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13_1_40cm_2_scaffold_18

Search features with annotation key words

Displaying items 1-30 of 61 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_18_1
Tolypothrix campylonemoides, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

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69..917
DNA (849bp) protein (283aa)
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI000373EFF4
Uncharacterized protein {ECO:0000313|EMBL:KIJ77619.1}; TaxID=1245935 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix campylonemoides VB511288.;"
methylase involved in ubiquinone/menaquinone biosynthesis
13_1_40cm_2_scaffold_18_2
unknown

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1037..1717
DNA (681bp) protein (227aa)

This feature has no annotations

13_1_40cm_2_scaffold_18_3
unknown

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2045..2170
DNA (126bp) protein (42aa)

This feature has no annotations

13_1_40cm_2_scaffold_18_4
unknown

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2285..2545
DNA (261bp) protein (87aa)

This feature has no annotations

13_1_40cm_2_scaffold_18_5
unknown

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2892..3434
DNA (543bp) protein (181aa)

This feature has no annotations

13_1_40cm_2_scaffold_18_6
RBG_16_Archaea_50_20_curated, Archaea

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comp(3535..3960)
DNA (426bp) protein (142aa)
hypothetical protein Tax=RBG_16_Archaea_50_20_curated
13_1_40cm_2_scaffold_18_7
RBG_16_Euryarchaeota_62_10_curated, Euryarchaeota, Archaea

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4153..4830
DNA (678bp) protein (226aa)
Methyltransferase type 11 n=1 Tax=Thermoplasmatales archaeon Gpl RepID=T0N595_9EURY
Methylase involved in ubiquinone/menaquinone biosynthesis Tax=RBG_16_Euryarchaeota_62_10_curated
type 11 methyltransferase
13_1_40cm_2_scaffold_18_8
unknown

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5057..5938
DNA (882bp) protein (294aa)

This feature has no annotations

13_1_40cm_2_scaffold_18_9
archaeon Loki, Lokiarchaeota, Archaea

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comp(5932..6936)
DNA (1005bp) protein (335aa)
Putative Aldo/keto reductase family protein n=1 Tax=uncultured marine microorganism HF4000_ANIW141K23 RepID=B3T5Q4_9ZZZZ
L-glyceraldehyde 3-phosphate reductase {ECO:0000313|EMBL:KKK45160.1}; TaxID=1538547 species="Archaea; Lokiarchaeota; 'Lokiarchaeum'.;" source="archaeon Loki.;"
aldo/keto reductase
13_1_40cm_2_scaffold_18_10

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comp(7136..7534)
DNA (399bp) protein (133aa)
Phosphoesterase PA-phosphatase related protein n=1 Tax=Methanobacterium sp. (strain AL-21) RepID=F0T6R2_METSL
Phosphoesterase PA-phosphatase related protein {ECO:0000313|EMBL:CEG13514.1}; TaxID=717931 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="groundwater metagenome.;"
phosphoesterase PA-phosphatase-like protein
13_1_40cm_2_scaffold_18_11

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7939..8292
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46BB8_METBF
Uncharacterized protein {ECO:0000313|EMBL:AHM02006.1}; TaxID=1368239 species="Archaea; Crenarchaeota; miscellaneous Crenarchaeota group; environmental samples.;" source="uncultured miscellaneous Crena
hypothetical protein
13_1_40cm_2_scaffold_18_12
RBG_19FT_COMBO_Zixibacteria_42_43_curated, Zixibacteria, Bacteria

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comp(8289..9821)
DNA (1533bp) protein (511aa)
putative formiminotransferase-cyclodeaminase (EC:2.1.2.5 4.3.1.4); K13990 glutamate formiminotransferase / formiminotetrahydrofolate cyclodeaminase [EC:2.1.2.5 4.3.1.4] id=1250805 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
putative formiminotransferase-cyclodeaminase (EC:2.1.2.5 4.3.1.4); K13990 glutamate formiminotransferase / formiminotetrahydrofolate cyclodeaminase [EC:2.1.2.5 4.3.1.4] Tax=RBG_19FT_COMBO_Zixibacteria
putative formiminotransferase-cyclodeaminase (EC:2.1.2.5 4.3.1.4)
13_1_40cm_2_scaffold_18_13
RBG_16_Bathyarchaeota_57_9_curated, Bathyarchaeota, Archaea

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comp(9886..10374)
DNA (489bp) protein (163aa)
NUDIX hydrolase n=1 Tax=Thermofilum pendens (strain Hrk 5) RepID=A1RZ11_THEPD
hypothetical protein Tax=RBG_16_Bathyarchaeota_57_9_curated
NUDIX hydrolase
13_1_40cm_2_scaffold_18_14
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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comp(10390..10740)
DNA (351bp) protein (117aa)
Nascent polypeptide-associated complex protein n=1 Tax=Methanolinea tarda NOBI-1 RepID=G6FK83_9EURY
hypothetical protein Tax=RBG_13_Bathyarchaeota_46_16b_curated
alpha-NAC-like protein
13_1_40cm_2_scaffold_18_15
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

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comp(10783..11268)
DNA (486bp) protein (162aa)
PUA domain containing protein n=1 Tax=Archaeoglobus profundus (strain DSM 5631 / JCM 9629 / NBRC 100127 / Av18) RepID=D2RGA6_ARCPA
PUA domain containing protein; K07398 conserved protein with predicted RNA binding PUA domain Tax=RBG_16_Bathyarchaeota_48_13_curated
PUA domain containing protein
13_1_40cm_2_scaffold_18_16
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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11342..11845
DNA (504bp) protein (168aa)
XRE family transcriptional regulator n=1 Tax=Methanobacterium formicicum DSM 3637 RepID=K2RA04_METFO
transcriptional regulator, xre family; K03627 putative transcription factor Tax=RBG_13_Bathyarchaeota_38_9_curated
XRE family transcriptional regulator
13_1_40cm_2_scaffold_18_17
unknown

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12214..12489
DNA (276bp) protein (92aa)

This feature has no annotations

13_1_40cm_2_scaffold_18_18
RBG_16_Archaea_50_20_curated, Archaea

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comp(12497..13033)
DNA (537bp) protein (179aa)
hypothetical protein; K07254 tRNA (cytidine56-2'-O)-methyltransferase [EC:2.1.1.206] Tax=RBG_16_Archaea_50_20_curated
tRNA (cytidine(56)-2'-O)-methyltransferase n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GX36_METFV
hypothetical protein
13_1_40cm_2_scaffold_18_19
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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13114..13650
DNA (537bp) protein (179aa)
Transcription factor E n=1 Tax=Thaumarchaeota archaeon SCGC AB-539-E09 RepID=M7T9K2_9ARCH
transcription factor Tax=RBG_13_Bathyarchaeota_38_9_curated
tfe; transcription factor E
13_1_40cm_2_scaffold_18_20
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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13667..14434
DNA (768bp) protein (256aa)
Uncharacterized protein n=1 Tax=Pyrococcus sp. ST04 RepID=I3RDG4_9EURY
hypothetical protein Tax=RBG_13_Bathyarchaeota_38_9_curated
hypothetical protein
13_1_40cm_2_scaffold_18_21
GWB1_OP11_39_10b, Woesebacteria, Microgenomates, Bacteria

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14484..15290
DNA (807bp) protein (269aa)
Uncharacterized protein n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NM93_HALUD
Glycosyltransferase {ECO:0000313|EMBL:KKQ92980.1}; TaxID=1618573 species="Bacteria; Microgenomates.;" source="Microgenomates (Woesebacteria) bacterium GW2011_GWB1_39_10b.;"
hypothetical protein
13_1_40cm_2_scaffold_18_22
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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15858..16343
DNA (486bp) protein (162aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF84115.1}; TaxID=1459636 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitr
13_1_40cm_2_scaffold_18_23
RBG_13_Chloroflexi_68_17_curated, Chloroflexi, Bacteria

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comp(16676..17593)
DNA (918bp) protein (306aa)
hypothetical protein Tax=RBG_13_Chloroflexi_68_17_curated
hypothetical protein id=1247164 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
hypothetical protein
13_1_40cm_2_scaffold_18_24
RBG_16_Archaea_50_20_curated, Archaea

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comp(17620..18903)
DNA (1284bp) protein (428aa)
hisS; histidine--tRNA ligase (EC:6.1.1.21) Tax=RBG_16_Archaea_50_20_curated
histidyl-tRNA synthetase (EC:6.1.1.21)
Histidyl-tRNA synthetase n=1 Tax=Candidatus Nitrosopumilus sp. AR2 RepID=K0BAN0_9ARCH
13_1_40cm_2_scaffold_18_25
RBG_16_Archaea_50_20_curated, Archaea

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comp(18961..19506)
DNA (546bp) protein (182aa)
tRNA-splicing endonuclease subunit beta; K01170 tRNA-intron endonuclease, archaea type [EC:3.1.27.9] Tax=RBG_16_Archaea_50_20_curated
tRNA intron endonuclease n=1 Tax=Thaumarchaeota archaeon SCGC AB-539-E09 RepID=M7U2G4_9ARCH
tRNA intron endonuclease, catalytic domain-containing protein
13_1_40cm_2_scaffold_18_26
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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19520..20647
DNA (1128bp) protein (376aa)
S-methyl-5-thioribose-1-phosphate isomerase (EC:5.3.1.23)
Putative methylthioribose-1-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_01678}; Short=M1Pi {ECO:0000256|HAMAP-Rule:MF_01678};; Short=MTR-1-P isomerase {ECO:0000256|HAMAP-Rule:MF_01678};; EC=5.3.1.2
methylthioribose-1-phosphate isomerase n=1 Tax=Marine Group I thaumarchaeote SCGC AB-629-I23 RepID=UPI00037386CE
13_1_40cm_2_scaffold_18_27
RBG_16_Archaea_50_20_curated, Archaea

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comp(20681..21433)
DNA (753bp) protein (251aa)
adenine phosphoribosyltransferase; K00759 adenine phosphoribosyltransferase [EC:2.4.2.7] Tax=RBG_16_Archaea_50_20_curated
PRPP-binding protein, adenine/guanine phosphoribosyltransferase n=1 Tax=Thaumarchaeota archaeon SCGC AB-539-E09 RepID=M7T8W6_9ARCH
Adenine/guanine phosphoribosyltransferase-related PRPP-binding protein
13_1_40cm_2_scaffold_18_28
RBG_16_Archaea_50_20_curated, Archaea

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comp(21449..21916)
DNA (468bp) protein (156aa)
deoxycytidine triphosphate deaminase n=1 Tax=Thermococcus zilligii RepID=UPI00029A8031
deoxycytidine triphosphate deaminase Tax=RBG_16_Archaea_50_20_curated
deoxycytidine triphosphate deaminase
13_1_40cm_2_scaffold_18_29
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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21970..22662
DNA (693bp) protein (231aa)
DNA-3-methyladenine glycosylase; K01247 DNA-3-methyladenine glycosylase II [EC:3.2.2.21] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
HhH-GPD superfamily base excision DNA repair protein (EC:3.2.2.21)
Putative DNA-3-methyladenine glycosylase II n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IFH7_NITGG
13_1_40cm_2_scaffold_18_30
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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23064..23402
DNA (339bp) protein (113aa)
hypothetical protein n=1 Tax=Amycolatopsis benzoatilytica RepID=UPI0003729652
hypothetical protein Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
Displaying items 1-30 of 61 in total

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