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13_1_40cm_2_scaffold_1472

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_1472_1
unknown

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2..223
DNA (222bp) protein (74aa)

This feature has no annotations

13_1_40cm_2_scaffold_1472_2
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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302..1441
DNA (1140bp) protein (380aa)
Two-component histidine kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABF8_GEMAT
two-component histidine kinase Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
two-component histidine kinase
13_1_40cm_2_scaffold_1472_3
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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1438..2796
DNA (1359bp) protein (453aa)
Two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2INN6_ANADE
two component, sigma54 specific, Fis family transcriptional regulator; K07714 two-component system, NtrC family, response regulator AtoC Tax=RBG_16_Gemmatimonadetes_66_8_curated
two component sigma54 specific Fis family transcriptional regulator
13_1_40cm_2_scaffold_1472_4
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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2925..3374
DNA (450bp) protein (150aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_2_scaffold_1472_5
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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3371..3760
DNA (390bp) protein (130aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_2_scaffold_1472_6
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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3742..4662
DNA (921bp) protein (307aa)
Type II secretory pathway component PulJ-like protein n=1 Tax=uncultured bacterium RepID=K1YE03_9BACT
hypothetical protein
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_2_scaffold_1472_7
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

4696..5859
DNA (1164bp) protein (388aa)
hypothetical protein
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_2_scaffold_1472_8
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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5993..7045
DNA (1053bp) protein (351aa)
Putative type IV pilus assembly protein PilM n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABF4_GEMAT
pilM; putative type IV pilus assembly protein PilM; K02662 type IV pilus assembly protein PilM Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
pilM; putative type IV pilus assembly protein PilM
13_1_40cm_2_scaffold_1472_9
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

7042..7752
DNA (711bp) protein (237aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABF3_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_40cm_2_scaffold_1472_10
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

7762..8400
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABF2_GEMAT
hypothetical protein; K02664 type IV pilus assembly protein PilO Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_40cm_2_scaffold_1472_11
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

8387..8809
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABF1_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_40cm_2_scaffold_1472_12
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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8806..10731
DNA (1926bp) protein (642aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABF0_GEMAT
Type II and III secretion system protein {ECO:0000313|EMBL:AHG91513.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
type II and III secretion system protein
13_1_40cm_2_scaffold_1472_13
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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10760..13348
DNA (2589bp) protein (863aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_40cm_2_scaffold_1472_14
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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13474..14664
DNA (1191bp) protein (397aa)
aroC; chorismate synthase (EC:4.2.3.5); K01736 chorismate synthase [EC:4.2.3.5] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
aroC; chorismate synthase (EC:4.2.3.5)
Chorismate synthase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABE8_GEMAT
13_1_40cm_2_scaffold_1472_15
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

14661..15179
DNA (519bp) protein (173aa)
aroK; shikimate kinase (EC:2.7.1.71); K00891 shikimate kinase [EC:2.7.1.71] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
aroK; shikimate kinase (EC:2.7.1.71)
Shikimate kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABE7_GEMAT
13_1_40cm_2_scaffold_1472_16
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

15215..17614
DNA (2400bp) protein (800aa)
topA; DNA topoisomerase I (EC:5.99.1.2); K03168 DNA topoisomerase I [EC:5.99.1.2] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
topA; DNA topoisomerase I (EC:5.99.1.2)
DNA topoisomerase 1 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABE5_GEMAT
13_1_40cm_2_scaffold_1472_17
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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17641..18996
DNA (1356bp) protein (452aa)
gid; tRNA uridine 5-carboxymethylaminomethyl modification enzyme Gid; K04094 methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_
Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABE4_GEMAT
Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase trmFO
13_1_40cm_2_scaffold_1472_18
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

18993..19874
DNA (882bp) protein (294aa)
Tyrosine recombinase XerC n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABE3_GEMAT
xerC; tyrosine recombinase XerC; K03733 integrase/recombinase XerC Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Tyrosine recombinase xerC
13_1_40cm_2_scaffold_1472_19
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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19882..20418
DNA (537bp) protein (179aa)
ATP-dependent protease subunit HslV {ECO:0000256|HAMAP-Rule:MF_00248, ECO:0000256|SAAS:SAAS00019556}; EC=3.4.25.2 {ECO:0000256|HAMAP-Rule:MF_00248, ECO:0000256|SAAS:SAAS00019493};; TaxID=861299 specie
ATP-dependent protease subunit HslV n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=HSLV_GEMAT
ATP-dependent protease hslV
13_1_40cm_2_scaffold_1472_20
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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20419..21261
DNA (843bp) protein (281aa)
ATP-dependent protease n=1 Tax=Salisaeta longa RepID=UPI0003B346A9
ATP-dependent hsl protease ATP-binding subunit hslU; K03667 ATP-dependent HslUV protease ATP-binding subunit HslU Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
ATP-dependent hsl protease ATP-binding subunit hslU
Displaying 20 items

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