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13_1_40cm_2_scaffold_15842

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_15842_1
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(14..859)
DNA (846bp) protein (282aa)
Tetratricopeptide TPR_2 repeat protein n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7H8V0_ANADF
hypothetical protein
Tetratricopeptide TPR_2 repeat protein {ECO:0000313|EMBL:ABS25146.1}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaero
13_1_40cm_2_scaffold_15842_2
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(887..1696)
DNA (810bp) protein (270aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003619ACB
Ku family containing protein; K10979 DNA end-binding protein Ku Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
DNA repair protein
13_1_40cm_2_scaffold_15842_3
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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1716..4379
DNA (2664bp) protein (888aa)
DNA ligase D; K01971 DNA ligase (ATP) [EC:6.5.1.1] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
DNA ligase D n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7H8V2_ANADF
DNA ligase D
13_1_40cm_2_scaffold_15842_4
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4340..4894
DNA (555bp) protein (185aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI0002F3A1F9
Bradyrhizobium elkanii strain UASWS1015 Contig162, whole genome shotgun sequence {ECO:0000313|EMBL:KIU51939.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrh
hypothetical protein
13_1_40cm_2_scaffold_15842_5
Chloroflexus aurantiacus, Chloroflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

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4971..5384
DNA (414bp) protein (138aa)
Putative uncharacterized protein n=2 Tax=Chloroflexus RepID=A9WJV9_CHLAA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABY36575.1}; TaxID=324602 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Chloroflexaceae; Chloroflexus.;" source="Chloroflexus
13_1_40cm_2_scaffold_15842_6
unknown

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5395..5526
DNA (132bp) protein (44aa)

This feature has no annotations

13_1_40cm_2_scaffold_15842_7
unknown

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5523..5894
DNA (372bp) protein (124aa)

This feature has no annotations

13_1_40cm_2_scaffold_15842_8
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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5949..7115
DNA (1167bp) protein (389aa)
dinB; DNA polymerase IV (EC:2.7.7.7); K02346 DNA polymerase IV [EC:2.7.7.7] Tax=GWC2_Gemmatimonadetes_71_10_curated
dinB; DNA polymerase IV (EC:2.7.7.7)
DNA polymerase IV n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9Y5_GEMAT
13_1_40cm_2_scaffold_15842_9
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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comp(7116..7529)
DNA (414bp) protein (138aa)
acT domain-containing protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
ACT domain-containing protein id=4139003 bin=GWF2_Methylomirabilis_70_14 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
acT domain-containing protein
13_1_40cm_2_scaffold_15842_10
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(7597..8955)
DNA (1359bp) protein (453aa)
putative S1B family peptidase (EC:3.4.21.-) Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
putative S1B family peptidase (EC:3.4.21.-)
Putative S1B family peptidase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3U7_GEMAT
13_1_40cm_2_scaffold_15842_11

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9077..9691
DNA (615bp) protein (205aa)
Glycosyl hydrolase BNR repeat-containing protein (Fragment) n=1 Tax=mine drainage metagenome RepID=T1CWG3_9ZZZZ
Glycosyl hydrolase BNR repeat-containing protein {ECO:0000313|EMBL:EQD74370.1}; Flags: Fragment;; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drai
hypothetical protein
13_1_40cm_2_scaffold_15842_12

Not on your lists

9691..12351
DNA (2661bp) protein (887aa)
Glycosyl hydrolase BNR repeat-containing protein n=2 Tax=mine drainage metagenome RepID=T1C3I3_9ZZZZ
Glycosyl hydrolase BNR repeat-containing protein {ECO:0000313|EMBL:EQD75448.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
13_1_40cm_2_scaffold_15842_13
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

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12391..13518
DNA (1128bp) protein (376aa)
Uncharacterized protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TH40_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:EFH90782.1}; Flags: Precursor;; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="
hypothetical protein
13_1_40cm_2_scaffold_15842_14
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(13501..15243)
DNA (1743bp) protein (581aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036DDEDA
Pyrrolo-quinoline quinone repeat-containing protein
Pyrrolo-quinoline quinone repeat-containing protein {ECO:0000313|EMBL:AHG90260.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_2_scaffold_15842_15
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(15705..16604)
DNA (900bp) protein (300aa)
Uncharacterized protein n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W779_UNCMA
protein of unknown function DUF4349
Uncharacterized protein {ECO:0000313|EMBL:AHG93147.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_2_scaffold_15842_16
Gracilimonas tropica, Gracilimonas, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

16700..17422
DNA (723bp) protein (241aa)
hypothetical protein n=1 Tax=Gracilimonas tropica RepID=UPI00036CC1CF
13_1_40cm_2_scaffold_15842_17
unknown

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17432..17728
DNA (297bp) protein (99aa)

This feature has no annotations

13_1_40cm_2_scaffold_15842_18
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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comp(17737..18549)
DNA (813bp) protein (271aa)
Pyrroline-5-carboxylate reductase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IRM0_KORVE rbh
pyrroline-5-carboxylate reductase
Pyrroline-5-carboxylate reductase {ECO:0000256|HAMAP-Rule:MF_01925, ECO:0000256|RuleBase:RU003903}; Short=P5C reductase {ECO:0000256|HAMAP-Rule:MF_01925};; Short=P5CR {ECO:0000256|HAMAP-Rule:MF_01925}
13_1_40cm_2_scaffold_15842_19
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(18546..19379)
DNA (834bp) protein (278aa)
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase {ECO:0000313|EMBL:CDM65366.1}; EC=2.3.1.117 {ECO:0000313|EMBL:CDM65366.1};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacte
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (EC:2.3.1.117)
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SIY0_RHOMR rbh
13_1_40cm_2_scaffold_15842_20
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(19366..19806)
DNA (441bp) protein (147aa)
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086366}; Short=HTPA synthase {ECO:0000256|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000256|HAMAP-Rule:M
4-hydroxy-tetrahydrodipicolinate synthase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=DAPA_KORVE
dihydrodipicolinate synthase
Displaying 20 items

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