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13_1_40cm_2_scaffold_1618

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_1618_1
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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178..438
DNA (261bp) protein (87aa)
ABC transporter-like protein; K09687 antibiotic transport system ATP-binding protein Tax=RBG_13_Bathyarchaeota_46_16b_curated
putative ABC transporter ATP-binding protein; K09687 antibiotic transport system ATP-binding protein id=24517718 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Gemmata obscuriglobus genus=Gemmata taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
ABC transporter ATP-binding protein
13_1_40cm_2_scaffold_1618_2
unknown

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comp(588..818)
DNA (231bp) protein (77aa)

This feature has no annotations

13_1_40cm_2_scaffold_1618_3
RBG_16_Zixibacteria_53_22_curated, Zixibacteria, Bacteria

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comp(966..1742)
DNA (777bp) protein (259aa)
hypothetical protein Tax=RBG_16_Zixibacteria_53_22_curated
Uncharacterized protein id=4068338 bin=GWF2_Melioribacter_38_21 species=unknown genus=Leptospira taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF2_Melioribacter_38_21 organism_group=Ignavibacteria
hypothetical protein
13_1_40cm_2_scaffold_1618_4
Methanosarcina mazei, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(1780..2118)
DNA (339bp) protein (113aa)
Peptidyl-prolyl cis-trans isomerase n=2 Tax=Methanosarcina mazei RepID=M1Q0N0_METMZ
Peptidyl-prolyl cis-trans isomerase
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU004231}; TaxID=192952 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Met
13_1_40cm_2_scaffold_1618_5
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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comp(2139..2741)
DNA (603bp) protein (201aa)
Acetyltransferase, ribosomal protein N-acetylase n=1 Tax=candidate division ZIXI bacterium RBG-1 RepID=T0MIT0_9BACT
N-acetyltransferase GCN5 Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
acetyltransferase, ribosomal protein N-acetylase
13_1_40cm_2_scaffold_1618_6
unknown

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3207..3608
DNA (402bp) protein (134aa)

This feature has no annotations

13_1_40cm_2_scaffold_1618_7
unknown

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3662..3925
DNA (264bp) protein (88aa)

This feature has no annotations

13_1_40cm_2_scaffold_1618_8
unknown

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4236..4421
DNA (186bp) protein (62aa)

This feature has no annotations

13_1_40cm_2_scaffold_1618_9
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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comp(4460..5488)
DNA (1029bp) protein (343aa)
UPF0273 protein TCELL_0155 n=1 Tax=Thermogladius cellulolyticus (strain 1633) RepID=I3TCU2_THEC1
hypothetical protein containing KaiC-domain Tax=RBG_13_Bathyarchaeota_38_9_curated
recombinase A
13_1_40cm_2_scaffold_1618_10
RBG_16_Bathyarchaeota_57_9_curated, Bathyarchaeota, Archaea

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comp(5974..6522)
DNA (549bp) protein (183aa)
hypothetical protein n=1 Tax=Crenarchaeota archaeon SCGC AAA471-O08 RepID=UPI0003829596
hypothetical protein Tax=RBG_16_Bathyarchaeota_57_9_curated
XRE family transcriptional regulator
13_1_40cm_2_scaffold_1618_11
RBG_16_Archaea_50_20_curated, Archaea

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6533..7633
DNA (1101bp) protein (367aa)
Methionine synthase II (Cobalamin-independent) n=2 Tax=mine drainage metagenome RepID=T1CGK4_9ZZZZ
cobalamin-independent synthase MetE Tax=RBG_16_Archaea_50_20_curated
vitamin-B12 independent methionine synthase
13_1_40cm_2_scaffold_1618_12
RBG_16_Archaea_50_20_curated, Archaea

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7634..8839
DNA (1206bp) protein (402aa)
methionine synthase (B12-independent); K00549 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] id=14631529 bin=bin9_gal15 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin9_gal15 organism_group=GAL15
methionine synthase (B12-independent); K00549 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] Tax=RBG_16_Archaea_50_20_curated
methionine synthase (B12-independent) (EC:2.1.1.14)
13_1_40cm_2_scaffold_1618_13
Cerapachys biroi, Cerapachys, Hymenoptera, Neoptera, Arthropoda, Metazoa

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8836..9741
DNA (906bp) protein (302aa)
Methylenetetrahydrofolate reductase {ECO:0000256|RuleBase:RU003862}; EC=1.5.1.20 {ECO:0000256|RuleBase:RU003862};; TaxID=443821 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; P
13_1_40cm_2_scaffold_1618_14
RBG_16_Archaea_50_20_curated, Archaea

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comp(9775..10368)
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Pyrococcus sp. (strain NA2) RepID=F4HKJ1_PYRSN
putative transcriptional regulator; K06024 segregation and condensation protein B Tax=RBG_16_Archaea_50_20_curated
hypothetical protein
13_1_40cm_2_scaffold_1618_15
RBG_16_Archaea_50_20_curated, Archaea

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comp(10346..10822)
DNA (477bp) protein (159aa)
Condensin subunit ScpA n=1 Tax=Thaumarchaeota archaeon SCGC AB-539-E09 RepID=M7TVH0_9ARCH
segregation and condensation protein A; K05896 segregation and condensation protein A Tax=RBG_16_Archaea_50_20_curated
13_1_40cm_2_scaffold_1618_16
RBG_16_Archaea_50_20_curated, Archaea

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comp(10954..14490)
DNA (3537bp) protein (1179aa)
Chromosome segregation ATPase n=1 Tax=Thaumarchaeota archaeon SCGC AB-539-E09 RepID=M7TB52_9ARCH
chromosome segregation protein smc1; K03529 chromosome segregation protein Tax=RBG_16_Archaea_50_20_curated
SMC domain-containing protein
13_1_40cm_2_scaffold_1618_17
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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comp(14509..15264)
DNA (756bp) protein (252aa)
uppS; undecaprenyl pyrophosphate synthase (EC:2.5.1.31) Tax=RBG_13_Bathyarchaeota_38_9_curated
undecaprenyl pyrophosphate synthetase (EC:2.5.1.31)
hypothetical protein n=1 Tax=Crenarchaeota archaeon SCGC AAA471-L14 RepID=UPI0003793FA5
13_1_40cm_2_scaffold_1618_18
RBG_16_Archaea_50_20_curated, Archaea

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comp(15258..16064)
DNA (807bp) protein (269aa)
Pnp; purine nucleoside phosphorylase; K00772 5'-methylthioadenosine phosphorylase [EC:2.4.2.28] Tax=RBG_16_Archaea_50_20_curated
methylthioadenosine phosphorylase (EC:2.4.2.28)
Probable S-methyl-5'-thioinosine phosphorylase n=1 Tax=Methanobacterium sp. (strain AL-21) RepID=F0T9Y4_METSL
13_1_40cm_2_scaffold_1618_19
Metallosphaera yellowstonensis, Metallosphaera, Sulfolobales, Thermoprotei, Crenarchaeota, Archaea

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comp(16061..16825)
DNA (765bp) protein (255aa)
Putative coiled-coil protein n=1 Tax=Metallosphaera yellowstonensis MK1 RepID=H2C8G9_9CREN
coiled-coil domain-containing protein
Putative coiled-coil protein {ECO:0000313|EMBL:EHP68445.1}; TaxID=671065 species="Archaea; Crenarchaeota; Thermoprotei; Sulfolobales; Sulfolobaceae; Metallosphaera.;" source="Metallosphaera yellowston
13_1_40cm_2_scaffold_1618_20
Pyrococcus furiosus, Pyrococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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16931..17614
DNA (684bp) protein (228aa)
Pheromone shutdown protein n=1 Tax=Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1) RepID=Q8U181_PYRFU
pheromone shutdown protein
Pheromone shutdown protein {ECO:0000313|EMBL:AAL81470.1}; TaxID=186497 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Pyrococcus.;" source="Pyrococcus furiosus (strain
Displaying 20 items

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