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13_1_40cm_2_scaffold_1748

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_1748_1
Sulfolobus islandicus, Sulfolobus, Sulfolobales, Thermoprotei, Crenarchaeota, Archaea

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comp(3..557)
DNA (555bp) protein (185aa)
Circadian clock protein KaiC central region n=11 Tax=Sulfolobus RepID=C3MKC7_SULIL
circadian clock protein KaiC
Putative circadian clock protein, KaiC {ECO:0000313|EMBL:ACP54270.1}; TaxID=427318 species="Archaea; Crenarchaeota; Thermoprotei; Sulfolobales; Sulfolobaceae; Sulfolobus.;" source="Sulfolobus islandic
13_1_40cm_2_scaffold_1748_2
unknown

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comp(561..764)
DNA (204bp) protein (68aa)

This feature has no annotations

13_1_40cm_2_scaffold_1748_3
Pyrococcus furiosus, Pyrococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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comp(712..1602)
DNA (891bp) protein (297aa)
Uncharacterized protein n=2 Tax=Pyrococcus furiosus RepID=I6V2V8_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAL80226.1}; TaxID=186497 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Pyrococcus.;" source="Pyrococcus furiosus (strain ATC
13_1_40cm_2_scaffold_1748_4

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1659..2189
DNA (531bp) protein (177aa)
50S ribosomal protein L22P n=1 Tax=Thaumarchaeota archaeon SCGC AB-539-E09 RepID=M7TAY8_9ARCH
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004007}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L22
13_1_40cm_2_scaffold_1748_5

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2190..2888
DNA (699bp) protein (233aa)
Ribosomal protein S3, eukaryotic/archaeal type (Fragment) n=1 Tax=Thaumarchaeota archaeon SCGC AB-539-E09 RepID=M7TAB9_9ARCH
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
rps3p; 30S ribosomal protein S3
13_1_40cm_2_scaffold_1748_6
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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2866..3081
DNA (216bp) protein (72aa)
50S ribosomal protein L29P n=1 Tax=Thaumarchaeota archaeon SCGC AB-539-E09 RepID=M7TT83_9ARCH
50S ribosomal protein L29P; K02904 large subunit ribosomal protein L29 Tax=RBG_13_Bathyarchaeota_38_9_curated
RpmC; ribosomal protein L29
13_1_40cm_2_scaffold_1748_7
Methanosaeta concilii, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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3082..3363
DNA (282bp) protein (94aa)
rnpA; ribonuclease P protein component 1 (EC:3.1.26.5)
Ribonuclease P protein component 1 {ECO:0000256|HAMAP-Rule:MF_00754}; Short=RNase P component 1 {ECO:0000256|HAMAP-Rule:MF_00754};; EC=3.1.26.5 {ECO:0000256|HAMAP-Rule:MF_00754};; Rpp29 {ECO:0000256|H
Ribonuclease P protein component 1 n=1 Tax=Methanosaeta concilii (strain ATCC 5969 / DSM 3671 / JCM 10134 / NBRC 103675 / OCM 69 / GP-6) RepID=F4BZV5_METCG
13_1_40cm_2_scaffold_1748_8
unknown

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comp(3527..3847)
DNA (321bp) protein (107aa)

This feature has no annotations

13_1_40cm_2_scaffold_1748_9
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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3893..4132
DNA (240bp) protein (80aa)
50S ribosomal protein L14 n=1 Tax=Aciduliprofundum sp. (strain MAR08-339) RepID=L0HJQ3_ACIS0
rpl14p; 50S ribosomal protein L14p Tax=RBG_13_Bathyarchaeota_38_9_curated
50S ribosomal protein L14P
13_1_40cm_2_scaffold_1748_10

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4205..4504
DNA (300bp) protein (100aa)
50S ribosomal protein L24P n=1 Tax=Thermogladius cellulolyticus (strain 1633) RepID=I3TDC4_THEC1
50S ribosomal protein L24P {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L24
13_1_40cm_2_scaffold_1748_11
Ignicoccus hospitalis, Ignicoccus, Desulfurococcales, Thermoprotei, Crenarchaeota, Archaea

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4511..5260
DNA (750bp) protein (250aa)
30S ribosomal protein S4e n=1 Tax=Ignicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125) RepID=RS4E_IGNH4
30S ribosomal protein S4
30S ribosomal protein S4e {ECO:0000255|HAMAP-Rule:MF_00485}; TaxID=453591 species="Archaea; Crenarchaeota; Thermoprotei; Desulfurococcales; Desulfurococcaceae; Ignicoccus.;" source="Ignicoccus hospita
13_1_40cm_2_scaffold_1748_12

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5262..5801
DNA (540bp) protein (180aa)
50S ribosomal protein L5 n=1 Tax=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) RepID=A2BMD2_HYPBU
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
rpl5p; 50S ribosomal protein L5P
13_1_40cm_2_scaffold_1748_13
RBG_16_Archaea_50_20_curated, Archaea

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5981..6364
DNA (384bp) protein (128aa)
30S ribosomal protein S8 n=1 Tax=uncultured marine crenarchaeote E37-7F RepID=G9BAP1_9CREN
30S ribosomal protein S8; K02994 small subunit ribosomal protein S8 Tax=RBG_16_Archaea_50_20_curated
30S ribosomal protein S8P
13_1_40cm_2_scaffold_1748_14
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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6375..6950
DNA (576bp) protein (192aa)
50S ribosomal protein L6 n=1 Tax=Pyrolobus fumarii (strain DSM 11204 / 1A) RepID=G0ECG1_PYRF1
50S ribosomal protein L6P; K02933 large subunit ribosomal protein L6 Tax=RBG_13_Bathyarchaeota_38_9_curated
50S ribosomal protein L6P
13_1_40cm_2_scaffold_1748_15
Thermoproteus uzoniensis, Thermoproteus, Thermoproteales, Thermoprotei, Crenarchaeota, Archaea

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6947..7438
DNA (492bp) protein (164aa)
50S ribosomal protein L32e n=1 Tax=Thermoproteus uzoniensis (strain 768-20) RepID=F2L315_THEU7
50S ribosomal protein L32e
50S ribosomal protein L32e {ECO:0000256|HAMAP-Rule:MF_00810}; TaxID=999630 species="Archaea; Crenarchaeota; Thermoprotei; Thermoproteales; Thermoproteaceae; Thermoproteus.;" source="Thermoproteus uzon
13_1_40cm_2_scaffold_1748_16
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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7435..7863
DNA (429bp) protein (143aa)
50S ribosomal protein L19e n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GZD7_METFV
50S ribosomal protein L19e
LSU ribosomal protein l19e; K02885 large subunit ribosomal protein L19e Tax=RBG_13_Bathyarchaeota_38_9_curated
13_1_40cm_2_scaffold_1748_17
RBG_16_Archaea_50_20_curated, Archaea

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7867..8466
DNA (600bp) protein (200aa)
50S ribosomal protein L18P n=1 Tax=Vulcanisaeta distributa (strain DSM 14429 / JCM 11212 / NBRC 100878 / IC-017) RepID=E1QQR0_VULDI
rpl18p; 50S ribosomal protein L18; K02881 large subunit ribosomal protein L18 Tax=RBG_16_Archaea_50_20_curated
50S ribosomal protein L18
13_1_40cm_2_scaffold_1748_18
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

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8463..9095
DNA (633bp) protein (211aa)
30S ribosomal protein S5 n=1 Tax=Thaumarchaeota archaeon SCGC AB-539-E09 RepID=M7T8C7_9ARCH
30S ribosomal protein S5; K02988 small subunit ribosomal protein S5 Tax=RBG_16_Bathyarchaeota_48_13_curated
30S ribosomal protein S5
13_1_40cm_2_scaffold_1748_19
Ignicoccus hospitalis, Ignicoccus, Desulfurococcales, Thermoprotei, Crenarchaeota, Archaea

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9096..9584
DNA (489bp) protein (163aa)
50S ribosomal protein L30P n=1 Tax=Ignicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125) RepID=RL30_IGNH4
rpl30p; 50S ribosomal protein L30
50S ribosomal protein L30P {ECO:0000255|HAMAP-Rule:MF_01371}; TaxID=453591 species="Archaea; Crenarchaeota; Thermoprotei; Desulfurococcales; Desulfurococcaceae; Ignicoccus.;" source="Ignicoccus hospit
13_1_40cm_2_scaffold_1748_20
Desulfurococcus fermentans, Desulfurococcus, Desulfurococcales, Thermoprotei, Crenarchaeota, Archaea

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9725..10138
DNA (414bp) protein (138aa)
Small heat shock protein HSP20 n=1 Tax=Desulfurococcus fermentans DSM 16532 RepID=I3XSD3_9CREN
small heat shock protein HSP20
Small heat shock protein HSP20 {ECO:0000313|EMBL:AFL66857.1}; TaxID=768672 species="Archaea; Crenarchaeota; Thermoprotei; Desulfurococcales; Desulfurococcaceae; Desulfurococcus.;" source="Desulfurococ
Displaying 20 items

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