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13_1_40cm_2_scaffold_1601

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_1601_1
Candidatus Magnetobacterium bavaricum, Candidatus Magnetobacterium, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(3..1067)
DNA (1065bp) protein (355aa)
Putative uncharacterized protein n=1 Tax=uncultured bacterium 92 RepID=E3T6C4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KJU85026.1}; Flags: Fragment;; TaxID=29290 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Candidatus Magnetobacterium.;" source="Candidatus Ma
hypothetical protein
13_1_40cm_2_scaffold_1601_2
GWC2_Geobacteraceae_58_44_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1370..2209)
DNA (840bp) protein (280aa)
Fatty acid hydroxylase n=1 Tax=Geobacter sp. (strain M21) RepID=C6E5D3_GEOSM
fatty acid hydroxylase Tax=GWC2_Geobacteraceae_58_44_curated
fatty acid hydroxylase
13_1_40cm_2_scaffold_1601_3
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

2283..3968
DNA (1686bp) protein (562aa)
L-lactate transport n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01WM5_SOLUE
L-lactate transport; K03303 lactate transporter, LctP family Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
L-lactate transport
13_1_40cm_2_scaffold_1601_4
Corallococcus coralloides, Corallococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4157..4876
DNA (720bp) protein (240aa)
Uncharacterized protein n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MUS7_CORCM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFE07751.1}; TaxID=1144275 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Corallococcus.;" source="Cor
13_1_40cm_2_scaffold_1601_5
Corallococcus coralloides, Corallococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4880..5395
DNA (516bp) protein (172aa)
Peptidase M50 n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MUS6_CORCM
peptidase M50
Peptidase M50 {ECO:0000313|EMBL:AFE07750.1}; TaxID=1144275 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Corallococcus.;" source="Corallococcus
13_1_40cm_2_scaffold_1601_6
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

5410..5805
DNA (396bp) protein (132aa)
hslR_[H]; Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 - like) Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
ribosome-associated heat shock protein implicated in recycling of 50S subunit id=12555177 bin=CNBR_ACIDO species=Plesiocystis pacifica genus=Plesiocystis taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
ribosome-associated heat shock protein implicated in recycling of 50S subunit
13_1_40cm_2_scaffold_1601_7
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5900..6190)
DNA (291bp) protein (97aa)
Putative uncharacterized protein n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IJ32_ANADE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC81664.1}; Flags: Precursor;; TaxID=290397 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; An
13_1_40cm_2_scaffold_1601_8
GWC2_Nitrospirae_57_9_curated, Nitrospirae, Bacteria

Not on your lists

comp(6302..8410)
DNA (2109bp) protein (703aa)
malQ4; 4-alpha-glucanotransferase (EC:2.4.1.25) Tax=GWC2_Nitrospirae_57_9_curated
Glycogen debranching protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4YCF2_SORCE rbh
glycogen debranching protein
13_1_40cm_2_scaffold_1601_9
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(8417..10366)
DNA (1950bp) protein (650aa)
malto-oligosyltrehalose trehalohydrolase (EC:3.2.1.141)
Malto-oligosyltrehalose trehalohydrolase {ECO:0000256|PIRNR:PIRNR006337}; Short=MTHase {ECO:0000256|PIRNR:PIRNR006337};; EC=3.2.1.141 {ECO:0000256|PIRNR:PIRNR006337};; 4-alpha-D-((1->4)-alpha-D-glucan
Malto-oligosyltrehalose trehalohydrolase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02CI5_SOLUE rbh
13_1_40cm_2_scaffold_1601_10
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(10392..12353)
DNA (1962bp) protein (654aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI000310D1D4 rbh
multi-sensor hybrid histidine kinase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
PAS sensor protein
13_1_40cm_2_scaffold_1601_11
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(12380..14248)
DNA (1869bp) protein (623aa)
1A family penicillin-binding protein (EC:2.4.1.129) Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
putative penicillin-binding protein 1B (EC:2.4.1.129 3.4.-.-)
Multimodular transpeptidase-transglycosylase id=4841960 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_1_40cm_2_scaffold_1601_12
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(14392..15069)
DNA (678bp) protein (226aa)
YkoY family integral membrane protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
putative stress adaptation transporter id=12556221 bin=CNBR_ACIDO species=Deinococcus sp. 2009 genus=Deinococcus taxon_order=Deinococcales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
YkoY family integral membrane protein
13_1_40cm_2_scaffold_1601_13
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

15266..15613
DNA (348bp) protein (116aa)
HspR; K13640 MerR family transcriptional regulator, heat shock protein HspR Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
transcriptional regulator, MerR family; K13640 MerR family transcriptional regulator, heat shock protein HspR id=12556222 bin=CNBR_ACIDO species=Nitrolancetus hollandicus genus=Nitrolancetus taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
HspR
13_1_40cm_2_scaffold_1601_14
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

15805..16848
DNA (1044bp) protein (348aa)
chaperone DnaJ domain-containing protein; K05516 curved DNA-binding protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
chaperone DnaJ domain-containing protein; K05516 curved DNA-binding protein id=12556223 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? rbh
chaperone DnaJ domain-containing protein
13_1_40cm_2_scaffold_1601_15
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

17232..19847
DNA (2616bp) protein (872aa)
ATP-dependent chaperone ClpB; K03695 ATP-dependent Clp protease ATP-binding subunit ClpB Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
ATP-dependent chaperone ClpB; K03695 ATP-dependent Clp protease ATP-binding subunit ClpB id=12556224 bin=CNBR_ACIDO species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
ATP-dependent chaperone ClpB
13_1_40cm_2_scaffold_1601_16
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

19891..21777
DNA (1887bp) protein (629aa)
ATP-dependent metalloprotease FtsH (EC:3.6.4.3); K03798 cell division protease FtsH [EC:3.4.24.-] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
ATP-dependent metalloprotease FtsH (EC:3.6.4.3); K03798 cell division protease FtsH [EC:3.4.24.-] id=12556225 bin=CNBR_ACIDO species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
ATP-dependent metalloprotease FtsH (EC:3.6.4.3)
13_1_40cm_2_scaffold_1601_17
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(21938..23128)
DNA (1191bp) protein (397aa)
Major facilitator superfamily MFS_1 n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02A48_SOLUE rbh
major facilitator transporter Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
major facilitator transporter
13_1_40cm_2_scaffold_1601_18
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

23191..24483
DNA (1293bp) protein (431aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A703_GEMAT rbh
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
hypothetical protein
13_1_40cm_2_scaffold_1601_19
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(24559..24786)
DNA (228bp) protein (76aa)
Iron sulfur domain protein-containing, CDGSH-type domain protein n=1 Tax=mine drainage metagenome RepID=T1BF30_9ZZZZ
Zinc finger, CDGSH-type Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
Zinc finger, CDGSH-type
13_1_40cm_2_scaffold_1601_20
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(24790..26211)
DNA (1422bp) protein (474aa)
rho; transcription termination factor Rho; K03628 transcription termination factor Rho Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
rho; transcription termination factor Rho; K03628 transcription termination factor Rho id=12556226 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? rbh
rho; transcription termination factor Rho
13_1_40cm_2_scaffold_1601_21
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(26375..26746)
DNA (372bp) protein (124aa)
FAD linked oxidase domain-containing protein; K00104 glycolate oxidase [EC:1.1.3.15] id=12556227 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
CoA-binding protein; K06929 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
hypothetical protein
13_1_40cm_2_scaffold_1601_22
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(26827..27993)
DNA (1167bp) protein (389aa)
L-aspartate aminotransferase apoenzyme (EC:2.6.1.1); K00812 aspartate aminotransferase [EC:2.6.1.1] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
L-aspartate aminotransferase (EC:2.6.1.1)
L-aspartate aminotransferase apoenzyme n=1 Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SG59_THEM7
13_1_40cm_2_scaffold_1601_23
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(28160..28654)
DNA (495bp) protein (165aa)
pantetheine-phosphate adenylyltransferase (EC:2.7.7.3); K00954 pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
pantetheine-phosphate adenylyltransferase (EC:2.7.7.3)
hypothetical protein id=8266694 bin=CD_OP8_4m species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=CD_OP8_4m organism_group=OP8 (Aminicenantes)
13_1_40cm_2_scaffold_1601_24
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(28642..29181)
DNA (540bp) protein (180aa)
putative Ribosomal RNA small subunit methyltransferase D (EC:2.1.1.52) id=12556229 bin=CNBR_ACIDO species=Alicyclobacillus pohliae genus=Alicyclobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
putative methyltransferase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
methyltransferase
13_1_40cm_2_scaffold_1601_25
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(29313..31379)
DNA (2067bp) protein (689aa)
ATP-dependent DNA helicase RecG; K03655 ATP-dependent DNA helicase RecG [EC:3.6.4.12] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
ATP-dependent DNA helicase RecG; K03655 ATP-dependent DNA helicase RecG [EC:3.6.4.12] id=12556230 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
ATP-dependent DNA helicase RecG
13_1_40cm_2_scaffold_1601_26
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(31376..31966)
DNA (591bp) protein (197aa)
id=12556231 Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
id=12556231 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
13_1_40cm_2_scaffold_1601_27
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(31989..32519)
DNA (531bp) protein (177aa)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
13_1_40cm_2_scaffold_1601_28
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(32564..32824)
DNA (261bp) protein (87aa)
DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog n=1 Tax=Chthonomonas calidirosea T49 RepID=S0EY64_9BACT
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog
13_1_40cm_2_scaffold_1601_29
unknown

Not on your lists

comp(32821..33009)
DNA (189bp) protein (63aa)

This feature has no annotations

13_1_40cm_2_scaffold_1601_30
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(33081..34034)
DNA (954bp) protein (318aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003822614
ribokinase-like domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
ribokinase-like domain-containing protein
Displaying items 1-30 of 38 in total

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