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13_1_40cm_2_scaffold_1544

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_1544_1
unknown

Not on your lists

2..358
DNA (357bp) protein (119aa)

This feature has no annotations

13_1_40cm_2_scaffold_1544_2
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

360..1406
DNA (1047bp) protein (349aa)
metal-activated pyridoxal protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Putative amino acid aldolase or racemase id=4650281 bin=GWA2_Ignavibacteria_55_11 species=Candidatus Chloracidobacterium thermophilum genus=Candidatus Chloracidobacterium taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
hypothetical protein
13_1_40cm_2_scaffold_1544_3
unknown

Not on your lists

1440..1718
DNA (279bp) protein (93aa)

This feature has no annotations

13_1_40cm_2_scaffold_1544_4
RBG_13_Deltaproteobacteria_61_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1715..2155
DNA (441bp) protein (147aa)
hypothetical protein Tax=RBG_13_Deltaproteobacteria_61_14_curated
Putative uncharacterized protein id=2637582 bin=GWC2_Pelobacter_58_13 species=Desulfuromonas acetoxidans genus=Desulfuromonas taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
hypothetical protein
13_1_40cm_2_scaffold_1544_5
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

2261..2623
DNA (363bp) protein (121aa)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_40cm_2_scaffold_1544_6
RBG_16_Gammaproteobacteria_51_14_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2632..3288)
DNA (657bp) protein (219aa)
hemolysin III family channel protein; K11068 hemolysin III Tax=RBG_16_Gammaproteobacteria_51_14_curated
hemolysin III family channel protein; K11068 hemolysin III id=14624112 bin=bin5_DeltaP species=Desulfurispirillum indicum genus=Desulfurispirillum taxon_order=Chrysiogenales taxon_class=Chrysiogenetes phylum=Chrysiogenetes tax=bin5_DeltaP organism_group=Deltaproteobacteria
hemolysin-like protein
13_1_40cm_2_scaffold_1544_trna_1
unknown

Not on your lists

comp(3326..3398)
DNA (73bp)
transferRNA
13_1_40cm_2_scaffold_1544_7
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

3526..3963
DNA (438bp) protein (146aa)
N-acetyltransferase GCN5; K00619 amino-acid N-acetyltransferase [EC:2.3.1.1] Tax=RBG_16_Gemmatimonadetes_66_8_curated
GCN5-related N-acetyltransferase n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AS40_RUBXD
N-acetyltransferase GCN5
13_1_40cm_2_scaffold_1544_8
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

3960..4973
DNA (1014bp) protein (338aa)
hypothetical protein n=1 Tax=Streptomyces vitaminophilus RepID=UPI0003822D9D
Alcohol dehydrogenase zinc-binding domain protein {ECO:0000313|EMBL:EFH88108.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" s
alcohol dehydrogenase
13_1_40cm_2_scaffold_1544_9
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(5005..5766)
DNA (762bp) protein (254aa)
Chaperone protein DnaJ n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7F6_GEMAT
dnaJ; chaperone protein DnaJ; K03686 molecular chaperone DnaJ Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
dnaJ; chaperone protein DnaJ
13_1_40cm_2_scaffold_1544_10
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(6056..6676)
DNA (621bp) protein (207aa)
Protein GrpE n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7F5_GEMAT
grpE; GrpE protein; K03687 molecular chaperone GrpE Tax=RBG_16_Gemmatimonadetes_66_8_curated
Protein grpE
13_1_40cm_2_scaffold_1544_11
Brevibacillus panacihumi, Brevibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(6837..7661)
DNA (825bp) protein (275aa)
Lipase n=1 Tax=Brevibacillus panacihumi W25 RepID=V6M4Q1_9BACL
Lipase {ECO:0000313|EMBL:EST52865.1}; TaxID=1408254 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Brevibacillus.;" source="Brevibacillus panacihumi W25.;"
lysophospholipase
13_1_40cm_2_scaffold_1544_12
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(7661..8944)
DNA (1284bp) protein (428aa)
CinA-like protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=CINAL_GEMAT
CinA-like protein; K03742 competence/damage-inducible protein CinA Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Competence-damaged protein
13_1_40cm_2_scaffold_1544_13
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(8941..9582)
DNA (642bp) protein (214aa)
pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC:2.7.8.5); K00995 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] Tax=GWC2_Gemmatimonadetes_
pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC:2.7.8.5)
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7E9_GEMAT
13_1_40cm_2_scaffold_1544_14
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(9594..10268)
DNA (675bp) protein (225aa)
Gliding motility protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7E8_GEMAT
gliding motility protein; K06883 Tax=RBG_16_Gemmatimonadetes_66_8_curated
gliding motility protein
13_1_40cm_2_scaffold_1544_15
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(10284..10769)
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7E7_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Roadblock/LC7 family protein
13_1_40cm_2_scaffold_1544_16
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(10782..11384)
DNA (603bp) protein (201aa)
Recombination protein RecR n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7E6_GEMAT
recR; recombination protein RecR; K06187 recombination protein RecR Tax=GWC2_Gemmatimonadetes_71_10_curated
recR; recombination protein RecR
13_1_40cm_2_scaffold_1544_17
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(11391..11708)
DNA (318bp) protein (106aa)
Nucleoid-associated protein GAU_1113 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=Y1113_GEMAT
hypothetical protein; K09747 hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
UPF0133 protein ybaB
13_1_40cm_2_scaffold_1544_18
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(11746..13425)
DNA (1680bp) protein (560aa)
dnaX; DNA polymerase III gamma and tau subunit (EC:2.7.7.7); K02343 DNA polymerase III subunit gamma/tau [EC:2.7.7.7] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
DNA polymerase III gamma and tau subunit n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7E4_GEMAT
DNA polymerase III, subunits gamma and tau
13_1_40cm_2_scaffold_1544_19
unknown

Not on your lists

comp(13650..14645)
DNA (996bp) protein (332aa)

This feature has no annotations

13_1_40cm_2_scaffold_1544_20
Chlamydomonas reinhardtii, Chlamydomonas, Chlamydomonadales, Chlorophyceae, Chlorophyta, Viridiplantae

Not on your lists

comp(14648..16243)
DNA (1596bp) protein (532aa)
Plus agglutinin n=2 Tax=Chlamydomonas reinhardtii RepID=Q6SSE6_CHLRE
Plus agglutinin {ECO:0000313|EMBL:AAS07044.1}; TaxID=3055 species="Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Chlamydomonadaceae; Chlamydomonas.;" source="Chlamydomonas r
Fe-S oxidoreductase
13_1_40cm_2_scaffold_1544_21
unknown

Not on your lists

comp(16240..16341)
DNA (102bp) protein (34aa)

This feature has no annotations

13_1_40cm_2_scaffold_1544_22
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(16338..17015)
DNA (678bp) protein (226aa)
membrane protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
ribonuclease BN
Ribonuclease BN id=4638372 bin=GWC2_Methylomirabilis_70_16 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_1_40cm_2_scaffold_1544_23
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(17218..18966)
DNA (1749bp) protein (583aa)
Putative fructose-bisphosphate aldolase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7D9_GEMAT
putative fructose-bisphosphate aldolase Tax=RBG_16_Gemmatimonadetes_66_8_curated
putative fructose-bisphosphate aldolase
13_1_40cm_2_scaffold_1544_24
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(18990..19796)
DNA (807bp) protein (269aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7D7_GEMAT
hypothetical protein; K06167 PhnP protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
beta-lactamase domain protein
13_1_40cm_2_scaffold_1544_25
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(19798..21195)
DNA (1398bp) protein (466aa)
pykA; pyruvate kinase (EC:2.7.1.40); K00873 pyruvate kinase [EC:2.7.1.40] Tax=RBG_16_Gemmatimonadetes_66_8_curated
pykA; pyruvate kinase (EC:2.7.1.40)
Pyruvate kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7D6_GEMAT
13_1_40cm_2_scaffold_1544_26
Sphingobium indicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21261..21752)
DNA (492bp) protein (164aa)
MarR family transcriptional regulator n=1 Tax=Sphingobium indicum B90A RepID=I5B8D3_9SPHN
MarR family transcriptional regulator {ECO:0000313|EMBL:EIM65835.1}; TaxID=861109 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sp
MarR family transcriptional regulator
13_1_40cm_2_scaffold_1544_27
unknown

Not on your lists

comp(21901..22269)
DNA (369bp) protein (123aa)

This feature has no annotations

13_1_40cm_2_scaffold_1544_28
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

22306..22890
DNA (585bp) protein (195aa)
hypothetical protein
hypothetical protein Tax=RBG_16_Chloroflexi_63_12_curated
13_1_40cm_2_scaffold_1544_29
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(22997..23368)
DNA (372bp) protein (124aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
Displaying items 1-30 of 31 in total

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