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13_1_40cm_2_scaffold_161

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_161_1
unknown

Not on your lists

comp(1..96)
DNA (96bp) protein (32aa)

This feature has no annotations

13_1_40cm_2_scaffold_161_2
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(520..1221)
DNA (702bp) protein (234aa)
Transcriptional regulator, ArsR family n=1 Tax=Caulobacter crescentus OR37 RepID=R0CXM8_CAUCE
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:ENZ81075.1}; TaxID=1292034 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Ca
regulatory protein ArsR
13_1_40cm_2_scaffold_161_3
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

1357..1794
DNA (438bp) protein (146aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI000371E48D
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
13_1_40cm_2_scaffold_161_4
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1934..2665)
DNA (732bp) protein (244aa)
Uncharacterized protein n=1 Tax=Burkholderia gladioli (strain BSR3) RepID=F2LLC7_BURGS
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
hypothetical protein
13_1_40cm_2_scaffold_161_5
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(2821..3591)
DNA (771bp) protein (257aa)
Metallophosphoesterase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q029N5_SOLUE
metallophosphoesterase
Metallophosphoesterase {ECO:0000313|EMBL:ABJ82241.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus
13_1_40cm_2_scaffold_161_6
RBG_16_Zixibacteria_50_21_curated, Zixibacteria, Bacteria

Not on your lists

comp(3626..4093)
DNA (468bp) protein (156aa)
thioesterase superfamily protein; K02614 acyl-CoA thioesterase [EC:3.1.2.-] Tax=RBG_16_Zixibacteria_50_21_curated
Uncharacterized protein n=2 Tax=Alcaligenes xylosoxydans xylosoxydans RepID=R4XT21_ALCXX
hypothetical protein
13_1_40cm_2_scaffold_161_7
gamma proteobacterium HIMB55, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4160..4516)
DNA (357bp) protein (119aa)
Cupin domain-containing protein n=1 Tax=gamma proteobacterium HIMB55 RepID=H3NWT6_9GAMM
Cupin domain-containing protein {ECO:0000313|EMBL:EHQ57756.1}; TaxID=745014 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade.;" source="gamma proteobacterium HIMB55.;"
hypothetical protein
13_1_40cm_2_scaffold_161_8
unknown

Not on your lists

comp(4675..5313)
DNA (639bp) protein (213aa)

This feature has no annotations

13_1_40cm_2_scaffold_161_9
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5484..6272)
DNA (789bp) protein (263aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI0002F57D40
conserved protein of unknown function; Diaminopimelate epimerase domain
Uncharacterized protein {ECO:0000313|EMBL:CCC97839.1}; TaxID=1064539 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum b
13_1_40cm_2_scaffold_161_10
unknown

Not on your lists

comp(6318..6638)
DNA (321bp) protein (107aa)

This feature has no annotations

13_1_40cm_2_scaffold_161_11
RBG_16_Deltaproteobacteria_50_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6739..7704
DNA (966bp) protein (322aa)
Uncharacterized protein n=1 Tax=Oceanibaculum indicum P24 RepID=K2J9J9_9PROT
transcriptional regulator Tax=RBG_16_Deltaproteobacteria_50_11_curated
transcriptional regulator
13_1_40cm_2_scaffold_161_12
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

7701..8852
DNA (1152bp) protein (384aa)
hypothetical protein n=1 Tax=Amycolatopsis nigrescens RepID=UPI0003608667 rbh
thiamine biosynthesis protein ThiF
Thiamine biosynthesis protein ThiF {ECO:0000313|EMBL:AHF14018.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella so
13_1_40cm_2_scaffold_161_13
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

8861..9610
DNA (750bp) protein (250aa)
Enoyl-CoA hydratase/isomerase family protein n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F7A5_ACIC5
enoyl-CoA hydratase/isomerase family protein
Enoyl-CoA hydratase/isomerase family protein {ECO:0000313|EMBL:ACO34586.1}; TaxID=240015 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Acidobacterium.;" source="Acidobacterium
13_1_40cm_2_scaffold_161_14
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

9637..10467
DNA (831bp) protein (277aa)
panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase (EC:2.1.2.11); K00606 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11] Tax=GWC2_Gemmatimonadetes_71_10_curated
panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase (EC:2.1.2.11)
3-methyl-2-oxobutanoate hydroxymethyltransferase n=1 Tax=Desulforudis audaxviator (strain MP104C) RepID=B1I1N7_DESAP
13_1_40cm_2_scaffold_161_15
Terriglobus roseus, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

10475..10963
DNA (489bp) protein (163aa)
Sortase-like acyltransferase n=1 Tax=Terriglobus roseus (strain DSM 18391 / NRRL B-41598 / KBS 63) RepID=I3ZKG5_TERRK
N-acetyltransferase
Sortase-like acyltransferase {ECO:0000313|EMBL:AFL89733.1}; TaxID=926566 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" source="Terriglobus roseus (strain DSM 18
13_1_40cm_2_scaffold_161_16
Terriglobus saanensis, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(10971..11378)
DNA (408bp) protein (136aa)
ArsR family transcriptional regulator n=1 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B71F25
ArsR family transcriptional regulator
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:ADV83465.1}; TaxID=401053 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" source="Terriglobus saanensis (
13_1_40cm_2_scaffold_161_17
Massilia consociata, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11503..12708
DNA (1206bp) protein (402aa)
Oxidoreductase, molybdopterin binding n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4ECS8_9CHLR
Molybdopterin-binding protein {ECO:0000313|EMBL:KFI05980.1}; TaxID=760117 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia consoci
sulfite oxidase and related enzymes
13_1_40cm_2_scaffold_161_18
Massilia consociata, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12701..13249
DNA (549bp) protein (183aa)
Putative cytochrome c region protein n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5EL65_BRASB
Cytochrome C {ECO:0000313|EMBL:KFI05981.1}; TaxID=760117 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia consociata.;"
cytochrome C region protein
13_1_40cm_2_scaffold_161_19
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

13275..13808
DNA (534bp) protein (178aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IJG9_KORVE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF42981.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strai
13_1_40cm_2_scaffold_161_20
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(14224..15108)
DNA (885bp) protein (295aa)
Uncharacterized protein n=1 Tax=Haloferax sulfurifontis ATCC BAA-897 RepID=M0I354_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG93668.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_2_scaffold_161_21
unknown

Not on your lists

comp(15105..15746)
DNA (642bp) protein (214aa)

This feature has no annotations

13_1_40cm_2_scaffold_161_22
Streptomyces glaucescens, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15746..16855)
DNA (1110bp) protein (370aa)
Uncharacterized protein n=1 Tax=Streptomyces sp. HGB0020 RepID=S2ZA70_9ACTO
binding-protein-dependent transporter
Binding-protein-dependent transporter {ECO:0000313|EMBL:AIS02122.1}; TaxID=1907 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces glaucescens
13_1_40cm_2_scaffold_161_23

Not on your lists

comp(16897..17427)
DNA (531bp) protein (177aa)
Marine sediment metagenome DNA, contig: S06H3_L06367 {ECO:0000313|EMBL:GAI02293.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
13_1_40cm_2_scaffold_161_24
Acidocella sp. MX-AZ02, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17446..18219
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5YKM9_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EKM99431.1}; TaxID=1214225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella sp. MX
hypothetical protein
13_1_40cm_2_scaffold_161_25

Not on your lists

comp(18238..19173)
DNA (936bp) protein (312aa)
hypothetical protein n=1 Tax=Caldimonas manganoxidans RepID=UPI00036AA284
Acetyltransferase (GNAT) family {ECO:0000313|EMBL:AIA14264.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
N-acetyltransferase GCN5
13_1_40cm_2_scaffold_161_26
unknown

Not on your lists

comp(19170..19820)
DNA (651bp) protein (217aa)

This feature has no annotations

13_1_40cm_2_scaffold_161_27
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

19892..21397
DNA (1506bp) protein (502aa)
Transcriptional regulator, GntR family n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AZR3_RUBXD rbh
GntR family transcriptional regulator
Transcriptional regulator, GntR family {ECO:0000313|EMBL:ABG03115.1}; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;"
13_1_40cm_2_scaffold_161_28
R_OP11_Gottesmanbacteria_46_14, Gottesmanbacteria, Microgenomates, Bacteria

Not on your lists

21494..22030
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Leptolyngbya sp. Heron Island J RepID=U9W356_9CYAN
Uncharacterized protein Tax=RIFCSPHIGHO2_01_FULL_OP11_Gottesmanbacteria_46_14_curated
13_1_40cm_2_scaffold_161_29
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

22184..23098
DNA (915bp) protein (305aa)
Uncharacterized protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FBV8_CONWI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB51373.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woe
13_1_40cm_2_scaffold_161_30
unknown

Not on your lists

23182..23400
DNA (219bp) protein (73aa)

This feature has no annotations

Displaying items 1-30 of 32 in total

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