 Tax=Fischerella sp. PCC 9339 RepID=UPI0002FB0CEE
protein-disulfide isomerase
Protein-disulfide isomerase {ECO:0000313|EMBL:AIF83220.1}; TaxID=1459636 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus
13_1_40cm_2_scaffold_1404_12
Natrialba aegyptia, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9450..9953)
DNA (504bp) protein (168aa)
Peroxiredoxin n=1 Tax=Natrialba aegyptia DSM 13077 RepID=M0AK78_9EURY
Peroxiredoxin {ECO:0000313|EMBL:ELY98771.1}; TaxID=1227491 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba aegyptia DSM 13077.;"
AhpC/TSA family protein
13_1_40cm_2_scaffold_1404_13
RLO_PLX_64_10, Bacteria

Not on your lists

comp(9968..11005)
DNA (1038bp) protein (346aa)
serine protease; K01362 [EC:3.4.21.-] Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
HtrA2 peptidase (EC:3.4.21.108)
Protease id=1250725 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
13_1_40cm_2_scaffold_1404_14
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

11088..11801
DNA (714bp) protein (238aa)
short-chain dehydrogenase/reductase SDR; K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Short-chain dehydrogenase/reductase SDR n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XRK3_9BACT
hypothetical protein
13_1_40cm_2_scaffold_1404_15
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

11934..13859
DNA (1926bp) protein (642aa)
PAS sensor protein n=1 Tax=Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl) RepID=A9W9X5_CHLAA
multi-sensor hybrid histidine kinase Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PAS sensor protein
13_1_40cm_2_scaffold_1404_16
unknown

Not on your lists

comp(13868..14086)
DNA (219bp) protein (73aa)

This feature has no annotations

13_1_40cm_2_scaffold_1404_17
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

14215..14724
DNA (510bp) protein (170aa)
GCN5-related N-acetyltransferase n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NQ83_ROSCS
N-acetyltransferase GCN5 Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
N-acetyltransferase GCN5
13_1_40cm_2_scaffold_1404_18
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14721..15098
DNA (378bp) protein (126aa)
hypothetical protein Tax=RBG_16_Betaproteobacteria_58_11_curated
hypothetical protein id=14633185 bin=bin9_gal15 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin9_gal15 organism_group=GAL15
hypothetical protein
13_1_40cm_2_scaffold_1404_19
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

15095..17917
DNA (2823bp) protein (941aa)
aconitate hydratase 1; K01681 aconitate hydratase 1 [EC:4.2.1.3] Tax=GWC2_Gemmatimonadetes_71_10_curated
Aconitate hydratase 1 n=3 Tax=Chloroflexus RepID=A9WHM1_CHLAA
aconitate hydratase 1
13_1_40cm_2_scaffold_1404_20
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

18107..18907
DNA (801bp) protein (267aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01YF3_SOLUE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ85312.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatu
13_1_40cm_2_scaffold_1404_21
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

18929..19147
DNA (219bp) protein (73aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IRI9_KORVE
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_40cm_2_scaffold_1404_22
unknown

Not on your lists

comp(19161..19232)
DNA (72bp) protein (24aa)

This feature has no annotations

Displaying 22 items

View Taxonomy