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13_1_40cm_2_scaffold_1486

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_1486_1
unknown

Not on your lists

comp(3..311)
DNA (309bp) protein (103aa)

This feature has no annotations

13_1_40cm_2_scaffold_1486_2
Desulfovibrio magneticus, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(484..1512)
DNA (1029bp) protein (343aa)
Multidrug resistance efflux pump n=1 Tax=Desulfovibrio magneticus str. Maddingley MBC34 RepID=K6GKA7_9DELT
Multidrug resistance efflux pump {ECO:0000313|EMBL:EKO37410.1}; Flags: Precursor;; TaxID=1206767 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulf
secretion protein HlyD family protein
13_1_40cm_2_scaffold_1486_3
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(1509..2219)
DNA (711bp) protein (237aa)
ABC transporter, ATPase subunit n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IJC8_KORVE
ABC transporter ATPase
ABC transporter, ATPase subunit {ECO:0000313|EMBL:ABF43022.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatili
13_1_40cm_2_scaffold_1486_4
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(2228..3364)
DNA (1137bp) protein (379aa)
ABC efflux pump, inner membrane subunit n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IJC7_KORVE rbh
efflux ABC transporter inner membrane protein
ABC efflux pump, inner membrane subunit {ECO:0000313|EMBL:ABF43023.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter v
13_1_40cm_2_scaffold_1486_5
Geobacter soli, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3418..4041)
DNA (624bp) protein (208aa)
TetR family transcriptional regulator n=1 Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B3BA5D
TetR family transcriptional regulator
TetR family transcriptional regulator {ECO:0000313|EMBL:KIE43389.1}; TaxID=1510391 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geob
13_1_40cm_2_scaffold_1486_6
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(4147..5412)
DNA (1266bp) protein (422aa)
Isopenicillin-N epimerase n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8ENS1_RUNSL
class V aminotransferase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
isopenicillin-N epimerase
13_1_40cm_2_scaffold_1486_7
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(5459..6496)
DNA (1038bp) protein (346aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
hypothetical protein id=12557387 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
13_1_40cm_2_scaffold_1486_8
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(6540..6965)
DNA (426bp) protein (142aa)
OsmC-like protein n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q220S1_RHOFD
hypothetical protein; K07397 putative redox protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
OsmC-like protein
13_1_40cm_2_scaffold_1486_9
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(6973..7746)
DNA (774bp) protein (258aa)
hypothetical protein n=1 Tax=Methylotenera RepID=UPI00037BF968
iron permease FTR1 Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
iron permease FTR1
13_1_40cm_2_scaffold_1486_10
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

7983..8912
DNA (930bp) protein (310aa)
von Willebrand factor type A domain-containing protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
von Willebrand factor, type A id=12557382 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
13_1_40cm_2_scaffold_1486_11
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

9092..9415
DNA (324bp) protein (108aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00037A63AE
iron donor protein CyaY; K06202 CyaY protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
hypothetical protein
13_1_40cm_2_scaffold_1486_12
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

9412..11181
DNA (1770bp) protein (590aa)
Gamma-glutamyltranspeptidase n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DDJ7_SINAD
gamma-glutamyltranspeptidase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
gamma-glutamyltranspeptidase
13_1_40cm_2_scaffold_1486_13
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(11213..12232)
DNA (1020bp) protein (340aa)
proline racemase (EC:5.1.1.4); K01777 proline racemase [EC:5.1.1.4] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
proline racemase (EC:5.1.1.4)
Proline racemase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1CAR0_SPHTD
13_1_40cm_2_scaffold_1486_14
Thauera sp. 63, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12444..13358
DNA (915bp) protein (305aa)
Histone deacetylase n=1 Tax=Thauera sp. 63 RepID=N6XM42_9RHOO
Histone deacetylase {ECO:0000313|EMBL:ENO80420.1}; TaxID=497321 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. 63.;"
histone deacetylase
13_1_40cm_2_scaffold_1486_15
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

13334..14344
DNA (1011bp) protein (337aa)
ornithine cyclodeaminase (EC:4.3.1.12); K01750 ornithine cyclodeaminase [EC:4.3.1.12] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
ornithine cyclodeaminase (EC:4.3.1.12) id=24407474 bin=RBG_19FT_COMBO_GAL15_69_19 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
ornithine cyclodeaminase (EC:4.3.1.12)
13_1_40cm_2_scaffold_1486_16
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(14427..15179)
DNA (753bp) protein (251aa)
cyoA; Heme/copper-type cytochrome oxidase, subunit 2; K02275 cytochrome c oxidase subunit II [EC:1.9.3.1] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
hypothetical protein n=1 Tax=SAR406 cluster bacterium SCGC AB-629-J13 RepID=UPI00035C3883
cyoA; Heme/copper-type cytochrome oxidase, subunit 2
13_1_40cm_2_scaffold_1486_17
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(15176..15451)
DNA (276bp) protein (92aa)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
13_1_40cm_2_scaffold_1486_18
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(15448..15648)
DNA (201bp) protein (67aa)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
13_1_40cm_2_scaffold_1486_19
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(15653..15994)
DNA (342bp) protein (114aa)
hypothetical protein n=1 Tax=SAR406 cluster bacterium SCGC AB-629-J13 RepID=UPI00035E4E1A
Caa(3)-type oxidase, subunit IV Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
Caa(3)-type oxidase, subunit IV
13_1_40cm_2_scaffold_1486_20
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(16090..16674)
DNA (585bp) protein (195aa)
cytochrome c oxidase subunit III; K02276 cytochrome c oxidase subunit III [EC:1.9.3.1] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
Putative Cytochrome c oxidase, subunit III id=2731964 bin=GWC2_Ignavibacteria_56_12 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
cytochrome c oxidase subunit III
13_1_40cm_2_scaffold_1486_21
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(16780..18558)
DNA (1779bp) protein (593aa)
cyoB; Heme/copper-type cytochrome oxidase, subunit 1; K02274 cytochrome c oxidase subunit I [EC:1.9.3.1] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
Cytochrome-c oxidase id=5017086 bin=GWA2_Ignavibacteria_55_11 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome rbh
cyoB; Heme/copper-type cytochrome oxidase, subunit 1
13_1_40cm_2_scaffold_1486_22
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

18649..19851
DNA (1203bp) protein (401aa)
Putative uncharacterized protein n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LLC3_CHLTF
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
hypothetical protein
13_1_40cm_2_scaffold_1486_23
unknown

Not on your lists

19870..19959
DNA (90bp) protein (30aa)

This feature has no annotations

Displaying 23 items

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