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13_1_40cm_2_scaffold_188

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_188_1
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(2..1888)
DNA (1887bp) protein (629aa)
Putative S9C family peptidase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A855_GEMAT
putative S9C family peptidase Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
WD40-like beta Propeller containing protein
13_1_40cm_2_scaffold_188_2
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(1979..3574)
DNA (1596bp) protein (532aa)
OmpA/MotB domain protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T4B5_PALPW
ompa/motb domain-containing protein
OmpA/MotB domain-containing protein Tax=GWC2_Gemmatimonadetes_71_10_curated
13_1_40cm_2_scaffold_188_3
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(3620..5065)
DNA (1446bp) protein (482aa)
OmpA/MotB domain protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T4B5_PALPW
OmpA/MotB domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
OmpA/MotB domain-containing protein
13_1_40cm_2_scaffold_188_4
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(5153..7309)
DNA (2157bp) protein (719aa)
Methyl-accepting chemotaxis sensory transducer, class 44H n=2 Tax=Geobacter sulfurreducens RepID=D7AFC0_GEOSK
methyl-accepting chemotaxis sensory transducer; K03406 methyl-accepting chemotaxis protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
mcp44H; methyl-accepting chemotaxis sensory transducer, class 44H
13_1_40cm_2_scaffold_188_5
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

7581..8648
DNA (1068bp) protein (356aa)
6-phosphofructokinase (EC:2.7.1.11); K00850 6-phosphofructokinase [EC:2.7.1.11] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
6-phosphofructokinase (EC:2.7.1.11)
6-phosphofructokinase n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UUB5_ROSS1
13_1_40cm_2_scaffold_188_6
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

8718..11276
DNA (2559bp) protein (853aa)
Putative helicase n=1 Tax=uncultured bacterium BAC-L1N9 RepID=Q4JIR3_9BACT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
helicase, DEAD/DEAH family
13_1_40cm_2_scaffold_188_7
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(11273..11764)
DNA (492bp) protein (164aa)
TetR family transcriptional regulator n=1 Tax=Streptomyces sp. CcalMP-8W RepID=UPI00036E90F3
Transcriptional regulator, TetR family
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_2_scaffold_188_8

Not on your lists

11930..12358
DNA (429bp) protein (143aa)
Putative uncharacterized protein n=1 Tax=uncultured bacterium BAC-L1N9 RepID=Q4JIR5_9BACT
Uncharacterized protein {ECO:0000313|EMBL:AHN97945.1}; TaxID=1447241 species="Bacteria; environmental samples.;" source="uncultured bacterium lac160.;"
13_1_40cm_2_scaffold_188_9
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

12379..12867
DNA (489bp) protein (163aa)
hypothetical protein; K12073 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [EC:3.1.2.28] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Putative Pol-Pal system-associated acyl-CoA thioesterase n=1 Tax=mine drainage metagenome RepID=E6PEA1_9ZZZZ
thioesterase superfamily protein
13_1_40cm_2_scaffold_188_10
unknown

Not on your lists

13032..13352
DNA (321bp) protein (107aa)

This feature has no annotations

13_1_40cm_2_scaffold_188_11
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

13349..13684
DNA (336bp) protein (112aa)
Oxidoreductase, Gfo/Idh/MocA family n=2 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q08WZ1_STIAD
Predicted dehydrogenase {ECO:0000313|EMBL:CDM66525.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Gfo/Idh/MocA family oxidoreductase
13_1_40cm_2_scaffold_188_12
Oscillochloris trichoides, Oscillochloris, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

13648..14424
DNA (777bp) protein (259aa)
Oxidoreductase domain protein n=1 Tax=Oscillochloris trichoides DG-6 RepID=E1IFH4_9CHLR
Oxidoreductase domain protein {ECO:0000313|EMBL:EFO80084.1}; TaxID=765420 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Oscillochloridaceae; Oscillochloris.;" source="
Gfo/Idh/MocA family oxidoreductase
13_1_40cm_2_scaffold_188_13

Not on your lists

14429..15619
DNA (1191bp) protein (397aa)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570}; EC=1.17.1.2 {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570};; TaxI
4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=1 Tax=uncultured bacterium BAC-L1N9 RepID=Q4JIR7_9BACT
hydroxymethylbutenyl pyrophosphate reductase
13_1_40cm_2_scaffold_188_14
Pseudogulbenkiania sp. NH8B, Pseudogulbenkiania, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15644..19966
DNA (4323bp) protein (1441aa)
DEAD/H box helicase domain protein n=1 Tax=Pseudogulbenkiania sp. (strain NH8B) RepID=G2IVL6_PSEUL
DEAD/H box helicase domain protein {ECO:0000313|EMBL:BAK77559.1}; TaxID=748280 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Pseudogulbenkiania.;" source="Ps
DEAD/DEAH box helicase
13_1_40cm_2_scaffold_188_15
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

comp(19963..20499)
DNA (537bp) protein (179aa)
peptide methionine sulfoxide reductase (EC:1.8.4.11); K07304 peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] id=24524921 bin=RBG_19FT_COMBO_GAL15_69_19 species=Meiothermus ruber genus=Meiothermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
peptide methionine sulfoxide reductase (EC:1.8.4.11); K07304 peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
methionine sulfoxide reductase A (EC:1.8.4.11)
13_1_40cm_2_scaffold_188_16
unknown

Not on your lists

comp(20504..21286)
DNA (783bp) protein (261aa)

This feature has no annotations

13_1_40cm_2_scaffold_188_17
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21430..22407)
DNA (978bp) protein (326aa)
hypothetical protein n=1 Tax=Burkholderia sp. WSM4176 RepID=UPI000363A6AB
Uncharacterized protein {ECO:0000313|EMBL:KGT74371.1}; TaxID=375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japoni
hypothetical protein
13_1_40cm_2_scaffold_188_18
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(22407..22985)
DNA (579bp) protein (193aa)
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
13_1_40cm_2_scaffold_188_19
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(22982..25087)
DNA (2106bp) protein (702aa)
DNA polymerase III subunit alpha (EC:2.7.7.7); K14162 error-prone DNA polymerase [EC:2.7.7.7] Tax=RBG_16_Actinobacteria_67_10_curated
DNA polymerase III subunit alpha (EC:2.7.7.7)
DNA polymerase III alpha subunit n=1 Tax=uncultured bacterium W5-102b RepID=H9BWL6_9BACT
13_1_40cm_2_scaffold_188_20
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(25039..26244)
DNA (1206bp) protein (402aa)
DNA polymerase III subunit alpha (EC:2.7.7.7); K14162 error-prone DNA polymerase [EC:2.7.7.7] Tax=RBG_16_Actinobacteria_67_10_curated
DNA polymerase III subunit alpha (EC:2.7.7.7)
DNA polymerase III, alpha subunit n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C6C8_SPHTD
13_1_40cm_2_scaffold_188_21
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(26223..26510)
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C5S4_SPHTD
hypothetical protein Tax=RBG_16_Actinobacteria_67_10_curated
hypothetical protein
13_1_40cm_2_scaffold_188_22
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(26459..27718)
DNA (1260bp) protein (420aa)
DNA-directed DNA polymerase (EC:2.7.7.7); K14161 protein ImuB Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
DNA-directed DNA polymerase (EC:2.7.7.7)
DNA-directed DNA polymerase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C5S3_SPHTD
13_1_40cm_2_scaffold_188_23

Not on your lists

27801..28757
DNA (957bp) protein (319aa)
Conserved protein n=1 Tax=uncultured bacterium BAC-L1N9 RepID=Q4JIR8_9BACT
Conserved protein {ECO:0000313|EMBL:AHN97952.1}; TaxID=1447241 species="Bacteria; environmental samples.;" source="uncultured bacterium lac160.;"
hypothetical protein
13_1_40cm_2_scaffold_188_24
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(28754..29467)
DNA (714bp) protein (238aa)
Fe-S protein, radical SAM family n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IU25_KORVE
radical SAM domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Radical SAM domain protein
Displaying 24 items

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